RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 NISCHQ9Y2I1 1504 aa44.19■■■■■ 4.67
SSBP2-208ENST00000507655 CCDC180Q9P1Z9 1646 aa39.44■■■■□ 3.9
SSBP2-208ENST00000507655 ABCC9O60706 1549 aa38.53■■■■□ 3.76
SSBP2-208ENST00000507655 RB1CC1Q8TDY2 1594 aa37.1■■■■□ 3.53
SSBP2-208ENST00000507655 NACADO15069 1562 aa37.04■■■■□ 3.52
SSBP2-208ENST00000507655 ZCCHC6Q5VYS8 1495 aaKnown RBP36.81■■■■□ 3.48
SSBP2-208ENST00000507655 MYO15BQ96JP2 1530 aa36.8■■■■□ 3.48
SSBP2-208ENST00000507655 DCAF8L2P0C7V8 631 aa36.79■■■■□ 3.48
SSBP2-208ENST00000507655 DCAF1Q9Y4B6 1507 aa36.6■■■■□ 3.45
SSBP2-208ENST00000507655 UNC13AQ9UPW8 1703 aa36.43■■■■□ 3.42
SSBP2-208ENST00000507655 BICRAQ9NZM4 1560 aa36.02■■■■□ 3.36
SSBP2-208ENST00000507655 PABPN1Q86U42 306 aaKnown RBP eCLIP35.93■■■■□ 3.34
SSBP2-208ENST00000507655 SCRIBQ14160 1630 aa35.88■■■■□ 3.33
SSBP2-208ENST00000507655 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
SSBP2-208ENST00000507655 DNAJC5BQ9UF47 199 aa35.45■■■■□ 3.27
SSBP2-208ENST00000507655 EIF4G1Q04637 1599 aaKnown RBP35.04■■■■□ 3.2
SSBP2-208ENST00000507655 CC2D2AQ9P2K1 1620 aa34.94■■■■□ 3.18
SSBP2-208ENST00000507655 CECR2Q9BXF3 1484 aa34.65■■■■□ 3.14
SSBP2-208ENST00000507655 SMARCA4P51532 1647 aa34.36■■■■□ 3.09
SSBP2-208ENST00000507655 BAZ1AQ9NRL2 1556 aaPredicted RBP34.27■■■■□ 3.08
SSBP2-208ENST00000507655 NCAPD3P42695 1498 aa34.14■■■■□ 3.06
SSBP2-208ENST00000507655 ATAD2BQ9ULI0 1458 aa34.14■■■■□ 3.06
SSBP2-208ENST00000507655 SMARCA2P51531 1590 aa34.12■■■■□ 3.05
SSBP2-208ENST00000507655 MROH2BQ7Z745 1585 aa34.05■■■■□ 3.04
SSBP2-208ENST00000507655 PEG3Q9GZU2 1588 aa34.04■■■■□ 3.04
SSBP2-208ENST00000507655 HMGXB3Q12766 1538 aa34.01■■■■□ 3.04
SSBP2-208ENST00000507655 BAZ1BQ9UIG0 1483 aaKnown RBP33.83■■■■□ 3.01
SSBP2-208ENST00000507655 WIZO95785 1651 aa33.73■■■□□ 2.99
SSBP2-208ENST00000507655 RSF1Q96T23 1441 aaPredicted RBP33.59■■■□□ 2.97
SSBP2-208ENST00000507655 NESP48681 1621 aa33.34■■■□□ 2.93
SSBP2-208ENST00000507655 TOP2AP11388 1531 aaKnown RBP33.33■■■□□ 2.93
SSBP2-208ENST00000507655 LAMC3Q9Y6N6 1575 aa33.3■■■□□ 2.92
SSBP2-208ENST00000507655 ERCC6Q03468 1493 aa33.2■■■□□ 2.91
SSBP2-208ENST00000507655 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
SSBP2-208ENST00000507655 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.88
SSBP2-208ENST00000507655 PDS5BQ9NTI5 1447 aa33■■■□□ 2.87
SSBP2-208ENST00000507655 CUX2O14529 1486 aa32.96■■■□□ 2.87
SSBP2-208ENST00000507655 THOC2Q8NI27 1593 aaKnown RBP32.95■■■□□ 2.86
SSBP2-208ENST00000507655 CFTRP13569 1480 aa32.92■■■□□ 2.86
SSBP2-208ENST00000507655 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
SSBP2-208ENST00000507655 PRDM2Q13029 1718 aa32.87■■■□□ 2.85
SSBP2-208ENST00000507655 FANCD2Q9BXW9 1451 aa32.74■■■□□ 2.83
SSBP2-208ENST00000507655 CEP164Q9UPV0 1460 aa32.72■■■□□ 2.83
SSBP2-208ENST00000507655 MRC2Q9UBG0 1479 aa32.69■■■□□ 2.82
SSBP2-208ENST00000507655 WDR62O43379 1518 aa32.64■■■□□ 2.82
SSBP2-208ENST00000507655 SUPT5HO00267 1087 aaKnown RBP32.55■■■□□ 2.8
SSBP2-208ENST00000507655 URB2Q14146 1524 aaKnown RBP32.44■■■□□ 2.78
SSBP2-208ENST00000507655 TOPBP1Q92547 1522 aa32.23■■■□□ 2.75
SSBP2-208ENST00000507655 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
SSBP2-208ENST00000507655 DNMBPQ6XZF7 1577 aa32.21■■■□□ 2.75
SSBP2-208ENST00000507655 IFT140Q96RY7 1462 aa32.03■■■□□ 2.72
SSBP2-208ENST00000507655 DNAJC5Q9H3Z4 198 aa32■■■□□ 2.71
SSBP2-208ENST00000507655 CUX1P39880 1505 aa31.95■■■□□ 2.71
SSBP2-208ENST00000507655 TARBP1Q13395 1621 aaKnown RBP31.95■■■□□ 2.71
SSBP2-208ENST00000507655 POLA1P09884 1462 aaPredicted RBP31.94■■■□□ 2.7
SSBP2-208ENST00000507655 ZNF608Q9ULD9 1512 aaPredicted RBP31.89■■■□□ 2.7
SSBP2-208ENST00000507655 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
SSBP2-208ENST00000507655 EIF4G3O43432 1585 aaKnown RBP31.83■■■□□ 2.69
SSBP2-208ENST00000507655 RAD54L2Q9Y4B4 1467 aa31.78■■■□□ 2.68
SSBP2-208ENST00000507655 SOGA1O94964 1423 aa31.76■■■□□ 2.68
SSBP2-208ENST00000507655 BIVM-ERCC5R4GMW8 1640 aa31.73■■■□□ 2.67
SSBP2-208ENST00000507655 WDR97A6NE52 1622 aa31.71■■■□□ 2.67
SSBP2-208ENST00000507655 TOP2BQ02880 1626 aa31.69■■■□□ 2.66
SSBP2-208ENST00000507655 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.66
SSBP2-208ENST00000507655 WRNQ14191 1432 aaPredicted RBP eCLIP31.66■■■□□ 2.66
SSBP2-208ENST00000507655 SYNJ1O43426 1573 aa31.66■■■□□ 2.66
SSBP2-208ENST00000507655 TDRD9Q8NDG6 1382 aaKnown RBP31.57■■■□□ 2.64
SSBP2-208ENST00000507655 ABCA10Q8WWZ4 1543 aa31.54■■■□□ 2.64
SSBP2-208ENST00000507655 CHD1O14646 1710 aa31.52■■■□□ 2.64
SSBP2-208ENST00000507655 PBRM1Q86U86 1689 aa31.5■■■□□ 2.63
SSBP2-208ENST00000507655 OSCARQ8IYS5 282 aa31.49■■■□□ 2.63
SSBP2-208ENST00000507655 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
SSBP2-208ENST00000507655 GRIN2BQ13224 1484 aa31.43■■■□□ 2.62
SSBP2-208ENST00000507655 GAPVD1Q14C86 1478 aa31.42■■■□□ 2.62
SSBP2-208ENST00000507655 SNAPC4Q5SXM2 1469 aa31.4■■■□□ 2.62
SSBP2-208ENST00000507655 MAGI1Q96QZ7 1491 aaPredicted RBP31.38■■■□□ 2.61
SSBP2-208ENST00000507655 SYNJ2O15056 1496 aa31.25■■■□□ 2.59
SSBP2-208ENST00000507655 FBLN2P98095 1184 aa31.24■■■□□ 2.59
SSBP2-208ENST00000507655 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
SSBP2-208ENST00000507655 ADAMTS12P58397 1594 aa31.17■■■□□ 2.58
SSBP2-208ENST00000507655 CHMP7Q8WUX9 453 aaPredicted RBP31.16■■■□□ 2.58
SSBP2-208ENST00000507655 RIMBP3CA6NJZ7 1639 aa31.12■■■□□ 2.57
SSBP2-208ENST00000507655 RIMBP3BA6NNM3 1639 aa31.12■■■□□ 2.57
SSBP2-208ENST00000507655 RIMBP3Q9UFD9 1639 aa31.12■■■□□ 2.57
SSBP2-208ENST00000507655 CLASP1Q7Z460 1538 aa31.1■■■□□ 2.57
SSBP2-208ENST00000507655 ARHGEF11O15085 1522 aa31.05■■■□□ 2.56
SSBP2-208ENST00000507655 GRIN2AQ12879 1464 aa31.05■■■□□ 2.56
SSBP2-208ENST00000507655 FHAD1B1AJZ9 1412 aa31.05■■■□□ 2.56
SSBP2-208ENST00000507655 KIF27Q86VH2 1401 aa31■■■□□ 2.55
SSBP2-208ENST00000507655 CEP170Q5SW79 1584 aa30.93■■■□□ 2.54
SSBP2-208ENST00000507655 CUL7Q14999 1698 aa30.92■■■□□ 2.54
SSBP2-208ENST00000507655 NUP160Q12769 1436 aa30.91■■■□□ 2.54
SSBP2-208ENST00000507655 IGF1RP08069 1367 aa30.89■■■□□ 2.54
SSBP2-208ENST00000507655 TRIM41Q8WV44 630 aa30.85■■■□□ 2.53
SSBP2-208ENST00000507655 ARAP1Q96P48 1450 aa30.79■■■□□ 2.52
SSBP2-208ENST00000507655 SHROOM2Q13796 1616 aa30.77■■■□□ 2.52
SSBP2-208ENST00000507655 RUSC2Q8N2Y8 1516 aa30.73■■■□□ 2.51
SSBP2-208ENST00000507655 CARMIL1Q5VZK9 1371 aa30.7■■■□□ 2.51
SSBP2-208ENST00000507655 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
SSBP2-208ENST00000507655 ERCC6L2Q5T890 1561 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms