RNA–Protein interactions for RNA: ENST00000507699.1

PALLD-208, Transcript of palladin, cytoskeletal associated protein, humanhuman

TSL 1 (best)

Gene PALLD, Length 3,829 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALLD-208ENST00000507699 NISCHQ9Y2I1 1504 aa11.94□□□□□ -0.5
PALLD-208ENST00000507699 DCAF8L2P0C7V8 631 aa11.22□□□□□ -0.61
PALLD-208ENST00000507699 AEBP2Q6ZN18 517 aaPredicted RBP10.59□□□□□ -0.71
PALLD-208ENST00000507699 ABCC9O60706 1549 aa10.54□□□□□ -0.72
PALLD-208ENST00000507699 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
PALLD-208ENST00000507699 CCDC180Q9P1Z9 1646 aa10.18□□□□□ -0.78
PALLD-208ENST00000507699 PABPN1Q86U42 306 aaKnown RBP eCLIP10.16□□□□□ -0.78
PALLD-208ENST00000507699 SUPT5HO00267 1087 aaKnown RBP10.16□□□□□ -0.78
PALLD-208ENST00000507699 RB1CC1Q8TDY2 1594 aa9.88□□□□□ -0.83
PALLD-208ENST00000507699 ZCCHC6Q5VYS8 1495 aaKnown RBP9.87□□□□□ -0.83
PALLD-208ENST00000507699 NACADO15069 1562 aa9.8□□□□□ -0.84
PALLD-208ENST00000507699 SCRIBQ14160 1630 aa9.8□□□□□ -0.84
PALLD-208ENST00000507699 CHIC1Q5VXU3 224 aa9.64□□□□□ -0.87
PALLD-208ENST00000507699 DCAF1Q9Y4B6 1507 aa9.6□□□□□ -0.87
PALLD-208ENST00000507699 EHMT2Q96KQ7 1210 aa9.59□□□□□ -0.87
PALLD-208ENST00000507699 MYO15BQ96JP2 1530 aa9.51□□□□□ -0.89
PALLD-208ENST00000507699 FAM9AQ8IZU1 332 aaPredicted RBP9.51□□□□□ -0.89
PALLD-208ENST00000507699 TRIM41Q8WV44 630 aa9.47□□□□□ -0.89
PALLD-208ENST00000507699 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.9
PALLD-208ENST00000507699 RANGAP1P46060 587 aaPredicted RBP9.39□□□□□ -0.91
PALLD-208ENST00000507699 BAZ1BQ9UIG0 1483 aaKnown RBP9.35□□□□□ -0.91
PALLD-208ENST00000507699 DNAJC5BQ9UF47 199 aa9.33□□□□□ -0.92
PALLD-208ENST00000507699 FBLN2P98095 1184 aa9.32□□□□□ -0.92
PALLD-208ENST00000507699 BAZ1AQ9NRL2 1556 aaPredicted RBP9.31□□□□□ -0.92
PALLD-208ENST00000507699 RSF1Q96T23 1441 aaPredicted RBP9.31□□□□□ -0.92
PALLD-208ENST00000507699 TTBK1Q5TCY1 1321 aaPredicted RBP9.29□□□□□ -0.92
PALLD-208ENST00000507699 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
PALLD-208ENST00000507699 ERCC6Q03468 1493 aa9.27□□□□□ -0.93
PALLD-208ENST00000507699 ATP1B4Q9UN42 357 aaPredicted RBP9.26□□□□□ -0.93
PALLD-208ENST00000507699 MROH2BQ7Z745 1585 aa9.24□□□□□ -0.93
PALLD-208ENST00000507699 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
PALLD-208ENST00000507699 EIF4G1Q04637 1599 aaKnown RBP9.21□□□□□ -0.93
PALLD-208ENST00000507699 ATAD2BQ9ULI0 1458 aa9.2□□□□□ -0.94
PALLD-208ENST00000507699 BICRAQ9NZM4 1560 aa9.2□□□□□ -0.94
PALLD-208ENST00000507699 APLP2Q06481 763 aa9.19□□□□□ -0.94
PALLD-208ENST00000507699 CC2D2AQ9P2K1 1620 aa9.14□□□□□ -0.95
PALLD-208ENST00000507699 SMARCA4P51532 1647 aa9.14□□□□□ -0.95
PALLD-208ENST00000507699 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.13□□□□□ -0.95
PALLD-208ENST00000507699 HNRNPUL2Q1KMD3 747 aaKnown RBP9.13□□□□□ -0.95
PALLD-208ENST00000507699 PDS5BQ9NTI5 1447 aa9.12□□□□□ -0.95
PALLD-208ENST00000507699 WIZO95785 1651 aa9.1□□□□□ -0.95
PALLD-208ENST00000507699 CADPSQ9ULU8 1353 aa9.09□□□□□ -0.95
PALLD-208ENST00000507699 NCAPD3P42695 1498 aa9.09□□□□□ -0.95
PALLD-208ENST00000507699 UNC13AQ9UPW8 1703 aa9.08□□□□□ -0.96
PALLD-208ENST00000507699 CHMP7Q8WUX9 453 aaPredicted RBP9.08□□□□□ -0.96
PALLD-208ENST00000507699 CCDC88BA6NC98 1476 aa9.06□□□□□ -0.96
PALLD-208ENST00000507699 TOP2AP11388 1531 aaKnown RBP9.02□□□□□ -0.97
PALLD-208ENST00000507699 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
PALLD-208ENST00000507699 CSRNP3Q8WYN3 585 aa9□□□□□ -0.97
PALLD-208ENST00000507699 P3H3Q8IVL6 736 aa8.99□□□□□ -0.97
PALLD-208ENST00000507699 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
PALLD-208ENST00000507699 NESP48681 1621 aa8.98□□□□□ -0.97
PALLD-208ENST00000507699 CEP164Q9UPV0 1460 aa8.98□□□□□ -0.97
PALLD-208ENST00000507699 MYT1LQ9UL68 1186 aa8.97□□□□□ -0.97
PALLD-208ENST00000507699 FANCD2Q9BXW9 1451 aa8.96□□□□□ -0.97
PALLD-208ENST00000507699 ARID3CA6NKF2 412 aa8.96□□□□□ -0.98
PALLD-208ENST00000507699 TDRD9Q8NDG6 1382 aaKnown RBP8.94□□□□□ -0.98
PALLD-208ENST00000507699 NPM1P06748 294 aaKnown RBP eCLIP8.94□□□□□ -0.98
PALLD-208ENST00000507699 HMGXB3Q12766 1538 aa8.92□□□□□ -0.98
PALLD-208ENST00000507699 SOGA1O94964 1423 aa8.92□□□□□ -0.98
PALLD-208ENST00000507699 PPARGC1BQ86YN6 1023 aaKnown RBP8.91□□□□□ -0.98
PALLD-208ENST00000507699 CUX2O14529 1486 aa8.88□□□□□ -0.99
PALLD-208ENST00000507699 KIF27Q86VH2 1401 aa8.87□□□□□ -0.99
PALLD-208ENST00000507699 ABCC8Q09428 1581 aa8.85□□□□□ -0.99
PALLD-208ENST00000507699 CFTRP13569 1480 aa8.84□□□□□ -0.99
PALLD-208ENST00000507699 OSCARQ8IYS5 282 aa8.83□□□□□ -1
PALLD-208ENST00000507699 TRHP20396 242 aaPredicted RBP8.81□□□□□ -1
PALLD-208ENST00000507699 ITGAEP38570 1179 aa8.81□□□□□ -1
PALLD-208ENST00000507699 MRC2Q9UBG0 1479 aa8.81□□□□□ -1
PALLD-208ENST00000507699 CARMIL1Q5VZK9 1371 aa8.79□□□□□ -1
PALLD-208ENST00000507699 RAD54L2Q9Y4B4 1467 aa8.78□□□□□ -1
PALLD-208ENST00000507699 LAMC3Q9Y6N6 1575 aa8.78□□□□□ -1
PALLD-208ENST00000507699 CDK11AQ9UQ88 783 aaPredicted RBP8.77□□□□□ -1.01
PALLD-208ENST00000507699 CYB5RLQ6IPT4 315 aa8.77□□□□□ -1.01
PALLD-208ENST00000507699 AQRO60306 1485 aaKnown RBP eCLIP8.77□□□□□ -1.01
PALLD-208ENST00000507699 FGD5Q6ZNL6 1462 aa8.76□□□□□ -1.01
PALLD-208ENST00000507699 PEG3Q9GZU2 1588 aa8.76□□□□□ -1.01
PALLD-208ENST00000507699 KCNH8Q96L42 1107 aa8.76□□□□□ -1.01
PALLD-208ENST00000507699 ZNF777Q9ULD5 760 aaPredicted RBP8.74□□□□□ -1.01
PALLD-208ENST00000507699 EEA1Q15075 1411 aa8.73□□□□□ -1.01
PALLD-208ENST00000507699 TOPBP1Q92547 1522 aa8.72□□□□□ -1.01
PALLD-208ENST00000507699 JPH4Q96JJ6 628 aa8.72□□□□□ -1.01
PALLD-208ENST00000507699 FAM50AQ14320 339 aaKnown RBP8.71□□□□□ -1.01
PALLD-208ENST00000507699 SENP3Q9H4L4 574 aaPredicted RBP8.71□□□□□ -1.01
PALLD-208ENST00000507699 GAPVD1Q14C86 1478 aa8.71□□□□□ -1.02
PALLD-208ENST00000507699 IFT140Q96RY7 1462 aa8.69□□□□□ -1.02
PALLD-208ENST00000507699 PLEKHD1A6NEE1 506 aa8.68□□□□□ -1.02
PALLD-208ENST00000507699 POLA1P09884 1462 aaPredicted RBP8.67□□□□□ -1.02
PALLD-208ENST00000507699 PLPPR3Q6T4P5 718 aa8.66□□□□□ -1.02
PALLD-208ENST00000507699 CARMIL2Q6F5E8 1435 aa8.66□□□□□ -1.02
PALLD-208ENST00000507699 PCGF6Q9BYE7 350 aa8.66□□□□□ -1.02
PALLD-208ENST00000507699 GOLGA3Q08378 1498 aa8.66□□□□□ -1.02
PALLD-208ENST00000507699 URB2Q14146 1524 aaKnown RBP8.65□□□□□ -1.03
PALLD-208ENST00000507699 GRIN2BQ13224 1484 aa8.65□□□□□ -1.03
PALLD-208ENST00000507699 CLIP1P30622 1438 aa8.64□□□□□ -1.03
PALLD-208ENST00000507699 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
PALLD-208ENST00000507699 CUX1P39880 1505 aa8.63□□□□□ -1.03
PALLD-208ENST00000507699 IGF1RP08069 1367 aa8.63□□□□□ -1.03
PALLD-208ENST00000507699 PHF23Q9BUL5 403 aaPredicted RBP8.62□□□□□ -1.03
PALLD-208ENST00000507699 RUSC2Q8N2Y8 1516 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms