RNA–Protein interactions for RNA: ENST00000507416.1

SMIM15-202, Transcript of small integral membrane protein 15, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM15, Length 584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM15-202ENST00000507416 NISCHQ9Y2I1 1504 aa32.03■■■□□ 2.72
SMIM15-202ENST00000507416 ABCC9O60706 1549 aa28.8■■■□□ 2.2
SMIM15-202ENST00000507416 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
SMIM15-202ENST00000507416 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
SMIM15-202ENST00000507416 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
SMIM15-202ENST00000507416 NACADO15069 1562 aa27.17■■□□□ 1.94
SMIM15-202ENST00000507416 DNAJC5BQ9UF47 199 aa26.96■■□□□ 1.91
SMIM15-202ENST00000507416 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.89
SMIM15-202ENST00000507416 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
SMIM15-202ENST00000507416 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
SMIM15-202ENST00000507416 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
SMIM15-202ENST00000507416 BICRAQ9NZM4 1560 aa26.51■■□□□ 1.83
SMIM15-202ENST00000507416 DCAF1Q9Y4B6 1507 aa26.4■■□□□ 1.82
SMIM15-202ENST00000507416 SCRIBQ14160 1630 aa26.25■■□□□ 1.79
SMIM15-202ENST00000507416 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
SMIM15-202ENST00000507416 CC2D2AQ9P2K1 1620 aa25.98■■□□□ 1.75
SMIM15-202ENST00000507416 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
SMIM15-202ENST00000507416 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
SMIM15-202ENST00000507416 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
SMIM15-202ENST00000507416 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
SMIM15-202ENST00000507416 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
SMIM15-202ENST00000507416 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
SMIM15-202ENST00000507416 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
SMIM15-202ENST00000507416 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
SMIM15-202ENST00000507416 HMGXB3Q12766 1538 aa24.87■■□□□ 1.57
SMIM15-202ENST00000507416 BAZ1BQ9UIG0 1483 aaKnown RBP24.82■■□□□ 1.56
SMIM15-202ENST00000507416 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
SMIM15-202ENST00000507416 CUX2O14529 1486 aa24.77■■□□□ 1.56
SMIM15-202ENST00000507416 NESP48681 1621 aa24.72■■□□□ 1.55
SMIM15-202ENST00000507416 MROH2BQ7Z745 1585 aa24.69■■□□□ 1.54
SMIM15-202ENST00000507416 PEG3Q9GZU2 1588 aa24.69■■□□□ 1.54
SMIM15-202ENST00000507416 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
SMIM15-202ENST00000507416 PDS5BQ9NTI5 1447 aa24.43■■□□□ 1.5
SMIM15-202ENST00000507416 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
SMIM15-202ENST00000507416 WIZO95785 1651 aa24.41■■□□□ 1.5
SMIM15-202ENST00000507416 KIF21AQ7Z4S6 1674 aa24.39■■□□□ 1.49
SMIM15-202ENST00000507416 CADPSQ9ULU8 1353 aa24.35■■□□□ 1.49
SMIM15-202ENST00000507416 MRC2Q9UBG0 1479 aa24.19■■□□□ 1.46
SMIM15-202ENST00000507416 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
SMIM15-202ENST00000507416 CEP164Q9UPV0 1460 aa24.12■■□□□ 1.45
SMIM15-202ENST00000507416 WDR62O43379 1518 aa24.1■■□□□ 1.45
SMIM15-202ENST00000507416 TOP2AP11388 1531 aaKnown RBP24.1■■□□□ 1.45
SMIM15-202ENST00000507416 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
SMIM15-202ENST00000507416 CFTRP13569 1480 aa24.04■■□□□ 1.44
SMIM15-202ENST00000507416 URB2Q14146 1524 aaKnown RBP23.85■■□□□ 1.41
SMIM15-202ENST00000507416 CCDC88BA6NC98 1476 aa23.83■■□□□ 1.41
SMIM15-202ENST00000507416 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
SMIM15-202ENST00000507416 PRDM2Q13029 1718 aa23.79■■□□□ 1.4
SMIM15-202ENST00000507416 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
SMIM15-202ENST00000507416 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
SMIM15-202ENST00000507416 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
SMIM15-202ENST00000507416 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.36
SMIM15-202ENST00000507416 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
SMIM15-202ENST00000507416 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
SMIM15-202ENST00000507416 EIF4G3O43432 1585 aaKnown RBP23.44■■□□□ 1.34
SMIM15-202ENST00000507416 AQRO60306 1485 aaKnown RBP eCLIP23.39■■□□□ 1.345e-8■■■□□ 18.8
SMIM15-202ENST00000507416 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
SMIM15-202ENST00000507416 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
SMIM15-202ENST00000507416 RIMBP3CA6NJZ7 1639 aa23.35■■□□□ 1.33
SMIM15-202ENST00000507416 RIMBP3BA6NNM3 1639 aa23.35■■□□□ 1.33
SMIM15-202ENST00000507416 RIMBP3Q9UFD9 1639 aa23.35■■□□□ 1.33
SMIM15-202ENST00000507416 FBLN2P98095 1184 aa23.35■■□□□ 1.33
SMIM15-202ENST00000507416 RAD54L2Q9Y4B4 1467 aa23.31■■□□□ 1.32
SMIM15-202ENST00000507416 SOGA1O94964 1423 aa23.31■■□□□ 1.32
SMIM15-202ENST00000507416 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
SMIM15-202ENST00000507416 CHD1O14646 1710 aa23.28■■□□□ 1.32
SMIM15-202ENST00000507416 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
SMIM15-202ENST00000507416 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
SMIM15-202ENST00000507416 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
SMIM15-202ENST00000507416 CUX1P39880 1505 aa23.19■■□□□ 1.3
SMIM15-202ENST00000507416 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
SMIM15-202ENST00000507416 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
SMIM15-202ENST00000507416 CHMP7Q8WUX9 453 aaPredicted RBP23.14■■□□□ 1.29
SMIM15-202ENST00000507416 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
SMIM15-202ENST00000507416 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
SMIM15-202ENST00000507416 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
SMIM15-202ENST00000507416 ARAP1Q96P48 1450 aa23.04■■□□□ 1.28
SMIM15-202ENST00000507416 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
SMIM15-202ENST00000507416 SYNJ2O15056 1496 aa23■■□□□ 1.27
SMIM15-202ENST00000507416 GAPVD1Q14C86 1478 aa23■■□□□ 1.27
SMIM15-202ENST00000507416 PBRM1Q86U86 1689 aa22.98■■□□□ 1.27
SMIM15-202ENST00000507416 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
SMIM15-202ENST00000507416 CLASP1Q7Z460 1538 aa22.97■■□□□ 1.27
SMIM15-202ENST00000507416 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
SMIM15-202ENST00000507416 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
SMIM15-202ENST00000507416 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
SMIM15-202ENST00000507416 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
SMIM15-202ENST00000507416 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
SMIM15-202ENST00000507416 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
SMIM15-202ENST00000507416 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
SMIM15-202ENST00000507416 FHAD1B1AJZ9 1412 aa22.71■■□□□ 1.23
SMIM15-202ENST00000507416 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
SMIM15-202ENST00000507416 ERICH3Q5RHP9 1530 aa22.67■■□□□ 1.22
SMIM15-202ENST00000507416 NUP160Q12769 1436 aa22.66■■□□□ 1.22
SMIM15-202ENST00000507416 ERCC6L2Q5T890 1561 aa22.63■■□□□ 1.21
SMIM15-202ENST00000507416 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
SMIM15-202ENST00000507416 PRG4Q92954 1404 aaPredicted RBP22.51■■□□□ 1.19
SMIM15-202ENST00000507416 JPH4Q96JJ6 628 aa22.5■■□□□ 1.19
SMIM15-202ENST00000507416 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
SMIM15-202ENST00000507416 RUSC2Q8N2Y8 1516 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms