RNA–Protein interactions for RNA: ENST00000507340.5

SEC31A-221, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 4

Gene SEC31A, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-221ENST00000507340 NISCHQ9Y2I1 1504 aa49.39■■■■■ 5.5
SEC31A-221ENST00000507340 ABCC9O60706 1549 aa44.63■■■■■ 4.73
SEC31A-221ENST00000507340 CCDC180Q9P1Z9 1646 aa44.32■■■■■ 4.69
SEC31A-221ENST00000507340 RB1CC1Q8TDY2 1594 aa42.31■■■■■ 4.36
SEC31A-221ENST00000507340 DNAJC5BQ9UF47 199 aa42.12■■■■■ 4.33
SEC31A-221ENST00000507340 NACADO15069 1562 aa41.97■■■■■ 4.31
SEC31A-221ENST00000507340 DCAF8L2P0C7V8 631 aa41.87■■■■■ 4.29
SEC31A-221ENST00000507340 PABPN1Q86U42 306 aaKnown RBP eCLIP41.57■■■■■ 4.25
SEC31A-221ENST00000507340 UNC13AQ9UPW8 1703 aa41.41■■■■■ 4.22
SEC31A-221ENST00000507340 MYO15BQ96JP2 1530 aa41.3■■■■■ 4.2
SEC31A-221ENST00000507340 BICRAQ9NZM4 1560 aa41.15■■■■■ 4.18
SEC31A-221ENST00000507340 ZCCHC6Q5VYS8 1495 aaKnown RBP40.87■■■■■ 4.13
SEC31A-221ENST00000507340 DCAF1Q9Y4B6 1507 aa40.72■■■■■ 4.11
SEC31A-221ENST00000507340 SCRIBQ14160 1630 aa40.46■■■■■ 4.07
SEC31A-221ENST00000507340 SHROOM4Q9ULL8 1493 aa40.45■■■■■ 4.07
SEC31A-221ENST00000507340 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
SEC31A-221ENST00000507340 CECR2Q9BXF3 1484 aa40.19■■■■■ 4.03
SEC31A-221ENST00000507340 EIF4G1Q04637 1599 aaKnown RBP40.12■■■■■ 4.01
SEC31A-221ENST00000507340 NCAPD3P42695 1498 aa38.79■■■■□ 3.8
SEC31A-221ENST00000507340 DNAJC5Q9H3Z4 198 aa38.74■■■■□ 3.79
SEC31A-221ENST00000507340 ATAD2BQ9ULI0 1458 aa38.66■■■■□ 3.78
SEC31A-221ENST00000507340 SMARCA4P51532 1647 aa38.56■■■■□ 3.76
SEC31A-221ENST00000507340 ERCC6Q03468 1493 aa38.5■■■■□ 3.75
SEC31A-221ENST00000507340 SMARCA2P51531 1590 aa38.49■■■■□ 3.75
SEC31A-221ENST00000507340 CUX2O14529 1486 aa38.46■■■■□ 3.75
SEC31A-221ENST00000507340 HMGXB3Q12766 1538 aa38.44■■■■□ 3.74
SEC31A-221ENST00000507340 BAZ1AQ9NRL2 1556 aaPredicted RBP38.31■■■■□ 3.72
SEC31A-221ENST00000507340 NESP48681 1621 aa38.31■■■■□ 3.72
SEC31A-221ENST00000507340 BAZ1BQ9UIG0 1483 aaKnown RBP38.26■■■■□ 3.72
SEC31A-221ENST00000507340 PEG3Q9GZU2 1588 aa38.15■■■■□ 3.7
SEC31A-221ENST00000507340 MROH2BQ7Z745 1585 aa38.09■■■■□ 3.69
SEC31A-221ENST00000507340 LAMC3Q9Y6N6 1575 aa37.9■■■■□ 3.66
SEC31A-221ENST00000507340 THOC2Q8NI27 1593 aaKnown RBP37.89■■■■□ 3.66
SEC31A-221ENST00000507340 KIF21AQ7Z4S6 1674 aa37.76■■■■□ 3.63
SEC31A-221ENST00000507340 PDS5BQ9NTI5 1447 aa37.71■■■■□ 3.63
SEC31A-221ENST00000507340 WIZO95785 1651 aa37.63■■■■□ 3.61
SEC31A-221ENST00000507340 CADPSQ9ULU8 1353 aa37.61■■■■□ 3.61
SEC31A-221ENST00000507340 MRC2Q9UBG0 1479 aa37.41■■■■□ 3.58
SEC31A-221ENST00000507340 WDR62O43379 1518 aa37.31■■■■□ 3.56
SEC31A-221ENST00000507340 RSF1Q96T23 1441 aaPredicted RBP37.22■■■■□ 3.55
SEC31A-221ENST00000507340 CEP164Q9UPV0 1460 aa37.21■■■■□ 3.55
SEC31A-221ENST00000507340 FANCD2Q9BXW9 1451 aa37.19■■■■□ 3.54
SEC31A-221ENST00000507340 CFTRP13569 1480 aa37.13■■■■□ 3.54
SEC31A-221ENST00000507340 TOP2AP11388 1531 aaKnown RBP37.08■■■■□ 3.53
SEC31A-221ENST00000507340 TRIM41Q8WV44 630 aa37■■■■□ 3.51
SEC31A-221ENST00000507340 URB2Q14146 1524 aaKnown RBP36.92■■■■□ 3.5
SEC31A-221ENST00000507340 OSCARQ8IYS5 282 aa36.73■■■■□ 3.47
SEC31A-221ENST00000507340 CCDC88BA6NC98 1476 aa36.72■■■■□ 3.47
SEC31A-221ENST00000507340 PRDM2Q13029 1718 aa36.69■■■■□ 3.46
SEC31A-221ENST00000507340 ZNF608Q9ULD9 1512 aaPredicted RBP36.51■■■■□ 3.44
SEC31A-221ENST00000507340 IFT140Q96RY7 1462 aa36.48■■■■□ 3.43
SEC31A-221ENST00000507340 TOPBP1Q92547 1522 aa36.47■■■■□ 3.43
SEC31A-221ENST00000507340 ABCC8Q09428 1581 aa36.31■■■■□ 3.4
SEC31A-221ENST00000507340 DNMBPQ6XZF7 1577 aa36.28■■■■□ 3.4
SEC31A-221ENST00000507340 RIMBP3CA6NJZ7 1639 aa36.26■■■■□ 3.4
SEC31A-221ENST00000507340 RIMBP3BA6NNM3 1639 aa36.26■■■■□ 3.4
SEC31A-221ENST00000507340 RIMBP3Q9UFD9 1639 aa36.26■■■■□ 3.4
SEC31A-221ENST00000507340 EIF4G3O43432 1585 aaKnown RBP36.24■■■■□ 3.39
SEC31A-221ENST00000507340 AQRO60306 1485 aaKnown RBP eCLIP36.17■■■■□ 3.389e-8■■■□□ 15
SEC31A-221ENST00000507340 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
SEC31A-221ENST00000507340 ARHGEF11O15085 1522 aa36.13■■■■□ 3.37
SEC31A-221ENST00000507340 POLA1P09884 1462 aaPredicted RBP36.08■■■■□ 3.37
SEC31A-221ENST00000507340 CHD1O14646 1710 aa36.02■■■■□ 3.36
SEC31A-221ENST00000507340 RAD54L2Q9Y4B4 1467 aa36■■■■□ 3.35
SEC31A-221ENST00000507340 FBLN2P98095 1184 aa35.97■■■■□ 3.35
SEC31A-221ENST00000507340 SOGA1O94964 1423 aa35.93■■■■□ 3.34
SEC31A-221ENST00000507340 CYB5RLQ6IPT4 315 aa35.93■■■■□ 3.34
SEC31A-221ENST00000507340 TDRD9Q8NDG6 1382 aaKnown RBP35.92■■■■□ 3.34
SEC31A-221ENST00000507340 FGD5Q6ZNL6 1462 aa35.84■■■■□ 3.33
SEC31A-221ENST00000507340 CUX1P39880 1505 aa35.78■■■■□ 3.32
SEC31A-221ENST00000507340 ARAP1Q96P48 1450 aa35.78■■■■□ 3.32
SEC31A-221ENST00000507340 SNAPC4Q5SXM2 1469 aa35.74■■■■□ 3.31
SEC31A-221ENST00000507340 SUPT5HO00267 1087 aaKnown RBP35.69■■■■□ 3.3
SEC31A-221ENST00000507340 WDR97A6NE52 1622 aa35.68■■■■□ 3.3
SEC31A-221ENST00000507340 CHMP7Q8WUX9 453 aaPredicted RBP35.64■■■■□ 3.3
SEC31A-221ENST00000507340 GRIN2BQ13224 1484 aa35.6■■■■□ 3.29
SEC31A-221ENST00000507340 CLASP1Q7Z460 1538 aa35.6■■■■□ 3.29
SEC31A-221ENST00000507340 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
SEC31A-221ENST00000507340 TRHP20396 242 aaPredicted RBP35.58■■■■□ 3.29
SEC31A-221ENST00000507340 SYNJ1O43426 1573 aa35.52■■■■□ 3.28
SEC31A-221ENST00000507340 SYNJ2O15056 1496 aa35.5■■■■□ 3.27
SEC31A-221ENST00000507340 GAPVD1Q14C86 1478 aa35.47■■■■□ 3.27
SEC31A-221ENST00000507340 PBRM1Q86U86 1689 aa35.44■■■■□ 3.26
SEC31A-221ENST00000507340 ABCA10Q8WWZ4 1543 aa35.4■■■■□ 3.26
SEC31A-221ENST00000507340 ABCA5Q8WWZ7 1642 aa35.35■■■■□ 3.25
SEC31A-221ENST00000507340 WRNQ14191 1432 aaPredicted RBP eCLIP35.22■■■■□ 3.23
SEC31A-221ENST00000507340 GRIN2AQ12879 1464 aa35.16■■■■□ 3.22
SEC31A-221ENST00000507340 TOP2BQ02880 1626 aa35.12■■■■□ 3.21
SEC31A-221ENST00000507340 BIVM-ERCC5R4GMW8 1640 aa35.12■■■■□ 3.21
SEC31A-221ENST00000507340 ADAMTS12P58397 1594 aa35.1■■■■□ 3.21
SEC31A-221ENST00000507340 ERCC6L2Q5T890 1561 aa35.1■■■■□ 3.21
SEC31A-221ENST00000507340 CEP170Q5SW79 1584 aa35.05■■■■□ 3.2
SEC31A-221ENST00000507340 NUP160Q12769 1436 aa35.04■■■■□ 3.2
SEC31A-221ENST00000507340 FHAD1B1AJZ9 1412 aa35■■■■□ 3.19
SEC31A-221ENST00000507340 ERICH3Q5RHP9 1530 aa34.92■■■■□ 3.18
SEC31A-221ENST00000507340 SHROOM2Q13796 1616 aa34.9■■■■□ 3.18
SEC31A-221ENST00000507340 PRG4Q92954 1404 aaPredicted RBP34.75■■■■□ 3.15
SEC31A-221ENST00000507340 JPH4Q96JJ6 628 aa34.73■■■■□ 3.15
SEC31A-221ENST00000507340 AEBP2Q6ZN18 517 aaPredicted RBP34.65■■■■□ 3.14
SEC31A-221ENST00000507340 RUSC2Q8N2Y8 1516 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms