RNA–Protein interactions for RNA: ENST00000507607.1

LMF2-205, Transcript of lipase maturation factor 2, humanhuman

TSL 2

Gene LMF2, Length 605 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF2-205ENST00000507607 NISCHQ9Y2I1 1504 aa46.95■■■■■ 5.11
LMF2-205ENST00000507607 ABCC9O60706 1549 aa41.98■■■■■ 4.31
LMF2-205ENST00000507607 CCDC180Q9P1Z9 1646 aa41.98■■■■■ 4.31
LMF2-205ENST00000507607 RB1CC1Q8TDY2 1594 aa39.95■■■■□ 3.99
LMF2-205ENST00000507607 DCAF8L2P0C7V8 631 aa39.77■■■■□ 3.96
LMF2-205ENST00000507607 NACADO15069 1562 aa39.72■■■■□ 3.95
LMF2-205ENST00000507607 DNAJC5BQ9UF47 199 aa39.3■■■■□ 3.88
LMF2-205ENST00000507607 PABPN1Q86U42 306 aaKnown RBP eCLIP39.18■■■■□ 3.86
LMF2-205ENST00000507607 MYO15BQ96JP2 1530 aa39.18■■■■□ 3.86
LMF2-205ENST00000507607 UNC13AQ9UPW8 1703 aa38.98■■■■□ 3.83
LMF2-205ENST00000507607 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
LMF2-205ENST00000507607 BICRAQ9NZM4 1560 aa38.77■■■■□ 3.8
LMF2-205ENST00000507607 DCAF1Q9Y4B6 1507 aa38.74■■■■□ 3.79
LMF2-205ENST00000507607 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
LMF2-205ENST00000507607 SHROOM4Q9ULL8 1493 aa38.22■■■■□ 3.71
LMF2-205ENST00000507607 CC2D2AQ9P2K1 1620 aa37.87■■■■□ 3.65
LMF2-205ENST00000507607 EIF4G1Q04637 1599 aaKnown RBP37.82■■■■□ 3.65
LMF2-205ENST00000507607 CECR2Q9BXF3 1484 aa37.78■■■■□ 3.64
LMF2-205ENST00000507607 NCAPD3P42695 1498 aa36.69■■■■□ 3.46
LMF2-205ENST00000507607 ATAD2BQ9ULI0 1458 aa36.61■■■■□ 3.45
LMF2-205ENST00000507607 SMARCA4P51532 1647 aa36.56■■■■□ 3.44
LMF2-205ENST00000507607 SMARCA2P51531 1590 aa36.49■■■■□ 3.43
LMF2-205ENST00000507607 BAZ1AQ9NRL2 1556 aaPredicted RBP36.42■■■■□ 3.42
LMF2-205ENST00000507607 HMGXB3Q12766 1538 aa36.39■■■■□ 3.42
LMF2-205ENST00000507607 BAZ1BQ9UIG0 1483 aaKnown RBP36.27■■■■□ 3.4
LMF2-205ENST00000507607 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
LMF2-205ENST00000507607 MROH2BQ7Z745 1585 aa36.19■■■■□ 3.38
LMF2-205ENST00000507607 PEG3Q9GZU2 1588 aa36.18■■■■□ 3.38
LMF2-205ENST00000507607 NESP48681 1621 aa36.09■■■■□ 3.37
LMF2-205ENST00000507607 CUX2O14529 1486 aa36.07■■■■□ 3.37
LMF2-205ENST00000507607 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
LMF2-205ENST00000507607 LAMC3Q9Y6N6 1575 aa35.81■■■■□ 3.32
LMF2-205ENST00000507607 WIZO95785 1651 aa35.75■■■■□ 3.31
LMF2-205ENST00000507607 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
LMF2-205ENST00000507607 CADPSQ9ULU8 1353 aa35.63■■■■□ 3.29
LMF2-205ENST00000507607 THOC2Q8NI27 1593 aaKnown RBP35.61■■■■□ 3.29
LMF2-205ENST00000507607 KIF21AQ7Z4S6 1674 aa35.56■■■■□ 3.28
LMF2-205ENST00000507607 RSF1Q96T23 1441 aaPredicted RBP35.52■■■■□ 3.28
LMF2-205ENST00000507607 MRC2Q9UBG0 1479 aa35.31■■■■□ 3.24
LMF2-205ENST00000507607 TOP2AP11388 1531 aaKnown RBP35.29■■■■□ 3.24
LMF2-205ENST00000507607 CFTRP13569 1480 aa35.21■■■■□ 3.23
LMF2-205ENST00000507607 CEP164Q9UPV0 1460 aa35.21■■■■□ 3.23
LMF2-205ENST00000507607 WDR62O43379 1518 aa35.19■■■■□ 3.22
LMF2-205ENST00000507607 FANCD2Q9BXW9 1451 aa35.19■■■■□ 3.22
LMF2-205ENST00000507607 CCDC88BA6NC98 1476 aa34.96■■■■□ 3.19
LMF2-205ENST00000507607 URB2Q14146 1524 aaKnown RBP34.88■■■■□ 3.17
LMF2-205ENST00000507607 PRDM2Q13029 1718 aa34.75■■■■□ 3.15
LMF2-205ENST00000507607 OSCARQ8IYS5 282 aa34.55■■■■□ 3.12
LMF2-205ENST00000507607 TOPBP1Q92547 1522 aa34.53■■■■□ 3.12
LMF2-205ENST00000507607 TRIM41Q8WV44 630 aa34.52■■■■□ 3.12
LMF2-205ENST00000507607 IFT140Q96RY7 1462 aa34.51■■■■□ 3.11
LMF2-205ENST00000507607 ABCC8Q09428 1581 aa34.47■■■■□ 3.11
LMF2-205ENST00000507607 ZNF608Q9ULD9 1512 aaPredicted RBP34.45■■■■□ 3.1
LMF2-205ENST00000507607 DNMBPQ6XZF7 1577 aa34.4■■■■□ 3.1
LMF2-205ENST00000507607 EIF4G3O43432 1585 aaKnown RBP34.2■■■■□ 3.07
LMF2-205ENST00000507607 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.062e-8■■■■■ 30.7
LMF2-205ENST00000507607 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
LMF2-205ENST00000507607 POLA1P09884 1462 aaPredicted RBP34.19■■■■□ 3.06
LMF2-205ENST00000507607 TARBP1Q13395 1621 aaKnown RBP34.18■■■■□ 3.06
LMF2-205ENST00000507607 RAD54L2Q9Y4B4 1467 aa34.11■■■■□ 3.05
LMF2-205ENST00000507607 SOGA1O94964 1423 aa34.09■■■■□ 3.05
LMF2-205ENST00000507607 TDRD9Q8NDG6 1382 aaKnown RBP34.02■■■■□ 3.04
LMF2-205ENST00000507607 FBLN2P98095 1184 aa34.02■■■■□ 3.04
LMF2-205ENST00000507607 FGD5Q6ZNL6 1462 aa34.01■■■■□ 3.03
LMF2-205ENST00000507607 CUX1P39880 1505 aa33.99■■■■□ 3.03
LMF2-205ENST00000507607 RIMBP3CA6NJZ7 1639 aa33.97■■■■□ 3.03
LMF2-205ENST00000507607 RIMBP3BA6NNM3 1639 aa33.97■■■■□ 3.03
LMF2-205ENST00000507607 RIMBP3Q9UFD9 1639 aa33.97■■■■□ 3.03
LMF2-205ENST00000507607 CHD1O14646 1710 aa33.91■■■■□ 3.02
LMF2-205ENST00000507607 ARHGEF11O15085 1522 aa33.9■■■■□ 3.02
LMF2-205ENST00000507607 SNAPC4Q5SXM2 1469 aa33.81■■■■□ 3
LMF2-205ENST00000507607 WDR97A6NE52 1622 aa33.8■■■■□ 3
LMF2-205ENST00000507607 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
LMF2-205ENST00000507607 CHMP7Q8WUX9 453 aaPredicted RBP33.76■■■□□ 2.99
LMF2-205ENST00000507607 GRIN2BQ13224 1484 aa33.74■■■□□ 2.99
LMF2-205ENST00000507607 MAGI1Q96QZ7 1491 aaPredicted RBP33.7■■■□□ 2.99
LMF2-205ENST00000507607 GAPVD1Q14C86 1478 aa33.65■■■□□ 2.98
LMF2-205ENST00000507607 ABCA10Q8WWZ4 1543 aa33.62■■■□□ 2.97
LMF2-205ENST00000507607 SYNJ2O15056 1496 aa33.6■■■□□ 2.97
LMF2-205ENST00000507607 ARAP1Q96P48 1450 aa33.58■■■□□ 2.97
LMF2-205ENST00000507607 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
LMF2-205ENST00000507607 WRNQ14191 1432 aaPredicted RBP eCLIP33.54■■■□□ 2.96
LMF2-205ENST00000507607 PBRM1Q86U86 1689 aa33.54■■■□□ 2.96
LMF2-205ENST00000507607 CLASP1Q7Z460 1538 aa33.53■■■□□ 2.96
LMF2-205ENST00000507607 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
LMF2-205ENST00000507607 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
LMF2-205ENST00000507607 BIVM-ERCC5R4GMW8 1640 aa33.42■■■□□ 2.94
LMF2-205ENST00000507607 TRHP20396 242 aaPredicted RBP33.36■■■□□ 2.93
LMF2-205ENST00000507607 GRIN2AQ12879 1464 aa33.29■■■□□ 2.92
LMF2-205ENST00000507607 ADAMTS12P58397 1594 aa33.25■■■□□ 2.91
LMF2-205ENST00000507607 FHAD1B1AJZ9 1412 aa33.23■■■□□ 2.91
LMF2-205ENST00000507607 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
LMF2-205ENST00000507607 NUP160Q12769 1436 aa33.17■■■□□ 2.9
LMF2-205ENST00000507607 CEP170Q5SW79 1584 aa33.14■■■□□ 2.9
LMF2-205ENST00000507607 ERCC6L2Q5T890 1561 aa33.07■■■□□ 2.88
LMF2-205ENST00000507607 SHROOM2Q13796 1616 aa32.95■■■□□ 2.86
LMF2-205ENST00000507607 JPH4Q96JJ6 628 aa32.93■■■□□ 2.86
LMF2-205ENST00000507607 PRG4Q92954 1404 aaPredicted RBP32.89■■■□□ 2.86
LMF2-205ENST00000507607 KIF27Q86VH2 1401 aa32.87■■■□□ 2.85
LMF2-205ENST00000507607 IGF1RP08069 1367 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms