RNA–Protein interactions for RNA: ENST00000507909.1

SRPK1-209, Transcript of SRSF protein kinase 1, humanhuman

TSL 4

Gene SRPK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-209ENST00000507909 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
SRPK1-209ENST00000507909 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
SRPK1-209ENST00000507909 ABCC9O60706 1549 aa19.71■□□□□ 0.75
SRPK1-209ENST00000507909 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
SRPK1-209ENST00000507909 DCAF1Q9Y4B6 1507 aa19.23■□□□□ 0.67
SRPK1-209ENST00000507909 NACADO15069 1562 aa19.2■□□□□ 0.66
SRPK1-209ENST00000507909 MYO15BQ96JP2 1530 aa19.2■□□□□ 0.66
SRPK1-209ENST00000507909 DCAF8L2P0C7V8 631 aa19.19■□□□□ 0.66
SRPK1-209ENST00000507909 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.65
SRPK1-209ENST00000507909 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
SRPK1-209ENST00000507909 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
SRPK1-209ENST00000507909 BICRAQ9NZM4 1560 aa18.53■□□□□ 0.56
SRPK1-209ENST00000507909 SHROOM4Q9ULL8 1493 aa18.47■□□□□ 0.55
SRPK1-209ENST00000507909 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
SRPK1-209ENST00000507909 EIF4G1Q04637 1599 aaKnown RBP18.03■□□□□ 0.48
SRPK1-209ENST00000507909 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
SRPK1-209ENST00000507909 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
SRPK1-209ENST00000507909 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
SRPK1-209ENST00000507909 CC2D2AQ9P2K1 1620 aa17.87■□□□□ 0.45
SRPK1-209ENST00000507909 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
SRPK1-209ENST00000507909 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
SRPK1-209ENST00000507909 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
SRPK1-209ENST00000507909 PEG3Q9GZU2 1588 aa17.77■□□□□ 0.44
SRPK1-209ENST00000507909 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
SRPK1-209ENST00000507909 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
SRPK1-209ENST00000507909 WIZO95785 1651 aa17.7■□□□□ 0.42
SRPK1-209ENST00000507909 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
SRPK1-209ENST00000507909 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
SRPK1-209ENST00000507909 BAZ1BQ9UIG0 1483 aaKnown RBP17.63■□□□□ 0.41
SRPK1-209ENST00000507909 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
SRPK1-209ENST00000507909 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
SRPK1-209ENST00000507909 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
SRPK1-209ENST00000507909 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
SRPK1-209ENST00000507909 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
SRPK1-209ENST00000507909 CFTRP13569 1480 aa17.16■□□□□ 0.34
SRPK1-209ENST00000507909 NESP48681 1621 aa17.15■□□□□ 0.34
SRPK1-209ENST00000507909 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
SRPK1-209ENST00000507909 PDS5BQ9NTI5 1447 aa17.06■□□□□ 0.32
SRPK1-209ENST00000507909 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
SRPK1-209ENST00000507909 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
SRPK1-209ENST00000507909 KIF21AQ7Z4S6 1674 aa16.99■□□□□ 0.31
SRPK1-209ENST00000507909 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
SRPK1-209ENST00000507909 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
SRPK1-209ENST00000507909 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
SRPK1-209ENST00000507909 WDR62O43379 1518 aa16.8■□□□□ 0.28
SRPK1-209ENST00000507909 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
SRPK1-209ENST00000507909 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
SRPK1-209ENST00000507909 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
SRPK1-209ENST00000507909 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
SRPK1-209ENST00000507909 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
SRPK1-209ENST00000507909 CUX1P39880 1505 aa16.75■□□□□ 0.27
SRPK1-209ENST00000507909 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
SRPK1-209ENST00000507909 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
SRPK1-209ENST00000507909 CUX2O14529 1486 aa16.71■□□□□ 0.27
SRPK1-209ENST00000507909 SYNJ1O43426 1573 aa16.71■□□□□ 0.27
SRPK1-209ENST00000507909 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.25
SRPK1-209ENST00000507909 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
SRPK1-209ENST00000507909 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
SRPK1-209ENST00000507909 SOGA1O94964 1423 aa16.56■□□□□ 0.24
SRPK1-209ENST00000507909 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
SRPK1-209ENST00000507909 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
SRPK1-209ENST00000507909 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
SRPK1-209ENST00000507909 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
SRPK1-209ENST00000507909 WDR97A6NE52 1622 aa16.52■□□□□ 0.23
SRPK1-209ENST00000507909 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
SRPK1-209ENST00000507909 ZNF608Q9ULD9 1512 aaPredicted RBP16.46■□□□□ 0.23
SRPK1-209ENST00000507909 EIF4G3O43432 1585 aaKnown RBP16.44■□□□□ 0.22
SRPK1-209ENST00000507909 ABCA5Q8WWZ7 1642 aa16.43■□□□□ 0.22
SRPK1-209ENST00000507909 TDRD9Q8NDG6 1382 aaKnown RBP16.41■□□□□ 0.22
SRPK1-209ENST00000507909 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.223e-8■■□□□ 14
SRPK1-209ENST00000507909 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
SRPK1-209ENST00000507909 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
SRPK1-209ENST00000507909 PBRM1Q86U86 1689 aa16.37■□□□□ 0.21
SRPK1-209ENST00000507909 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
SRPK1-209ENST00000507909 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
SRPK1-209ENST00000507909 EEA1Q15075 1411 aa16.31■□□□□ 0.2
SRPK1-209ENST00000507909 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
SRPK1-209ENST00000507909 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
SRPK1-209ENST00000507909 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
SRPK1-209ENST00000507909 IGF1RP08069 1367 aa16.26■□□□□ 0.19
SRPK1-209ENST00000507909 CUL7Q14999 1698 aa16.26■□□□□ 0.19
SRPK1-209ENST00000507909 ADAMTS12P58397 1594 aa16.25■□□□□ 0.19
SRPK1-209ENST00000507909 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
SRPK1-209ENST00000507909 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
SRPK1-209ENST00000507909 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
SRPK1-209ENST00000507909 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
SRPK1-209ENST00000507909 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
SRPK1-209ENST00000507909 CHD1O14646 1710 aa16.18■□□□□ 0.18
SRPK1-209ENST00000507909 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
SRPK1-209ENST00000507909 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
SRPK1-209ENST00000507909 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
SRPK1-209ENST00000507909 RAPGEF2Q9Y4G8 1499 aa16.14■□□□□ 0.17
SRPK1-209ENST00000507909 FBLN2P98095 1184 aa16.13■□□□□ 0.17
SRPK1-209ENST00000507909 KIF21BO75037 1637 aa16.12■□□□□ 0.17
SRPK1-209ENST00000507909 NUP160Q12769 1436 aa16.06■□□□□ 0.16
SRPK1-209ENST00000507909 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
SRPK1-209ENST00000507909 OSCARQ8IYS5 282 aa16.04■□□□□ 0.16
SRPK1-209ENST00000507909 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
SRPK1-209ENST00000507909 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
SRPK1-209ENST00000507909 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms