RNA–Protein interactions for RNA: ENST00000508003.1

HSPA9-210, Transcript of heat shock protein family A (Hsp70) member 9, humanhuman

TSL 2

Gene HSPA9, Length 582 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA9-210ENST00000508003 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.441e-323■■■■■ 142
HSPA9-210ENST00000508003 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.93□□□□□ -0.661e-323■■■■■ 65.1
HSPA9-210ENST00000508003 NIPBLQ6KC79 2804 aaeCLIP9.98□□□□□ -0.816e-32■■■■■ 43.7
HSPA9-210ENST00000508003 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.28□□□□□ -0.62e-17■■■■■ 39.9
HSPA9-210ENST00000508003 AATFQ9NY61 560 aaKnown RBP eCLIP13.68□□□□□ -0.222e-24■■■■■ 30.9
HSPA9-210ENST00000508003 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.071e-323■■■■■ 30.9
HSPA9-210ENST00000508003 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.463e-9■■■■■ 29.4
HSPA9-210ENST00000508003 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.6□□□□□ -0.713e-6■■■■□ 23.9
HSPA9-210ENST00000508003 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.38□□□□□ -0.751e-323■■■■□ 22.8
HSPA9-210ENST00000508003 SMNDC1O75940 238 aaKnown RBP eCLIP10.13□□□□□ -0.791e-323■■■■□ 21.5
HSPA9-210ENST00000508003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■■■□ 20.2
HSPA9-210ENST00000508003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.66□□□□□ -0.225e-6■■■■□ 19.4
HSPA9-210ENST00000508003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.65□□□□□ -0.382e-8■■■□□ 19.1
HSPA9-210ENST00000508003 DKC1O60832 514 aaKnown RBP eCLIP12.66□□□□□ -0.383e-26■■■□□ 17.8
HSPA9-210ENST00000508003 FMR1Q06787 632 aaKnown RBP eCLIP14□□□□□ -0.171e-6■■■□□ 17.4
HSPA9-210ENST00000508003 RPS3P23396 243 aaKnown RBP eCLIP10.9□□□□□ -0.663e-8■■■□□ 15.8
HSPA9-210ENST00000508003 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.53□□□□□ -0.885e-9■■■□□ 15.2
HSPA9-210ENST00000508003 TIA1P31483 386 aaKnown RBP eCLIP10.38□□□□□ -0.751e-13■■□□□ 13.7
HSPA9-210ENST00000508003 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.92□□□□□ -0.341e-84■■□□□ 13.4
HSPA9-210ENST00000508003 SF3B1O75533 1304 aaKnown RBP eCLIP12.32□□□□□ -0.446e-6■■□□□ 13.4
HSPA9-210ENST00000508003 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.312e-30■■□□□ 13.2
HSPA9-210ENST00000508003 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.88□□□□□ -0.519e-22■■□□□ 12.7
HSPA9-210ENST00000508003 G3BP1Q13283 466 aaKnown RBP eCLIP13.92□□□□□ -0.186e-8■■□□□ 12.7
HSPA9-210ENST00000508003 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.81■□□□□ 0.281e-39■■□□□ 12.6
HSPA9-210ENST00000508003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.53■□□□□ 0.721e-9■■□□□ 12.3
HSPA9-210ENST00000508003 FXR1P51114 621 aaKnown RBP eCLIP13.49□□□□□ -0.251e-9■■□□□ 12.3
HSPA9-210ENST00000508003 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.05□□□□□ -0.646e-19■■□□□ 12.2
HSPA9-210ENST00000508003 GPKOWQ92917 476 aaPredicted RBP eCLIP12.9□□□□□ -0.346e-7■■□□□ 11.6
HSPA9-210ENST00000508003 PTBP1P26599 531 aaKnown RBP eCLIP8.58□□□□□ -1.044e-65■□□□□ 11.2
HSPA9-210ENST00000508003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.24■□□□□ 0.035e-12■□□□□ 11.1
HSPA9-210ENST00000508003 EFTUD2Q15029 972 aaKnown RBP eCLIP10.62□□□□□ -0.711e-7■□□□□ 10.7
HSPA9-210ENST00000508003 TRA2AQ13595 282 aaKnown RBP eCLIP11.08□□□□□ -0.641e-20■□□□□ 10.6
HSPA9-210ENST00000508003 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.42e-15■□□□□ 10.5
HSPA9-210ENST00000508003 TROVE2P10155 538 aaKnown RBP eCLIP10.03□□□□□ -0.81e-323■□□□□ 10
HSPA9-210ENST00000508003 SF3B4Q15427 424 aaKnown RBP eCLIP10.31□□□□□ -0.765e-9■□□□□ 9.8
HSPA9-210ENST00000508003 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.756e-10■□□□□ 9.6
HSPA9-210ENST00000508003 SSBP05455 408 aaKnown RBP eCLIP12.42□□□□□ -0.429e-12■□□□□ 9.3
HSPA9-210ENST00000508003 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.51□□□□□ -0.571e-15■□□□□ 9.3
HSPA9-210ENST00000508003 ZNF622Q969S3 477 aaKnown RBP eCLIP14.6□□□□□ -0.072e-13■□□□□ 9.1
HSPA9-210ENST00000508003 RBM15Q96T37 977 aaKnown RBP eCLIP11.22□□□□□ -0.613e-6■□□□□ 8.9
HSPA9-210ENST00000508003 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.51□□□□□ -0.571e-87■□□□□ 8.6
HSPA9-210ENST00000508003 SLBPQ14493 270 aaKnown RBP eCLIP10.62□□□□□ -0.716e-9■□□□□ 8.6
HSPA9-210ENST00000508003 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.64□□□□□ -0.237e-14■□□□□ 8.5
HSPA9-210ENST00000508003 PCBP1Q15365 356 aaKnown RBP eCLIP12.51□□□□□ -0.411e-8■□□□□ 8.2
Retrieved 44 of 44 RNA–protein pairs in 11.2 ms