RNA–Protein interactions for RNA: ENST00000508929.1

ABCC3-209, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 2

Gene ABCC3, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-209ENST00000508929 NISCHQ9Y2I1 1504 aa21.56■■□□□ 1.04
ABCC3-209ENST00000508929 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
ABCC3-209ENST00000508929 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
ABCC3-209ENST00000508929 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
ABCC3-209ENST00000508929 ABCC9O60706 1549 aa17.78■□□□□ 0.44
ABCC3-209ENST00000508929 MYO15BQ96JP2 1530 aa17.78■□□□□ 0.44
ABCC3-209ENST00000508929 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
ABCC3-209ENST00000508929 NACADO15069 1562 aa17.62■□□□□ 0.41
ABCC3-209ENST00000508929 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
ABCC3-209ENST00000508929 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
ABCC3-209ENST00000508929 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
ABCC3-209ENST00000508929 UNC13AQ9UPW8 1703 aa16.91■□□□□ 0.3
ABCC3-209ENST00000508929 BICRAQ9NZM4 1560 aa16.85■□□□□ 0.29
ABCC3-209ENST00000508929 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
ABCC3-209ENST00000508929 SUPT5HO00267 1087 aaKnown RBP16.75■□□□□ 0.27
ABCC3-209ENST00000508929 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
ABCC3-209ENST00000508929 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
ABCC3-209ENST00000508929 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
ABCC3-209ENST00000508929 MROH2BQ7Z745 1585 aa16.6■□□□□ 0.25
ABCC3-209ENST00000508929 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
ABCC3-209ENST00000508929 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
ABCC3-209ENST00000508929 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
ABCC3-209ENST00000508929 WIZO95785 1651 aa16.4■□□□□ 0.22
ABCC3-209ENST00000508929 EIF4G1Q04637 1599 aaKnown RBP16.36■□□□□ 0.21
ABCC3-209ENST00000508929 SMARCA2P51531 1590 aa16.35■□□□□ 0.21
ABCC3-209ENST00000508929 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
ABCC3-209ENST00000508929 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
ABCC3-209ENST00000508929 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
ABCC3-209ENST00000508929 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
ABCC3-209ENST00000508929 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
ABCC3-209ENST00000508929 CCDC88BA6NC98 1476 aa16.16■□□□□ 0.18
ABCC3-209ENST00000508929 CHIC1Q5VXU3 224 aa16.15■□□□□ 0.18
ABCC3-209ENST00000508929 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
ABCC3-209ENST00000508929 CFTRP13569 1480 aa15.86■□□□□ 0.13
ABCC3-209ENST00000508929 CADPSQ9ULU8 1353 aa15.85■□□□□ 0.13
ABCC3-209ENST00000508929 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
ABCC3-209ENST00000508929 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
ABCC3-209ENST00000508929 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
ABCC3-209ENST00000508929 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
ABCC3-209ENST00000508929 PRDM2Q13029 1718 aa15.64■□□□□ 0.09
ABCC3-209ENST00000508929 PDS5BQ9NTI5 1447 aa15.61■□□□□ 0.09
ABCC3-209ENST00000508929 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
ABCC3-209ENST00000508929 TOP2BQ02880 1626 aa15.57■□□□□ 0.08
ABCC3-209ENST00000508929 NESP48681 1621 aa15.57■□□□□ 0.08
ABCC3-209ENST00000508929 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
ABCC3-209ENST00000508929 EEA1Q15075 1411 aa15.55■□□□□ 0.08
ABCC3-209ENST00000508929 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
ABCC3-209ENST00000508929 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
ABCC3-209ENST00000508929 CUX1P39880 1505 aa15.53■□□□□ 0.08
ABCC3-209ENST00000508929 HRCP23327 699 aa15.52■□□□□ 0.08
ABCC3-209ENST00000508929 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
ABCC3-209ENST00000508929 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
ABCC3-209ENST00000508929 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
ABCC3-209ENST00000508929 SOGA1O94964 1423 aa15.43■□□□□ 0.06
ABCC3-209ENST00000508929 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
ABCC3-209ENST00000508929 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
ABCC3-209ENST00000508929 TOPBP1Q92547 1522 aa15.42■□□□□ 0.06
ABCC3-209ENST00000508929 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
ABCC3-209ENST00000508929 KIF27Q86VH2 1401 aa15.37■□□□□ 0.05
ABCC3-209ENST00000508929 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
ABCC3-209ENST00000508929 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
ABCC3-209ENST00000508929 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
ABCC3-209ENST00000508929 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
ABCC3-209ENST00000508929 DNAJC5Q9H3Z4 198 aa15.33■□□□□ 0.04
ABCC3-209ENST00000508929 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.04
ABCC3-209ENST00000508929 ERCC6Q03468 1493 aa15.3■□□□□ 0.04
ABCC3-209ENST00000508929 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
ABCC3-209ENST00000508929 TRIM26Q12899 539 aaPredicted RBP15.29■□□□□ 0.04
ABCC3-209ENST00000508929 CUX2O14529 1486 aa15.27■□□□□ 0.04
ABCC3-209ENST00000508929 WDR62O43379 1518 aa15.27■□□□□ 0.03
ABCC3-209ENST00000508929 IGF1RP08069 1367 aa15.24■□□□□ 0.03
ABCC3-209ENST00000508929 RAD54L2Q9Y4B4 1467 aa15.24■□□□□ 0.03
ABCC3-209ENST00000508929 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
ABCC3-209ENST00000508929 PRXQ9BXM0 1461 aa15.23■□□□□ 0.03
ABCC3-209ENST00000508929 KIF21BO75037 1637 aa15.23■□□□□ 0.03
ABCC3-209ENST00000508929 TNIKQ9UKE5 1360 aa15.23■□□□□ 0.03
ABCC3-209ENST00000508929 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
ABCC3-209ENST00000508929 ERICH3Q5RHP9 1530 aa15.19■□□□□ 0.02
ABCC3-209ENST00000508929 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
ABCC3-209ENST00000508929 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
ABCC3-209ENST00000508929 THOC2Q8NI27 1593 aaKnown RBP15.16■□□□□ 0.02
ABCC3-209ENST00000508929 CARMIL1Q5VZK9 1371 aa15.15■□□□□ 0.02
ABCC3-209ENST00000508929 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
ABCC3-209ENST00000508929 GAPVD1Q14C86 1478 aa15.14■□□□□ 0.01
ABCC3-209ENST00000508929 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
ABCC3-209ENST00000508929 RAPGEF2Q9Y4G8 1499 aa15.13■□□□□ 0.01
ABCC3-209ENST00000508929 ABCA5Q8WWZ7 1642 aa15.1■□□□□ 0.01
ABCC3-209ENST00000508929 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
ABCC3-209ENST00000508929 CUL7Q14999 1698 aa15.06■□□□□ 0
ABCC3-209ENST00000508929 GRIN2BQ13224 1484 aa15.06■□□□□ 0
ABCC3-209ENST00000508929 PPARGC1BQ86YN6 1023 aaKnown RBP15.05■□□□□ -0
ABCC3-209ENST00000508929 CEP162Q5TB80 1403 aa15.05■□□□□ -0
ABCC3-209ENST00000508929 AQRO60306 1485 aaKnown RBP eCLIP15.04■□□□□ -0
ABCC3-209ENST00000508929 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
ABCC3-209ENST00000508929 ZNF608Q9ULD9 1512 aaPredicted RBP15□□□□□ -0.01
ABCC3-209ENST00000508929 ZEB1P37275 1124 aaPredicted RBP14.98□□□□□ -0.01
ABCC3-209ENST00000508929 CLIP1P30622 1438 aa14.98□□□□□ -0.01
ABCC3-209ENST00000508929 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
ABCC3-209ENST00000508929 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
ABCC3-209ENST00000508929 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms