RNA–Protein interactions for RNA: ENST00000508385.5

SH3BP2-213, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-213ENST00000508385 NISCHQ9Y2I1 1504 aa36.26■■■■□ 3.4
SH3BP2-213ENST00000508385 ABCC9O60706 1549 aa32.56■■■□□ 2.8
SH3BP2-213ENST00000508385 CCDC180Q9P1Z9 1646 aa32.47■■■□□ 2.79
SH3BP2-213ENST00000508385 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.54
SH3BP2-213ENST00000508385 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
SH3BP2-213ENST00000508385 NACADO15069 1562 aa30.72■■■□□ 2.51
SH3BP2-213ENST00000508385 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
SH3BP2-213ENST00000508385 PABPN1Q86U42 306 aaKnown RBP eCLIP30.35■■■□□ 2.45
SH3BP2-213ENST00000508385 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
SH3BP2-213ENST00000508385 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
SH3BP2-213ENST00000508385 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
SH3BP2-213ENST00000508385 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
SH3BP2-213ENST00000508385 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
SH3BP2-213ENST00000508385 SCRIBQ14160 1630 aa29.7■■■□□ 2.34
SH3BP2-213ENST00000508385 SHROOM4Q9ULL8 1493 aa29.61■■■□□ 2.33
SH3BP2-213ENST00000508385 CC2D2AQ9P2K1 1620 aa29.35■■■□□ 2.29
SH3BP2-213ENST00000508385 CECR2Q9BXF3 1484 aa29.31■■■□□ 2.28
SH3BP2-213ENST00000508385 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
SH3BP2-213ENST00000508385 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
SH3BP2-213ENST00000508385 ATAD2BQ9ULI0 1458 aa28.32■■■□□ 2.12
SH3BP2-213ENST00000508385 SMARCA4P51532 1647 aa28.28■■■□□ 2.12
SH3BP2-213ENST00000508385 SMARCA2P51531 1590 aa28.23■■■□□ 2.11
SH3BP2-213ENST00000508385 HMGXB3Q12766 1538 aa28.17■■■□□ 2.1
SH3BP2-213ENST00000508385 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
SH3BP2-213ENST00000508385 ERCC6Q03468 1493 aa28.15■■■□□ 2.1
SH3BP2-213ENST00000508385 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.09
SH3BP2-213ENST00000508385 CUX2O14529 1486 aa28■■■□□ 2.07
SH3BP2-213ENST00000508385 NESP48681 1621 aa27.96■■■□□ 2.07
SH3BP2-213ENST00000508385 MROH2BQ7Z745 1585 aa27.96■■■□□ 2.07
SH3BP2-213ENST00000508385 PEG3Q9GZU2 1588 aa27.95■■■□□ 2.07
SH3BP2-213ENST00000508385 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
SH3BP2-213ENST00000508385 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
SH3BP2-213ENST00000508385 THOC2Q8NI27 1593 aaKnown RBP27.63■■■□□ 2.01
SH3BP2-213ENST00000508385 PDS5BQ9NTI5 1447 aa27.61■■■□□ 2.01
SH3BP2-213ENST00000508385 WIZO95785 1651 aa27.61■■■□□ 2.01
SH3BP2-213ENST00000508385 CADPSQ9ULU8 1353 aa27.55■■■□□ 2
SH3BP2-213ENST00000508385 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
SH3BP2-213ENST00000508385 RSF1Q96T23 1441 aaPredicted RBP27.4■■□□□ 1.98
SH3BP2-213ENST00000508385 MRC2Q9UBG0 1479 aa27.37■■□□□ 1.97
SH3BP2-213ENST00000508385 TOP2AP11388 1531 aaKnown RBP27.28■■□□□ 1.96
SH3BP2-213ENST00000508385 CEP164Q9UPV0 1460 aa27.28■■□□□ 1.96
SH3BP2-213ENST00000508385 WDR62O43379 1518 aa27.26■■□□□ 1.96
SH3BP2-213ENST00000508385 FANCD2Q9BXW9 1451 aa27.25■■□□□ 1.95
SH3BP2-213ENST00000508385 CFTRP13569 1480 aa27.22■■□□□ 1.95
SH3BP2-213ENST00000508385 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
SH3BP2-213ENST00000508385 CCDC88BA6NC98 1476 aa26.98■■□□□ 1.91
SH3BP2-213ENST00000508385 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
SH3BP2-213ENST00000508385 PRDM2Q13029 1718 aa26.85■■□□□ 1.89
SH3BP2-213ENST00000508385 OSCARQ8IYS5 282 aa26.76■■□□□ 1.87
SH3BP2-213ENST00000508385 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
SH3BP2-213ENST00000508385 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
SH3BP2-213ENST00000508385 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
SH3BP2-213ENST00000508385 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
SH3BP2-213ENST00000508385 DNMBPQ6XZF7 1577 aa26.62■■□□□ 1.85
SH3BP2-213ENST00000508385 EIF4G3O43432 1585 aaKnown RBP26.52■■□□□ 1.84
SH3BP2-213ENST00000508385 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.83
SH3BP2-213ENST00000508385 POLA1P09884 1462 aaPredicted RBP26.45■■□□□ 1.82
SH3BP2-213ENST00000508385 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
SH3BP2-213ENST00000508385 RAD54L2Q9Y4B4 1467 aa26.38■■□□□ 1.81
SH3BP2-213ENST00000508385 RIMBP3CA6NJZ7 1639 aa26.37■■□□□ 1.81
SH3BP2-213ENST00000508385 RIMBP3BA6NNM3 1639 aa26.37■■□□□ 1.81
SH3BP2-213ENST00000508385 RIMBP3Q9UFD9 1639 aa26.37■■□□□ 1.81
SH3BP2-213ENST00000508385 SOGA1O94964 1423 aa26.35■■□□□ 1.81
SH3BP2-213ENST00000508385 FBLN2P98095 1184 aa26.35■■□□□ 1.81
SH3BP2-213ENST00000508385 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
SH3BP2-213ENST00000508385 ARHGEF11O15085 1522 aa26.32■■□□□ 1.8
SH3BP2-213ENST00000508385 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
SH3BP2-213ENST00000508385 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
SH3BP2-213ENST00000508385 CUX1P39880 1505 aa26.28■■□□□ 1.8
SH3BP2-213ENST00000508385 CHD1O14646 1710 aa26.27■■□□□ 1.8
SH3BP2-213ENST00000508385 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.78
SH3BP2-213ENST00000508385 CYB5RLQ6IPT4 315 aa26.17■■□□□ 1.78
SH3BP2-213ENST00000508385 WDR97A6NE52 1622 aa26.15■■□□□ 1.78
SH3BP2-213ENST00000508385 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
SH3BP2-213ENST00000508385 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
SH3BP2-213ENST00000508385 MAGI1Q96QZ7 1491 aaPredicted RBP26.1■■□□□ 1.77
SH3BP2-213ENST00000508385 ARAP1Q96P48 1450 aa26.07■■□□□ 1.76
SH3BP2-213ENST00000508385 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
SH3BP2-213ENST00000508385 SYNJ2O15056 1496 aa26.02■■□□□ 1.76
SH3BP2-213ENST00000508385 SYNJ1O43426 1573 aa26.01■■□□□ 1.75
SH3BP2-213ENST00000508385 CLASP1Q7Z460 1538 aa25.99■■□□□ 1.75
SH3BP2-213ENST00000508385 ABCA10Q8WWZ4 1543 aa25.98■■□□□ 1.75
SH3BP2-213ENST00000508385 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
SH3BP2-213ENST00000508385 WRNQ14191 1432 aaPredicted RBP eCLIP25.92■■□□□ 1.74
SH3BP2-213ENST00000508385 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
SH3BP2-213ENST00000508385 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
SH3BP2-213ENST00000508385 TOP2BQ02880 1626 aa25.83■■□□□ 1.73
SH3BP2-213ENST00000508385 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
SH3BP2-213ENST00000508385 GRIN2AQ12879 1464 aa25.78■■□□□ 1.72
SH3BP2-213ENST00000508385 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
SH3BP2-213ENST00000508385 FHAD1B1AJZ9 1412 aa25.69■■□□□ 1.7
SH3BP2-213ENST00000508385 CEP170Q5SW79 1584 aa25.66■■□□□ 1.7
SH3BP2-213ENST00000508385 NUP160Q12769 1436 aa25.66■■□□□ 1.7
SH3BP2-213ENST00000508385 ERICH3Q5RHP9 1530 aa25.65■■□□□ 1.7
SH3BP2-213ENST00000508385 ERCC6L2Q5T890 1561 aa25.62■■□□□ 1.69
SH3BP2-213ENST00000508385 SHROOM2Q13796 1616 aa25.5■■□□□ 1.67
SH3BP2-213ENST00000508385 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
SH3BP2-213ENST00000508385 JPH4Q96JJ6 628 aa25.43■■□□□ 1.66
SH3BP2-213ENST00000508385 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
SH3BP2-213ENST00000508385 KIF27Q86VH2 1401 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms