RNA–Protein interactions for RNA: ENST00000508478.1

RNF44-205, Transcript of ring finger protein 44, humanhuman

TSL 3

Gene RNF44, Length 662 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-205ENST00000508478 NISCHQ9Y2I1 1504 aa38.91■■■■□ 3.82
RNF44-205ENST00000508478 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
RNF44-205ENST00000508478 ABCC9O60706 1549 aa33.18■■■□□ 2.9
RNF44-205ENST00000508478 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
RNF44-205ENST00000508478 NACADO15069 1562 aa32.32■■■□□ 2.76
RNF44-205ENST00000508478 MYO15BQ96JP2 1530 aa32.3■■■□□ 2.76
RNF44-205ENST00000508478 DCAF1Q9Y4B6 1507 aa32.3■■■□□ 2.76
RNF44-205ENST00000508478 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
RNF44-205ENST00000508478 RB1CC1Q8TDY2 1594 aa32.24■■■□□ 2.75
RNF44-205ENST00000508478 UNC13AQ9UPW8 1703 aa31.49■■■□□ 2.63
RNF44-205ENST00000508478 SCRIBQ14160 1630 aa31.37■■■□□ 2.61
RNF44-205ENST00000508478 BICRAQ9NZM4 1560 aa31.15■■■□□ 2.58
RNF44-205ENST00000508478 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.56
RNF44-205ENST00000508478 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.56
RNF44-205ENST00000508478 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.45
RNF44-205ENST00000508478 CECR2Q9BXF3 1484 aa30.18■■■□□ 2.42
RNF44-205ENST00000508478 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
RNF44-205ENST00000508478 SMARCA4P51532 1647 aa30.11■■■□□ 2.41
RNF44-205ENST00000508478 CC2D2AQ9P2K1 1620 aa30.1■■■□□ 2.41
RNF44-205ENST00000508478 DNAJC5BQ9UF47 199 aa30■■■□□ 2.39
RNF44-205ENST00000508478 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
RNF44-205ENST00000508478 SMARCA2P51531 1590 aa29.87■■■□□ 2.37
RNF44-205ENST00000508478 PEG3Q9GZU2 1588 aa29.86■■■□□ 2.37
RNF44-205ENST00000508478 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
RNF44-205ENST00000508478 NCAPD3P42695 1498 aa29.77■■■□□ 2.36
RNF44-205ENST00000508478 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
RNF44-205ENST00000508478 HMGXB3Q12766 1538 aa29.69■■■□□ 2.34
RNF44-205ENST00000508478 WIZO95785 1651 aa29.66■■■□□ 2.34
RNF44-205ENST00000508478 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
RNF44-205ENST00000508478 TOP2AP11388 1531 aaKnown RBP29.4■■■□□ 2.3
RNF44-205ENST00000508478 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
RNF44-205ENST00000508478 CCDC88BA6NC98 1476 aa29.03■■■□□ 2.24
RNF44-205ENST00000508478 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
RNF44-205ENST00000508478 CADPSQ9ULU8 1353 aa28.91■■■□□ 2.22
RNF44-205ENST00000508478 CFTRP13569 1480 aa28.83■■■□□ 2.21
RNF44-205ENST00000508478 NESP48681 1621 aa28.81■■■□□ 2.2
RNF44-205ENST00000508478 PRDM2Q13029 1718 aa28.76■■■□□ 2.19
RNF44-205ENST00000508478 PDS5BQ9NTI5 1447 aa28.73■■■□□ 2.19
RNF44-205ENST00000508478 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
RNF44-205ENST00000508478 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.16
RNF44-205ENST00000508478 FANCD2Q9BXW9 1451 aa28.56■■■□□ 2.16
RNF44-205ENST00000508478 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
RNF44-205ENST00000508478 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
RNF44-205ENST00000508478 MRC2Q9UBG0 1479 aa28.36■■■□□ 2.13
RNF44-205ENST00000508478 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
RNF44-205ENST00000508478 WDR62O43379 1518 aa28.28■■■□□ 2.12
RNF44-205ENST00000508478 CUX2O14529 1486 aa28.22■■■□□ 2.11
RNF44-205ENST00000508478 URB2Q14146 1524 aaKnown RBP28.22■■■□□ 2.11
RNF44-205ENST00000508478 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
RNF44-205ENST00000508478 TOPBP1Q92547 1522 aa28.15■■■□□ 2.1
RNF44-205ENST00000508478 WRNQ14191 1432 aaPredicted RBP eCLIP28.09■■■□□ 2.09
RNF44-205ENST00000508478 CUX1P39880 1505 aa28.07■■■□□ 2.08
RNF44-205ENST00000508478 BIVM-ERCC5R4GMW8 1640 aa28.02■■■□□ 2.08
RNF44-205ENST00000508478 TOP2BQ02880 1626 aa28.01■■■□□ 2.07
RNF44-205ENST00000508478 SYNJ1O43426 1573 aa27.95■■■□□ 2.07
RNF44-205ENST00000508478 POLA1P09884 1462 aaPredicted RBP27.93■■■□□ 2.06
RNF44-205ENST00000508478 FGD5Q6ZNL6 1462 aa27.92■■■□□ 2.06
RNF44-205ENST00000508478 IFT140Q96RY7 1462 aa27.9■■■□□ 2.06
RNF44-205ENST00000508478 SOGA1O94964 1423 aa27.84■■■□□ 2.05
RNF44-205ENST00000508478 TARBP1Q13395 1621 aaKnown RBP27.83■■■□□ 2.05
RNF44-205ENST00000508478 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
RNF44-205ENST00000508478 WDR97A6NE52 1622 aa27.75■■■□□ 2.03
RNF44-205ENST00000508478 TRIM41Q8WV44 630 aa27.72■■■□□ 2.03
RNF44-205ENST00000508478 ABCA10Q8WWZ4 1543 aa27.72■■■□□ 2.03
RNF44-205ENST00000508478 ZNF608Q9ULD9 1512 aaPredicted RBP27.64■■■□□ 2.02
RNF44-205ENST00000508478 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
RNF44-205ENST00000508478 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
RNF44-205ENST00000508478 TDRD9Q8NDG6 1382 aaKnown RBP27.58■■■□□ 2.01
RNF44-205ENST00000508478 ABCA5Q8WWZ7 1642 aa27.56■■■□□ 2
RNF44-205ENST00000508478 AQRO60306 1485 aaKnown RBP eCLIP27.56■■■□□ 23e-7■■■□□ 16
RNF44-205ENST00000508478 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
RNF44-205ENST00000508478 KIF27Q86VH2 1401 aa27.5■■□□□ 1.99
RNF44-205ENST00000508478 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
RNF44-205ENST00000508478 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
RNF44-205ENST00000508478 ERICH3Q5RHP9 1530 aa27.42■■□□□ 1.98
RNF44-205ENST00000508478 MAGI1Q96QZ7 1491 aaPredicted RBP27.39■■□□□ 1.98
RNF44-205ENST00000508478 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
RNF44-205ENST00000508478 EEA1Q15075 1411 aa27.31■■□□□ 1.96
RNF44-205ENST00000508478 CUL7Q14999 1698 aa27.28■■□□□ 1.96
RNF44-205ENST00000508478 IGF1RP08069 1367 aa27.28■■□□□ 1.96
RNF44-205ENST00000508478 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
RNF44-205ENST00000508478 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
RNF44-205ENST00000508478 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
RNF44-205ENST00000508478 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
RNF44-205ENST00000508478 CHD1O14646 1710 aa27.21■■□□□ 1.95
RNF44-205ENST00000508478 CHMP7Q8WUX9 453 aaPredicted RBP27.2■■□□□ 1.94
RNF44-205ENST00000508478 FBLN2P98095 1184 aa27.16■■□□□ 1.94
RNF44-205ENST00000508478 CARMIL1Q5VZK9 1371 aa27.15■■□□□ 1.94
RNF44-205ENST00000508478 CSRNP3Q8WYN3 585 aa27.14■■□□□ 1.94
RNF44-205ENST00000508478 GRIN2AQ12879 1464 aa27.12■■□□□ 1.93
RNF44-205ENST00000508478 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
RNF44-205ENST00000508478 RAPGEF2Q9Y4G8 1499 aa27.06■■□□□ 1.92
RNF44-205ENST00000508478 PRXQ9BXM0 1461 aa27.04■■□□□ 1.92
RNF44-205ENST00000508478 FAM9AQ8IZU1 332 aaPredicted RBP27.02■■□□□ 1.92
RNF44-205ENST00000508478 NUP160Q12769 1436 aa26.98■■□□□ 1.91
RNF44-205ENST00000508478 KIF21BO75037 1637 aa26.95■■□□□ 1.91
RNF44-205ENST00000508478 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
RNF44-205ENST00000508478 CLASP1Q7Z460 1538 aa26.91■■□□□ 1.9
RNF44-205ENST00000508478 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
RNF44-205ENST00000508478 CTTNBP2Q8WZ74 1663 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms