RNA–Protein interactions for RNA: ENST00000508707.5

APBB2-216, Transcript of amyloid beta precursor protein binding family B member 2, humanhuman

TSL 2

Gene APBB2, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB2-216ENST00000508707 NISCHQ9Y2I1 1504 aa47.91■■■■■ 5.26
APBB2-216ENST00000508707 CCDC180Q9P1Z9 1646 aa42.45■■■■■ 4.39
APBB2-216ENST00000508707 ABCC9O60706 1549 aa41.85■■■■■ 4.29
APBB2-216ENST00000508707 DCAF8L2P0C7V8 631 aa40.35■■■■■ 4.05
APBB2-216ENST00000508707 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
APBB2-216ENST00000508707 NACADO15069 1562 aa40.04■■■■■ 4
APBB2-216ENST00000508707 ZCCHC6Q5VYS8 1495 aaKnown RBP39.86■■■■□ 3.97
APBB2-216ENST00000508707 MYO15BQ96JP2 1530 aa39.74■■■■□ 3.95
APBB2-216ENST00000508707 DCAF1Q9Y4B6 1507 aa39.56■■■■□ 3.92
APBB2-216ENST00000508707 PABPN1Q86U42 306 aaKnown RBP eCLIP39.22■■■■□ 3.87
APBB2-216ENST00000508707 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
APBB2-216ENST00000508707 BICRAQ9NZM4 1560 aa38.88■■■■□ 3.81
APBB2-216ENST00000508707 SCRIBQ14160 1630 aa38.88■■■■□ 3.81
APBB2-216ENST00000508707 DNAJC5BQ9UF47 199 aa38.57■■■■□ 3.76
APBB2-216ENST00000508707 SHROOM4Q9ULL8 1493 aa38.39■■■■□ 3.74
APBB2-216ENST00000508707 EIF4G1Q04637 1599 aaKnown RBP37.88■■■■□ 3.65
APBB2-216ENST00000508707 CC2D2AQ9P2K1 1620 aa37.75■■■■□ 3.63
APBB2-216ENST00000508707 CECR2Q9BXF3 1484 aa37.58■■■■□ 3.61
APBB2-216ENST00000508707 SMARCA4P51532 1647 aa37.13■■■■□ 3.53
APBB2-216ENST00000508707 BAZ1AQ9NRL2 1556 aaPredicted RBP37.11■■■■□ 3.53
APBB2-216ENST00000508707 ATAD2BQ9ULI0 1458 aa37.04■■■■□ 3.52
APBB2-216ENST00000508707 NCAPD3P42695 1498 aa37.01■■■■□ 3.52
APBB2-216ENST00000508707 MROH2BQ7Z745 1585 aa36.95■■■■□ 3.51
APBB2-216ENST00000508707 SMARCA2P51531 1590 aa36.91■■■■□ 3.5
APBB2-216ENST00000508707 PEG3Q9GZU2 1588 aa36.74■■■■□ 3.47
APBB2-216ENST00000508707 HMGXB3Q12766 1538 aa36.72■■■■□ 3.47
APBB2-216ENST00000508707 BAZ1BQ9UIG0 1483 aaKnown RBP36.71■■■■□ 3.47
APBB2-216ENST00000508707 RSF1Q96T23 1441 aaPredicted RBP36.56■■■■□ 3.44
APBB2-216ENST00000508707 WIZO95785 1651 aa36.51■■■■□ 3.44
APBB2-216ENST00000508707 NESP48681 1621 aa36.18■■■■□ 3.38
APBB2-216ENST00000508707 TOP2AP11388 1531 aaKnown RBP36.1■■■■□ 3.37
APBB2-216ENST00000508707 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
APBB2-216ENST00000508707 CADPSQ9ULU8 1353 aa35.99■■■■□ 3.35
APBB2-216ENST00000508707 LAMC3Q9Y6N6 1575 aa35.96■■■■□ 3.35
APBB2-216ENST00000508707 PDS5BQ9NTI5 1447 aa35.83■■■■□ 3.33
APBB2-216ENST00000508707 CCDC88BA6NC98 1476 aa35.78■■■■□ 3.32
APBB2-216ENST00000508707 SUPT5HO00267 1087 aaKnown RBP35.77■■■■□ 3.32
APBB2-216ENST00000508707 CFTRP13569 1480 aa35.7■■■■□ 3.31
APBB2-216ENST00000508707 CUX2O14529 1486 aa35.6■■■■□ 3.29
APBB2-216ENST00000508707 KIF21AQ7Z4S6 1674 aa35.59■■■■□ 3.29
APBB2-216ENST00000508707 FANCD2Q9BXW9 1451 aa35.54■■■■□ 3.28
APBB2-216ENST00000508707 THOC2Q8NI27 1593 aaKnown RBP35.49■■■■□ 3.27
APBB2-216ENST00000508707 CEP164Q9UPV0 1460 aa35.47■■■■□ 3.27
APBB2-216ENST00000508707 MRC2Q9UBG0 1479 aa35.42■■■■□ 3.26
APBB2-216ENST00000508707 WDR62O43379 1518 aa35.25■■■■□ 3.23
APBB2-216ENST00000508707 PRDM2Q13029 1718 aa35.19■■■■□ 3.22
APBB2-216ENST00000508707 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
APBB2-216ENST00000508707 TOPBP1Q92547 1522 aa34.94■■■■□ 3.18
APBB2-216ENST00000508707 ABCC8Q09428 1581 aa34.91■■■■□ 3.18
APBB2-216ENST00000508707 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
APBB2-216ENST00000508707 DNAJC5Q9H3Z4 198 aa34.75■■■■□ 3.15
APBB2-216ENST00000508707 IFT140Q96RY7 1462 aa34.73■■■■□ 3.15
APBB2-216ENST00000508707 CUX1P39880 1505 aa34.65■■■■□ 3.14
APBB2-216ENST00000508707 POLA1P09884 1462 aaPredicted RBP34.64■■■■□ 3.14
APBB2-216ENST00000508707 ZNF608Q9ULD9 1512 aaPredicted RBP34.63■■■■□ 3.13
APBB2-216ENST00000508707 SOGA1O94964 1423 aa34.58■■■■□ 3.13
APBB2-216ENST00000508707 FGD5Q6ZNL6 1462 aa34.56■■■■□ 3.12
APBB2-216ENST00000508707 RAD54L2Q9Y4B4 1467 aa34.56■■■■□ 3.12
APBB2-216ENST00000508707 TARBP1Q13395 1621 aaKnown RBP34.49■■■■□ 3.11
APBB2-216ENST00000508707 AQRO60306 1485 aaKnown RBP eCLIP34.46■■■■□ 3.11
APBB2-216ENST00000508707 WRNQ14191 1432 aaPredicted RBP eCLIP34.46■■■■□ 3.11
APBB2-216ENST00000508707 TDRD9Q8NDG6 1382 aaKnown RBP34.43■■■■□ 3.1
APBB2-216ENST00000508707 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
APBB2-216ENST00000508707 OSCARQ8IYS5 282 aa34.31■■■■□ 3.08
APBB2-216ENST00000508707 SYNJ1O43426 1573 aa34.31■■■■□ 3.08
APBB2-216ENST00000508707 TOP2BQ02880 1626 aa34.29■■■■□ 3.08
APBB2-216ENST00000508707 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
APBB2-216ENST00000508707 ABCA10Q8WWZ4 1543 aa34.2■■■■□ 3.06
APBB2-216ENST00000508707 FBLN2P98095 1184 aa34.17■■■■□ 3.06
APBB2-216ENST00000508707 WDR97A6NE52 1622 aa34.14■■■■□ 3.06
APBB2-216ENST00000508707 GAPVD1Q14C86 1478 aa34.13■■■■□ 3.05
APBB2-216ENST00000508707 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
APBB2-216ENST00000508707 SNAPC4Q5SXM2 1469 aa34.08■■■■□ 3.05
APBB2-216ENST00000508707 CHMP7Q8WUX9 453 aaPredicted RBP34.03■■■■□ 3.04
APBB2-216ENST00000508707 MAGI1Q96QZ7 1491 aaPredicted RBP33.99■■■■□ 3.03
APBB2-216ENST00000508707 ABCA5Q8WWZ7 1642 aa33.98■■■■□ 3.03
APBB2-216ENST00000508707 CHD1O14646 1710 aa33.91■■■■□ 3.02
APBB2-216ENST00000508707 PBRM1Q86U86 1689 aa33.9■■■■□ 3.02
APBB2-216ENST00000508707 SYNJ2O15056 1496 aa33.88■■■■□ 3.01
APBB2-216ENST00000508707 ERICH3Q5RHP9 1530 aa33.76■■■■□ 3
APBB2-216ENST00000508707 TRIM41Q8WV44 630 aa33.75■■■□□ 2.99
APBB2-216ENST00000508707 KIF27Q86VH2 1401 aa33.75■■■□□ 2.99
APBB2-216ENST00000508707 FHAD1B1AJZ9 1412 aa33.73■■■□□ 2.99
APBB2-216ENST00000508707 ADAMTS12P58397 1594 aa33.68■■■□□ 2.98
APBB2-216ENST00000508707 IGF1RP08069 1367 aa33.68■■■□□ 2.98
APBB2-216ENST00000508707 GRIN2AQ12879 1464 aa33.66■■■□□ 2.98
APBB2-216ENST00000508707 ARHGEF11O15085 1522 aa33.6■■■□□ 2.97
APBB2-216ENST00000508707 CLASP1Q7Z460 1538 aa33.58■■■□□ 2.97
APBB2-216ENST00000508707 RIMBP3CA6NJZ7 1639 aa33.57■■■□□ 2.97
APBB2-216ENST00000508707 RIMBP3BA6NNM3 1639 aa33.57■■■□□ 2.97
APBB2-216ENST00000508707 RIMBP3Q9UFD9 1639 aa33.57■■■□□ 2.97
APBB2-216ENST00000508707 NUP160Q12769 1436 aa33.51■■■□□ 2.95
APBB2-216ENST00000508707 CYB5RLQ6IPT4 315 aa33.48■■■□□ 2.95
APBB2-216ENST00000508707 RUSC2Q8N2Y8 1516 aa33.47■■■□□ 2.95
APBB2-216ENST00000508707 CEP170Q5SW79 1584 aa33.47■■■□□ 2.95
APBB2-216ENST00000508707 CARMIL1Q5VZK9 1371 aa33.47■■■□□ 2.95
APBB2-216ENST00000508707 CUL7Q14999 1698 aa33.38■■■□□ 2.93
APBB2-216ENST00000508707 ARAP1Q96P48 1450 aa33.35■■■□□ 2.93
APBB2-216ENST00000508707 JPH4Q96JJ6 628 aa33.32■■■□□ 2.92
APBB2-216ENST00000508707 CHIC1Q5VXU3 224 aa33.3■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms