RNA–Protein interactions for RNA: ENST00000506680.5

LEF1-212, Transcript of lymphoid enhancer binding factor 1, humanhuman

TSL 1 (best)

Gene LEF1, Length 1,280 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEF1-212ENST00000506680 NISCHQ9Y2I1 1504 aa47.66■■■■■ 5.22
LEF1-212ENST00000506680 CCDC180Q9P1Z9 1646 aa42.38■■■■■ 4.37
LEF1-212ENST00000506680 ABCC9O60706 1549 aa41.54■■■■■ 4.24
LEF1-212ENST00000506680 DCAF8L2P0C7V8 631 aa40.14■■■■■ 4.02
LEF1-212ENST00000506680 RB1CC1Q8TDY2 1594 aa39.97■■■■□ 3.99
LEF1-212ENST00000506680 NACADO15069 1562 aa39.9■■■■□ 3.98
LEF1-212ENST00000506680 ZCCHC6Q5VYS8 1495 aaKnown RBP39.64■■■■□ 3.94
LEF1-212ENST00000506680 MYO15BQ96JP2 1530 aa39.6■■■■□ 3.93
LEF1-212ENST00000506680 DCAF1Q9Y4B6 1507 aa39.41■■■■□ 3.9
LEF1-212ENST00000506680 UNC13AQ9UPW8 1703 aa38.96■■■■□ 3.83
LEF1-212ENST00000506680 PABPN1Q86U42 306 aaKnown RBP eCLIP38.88■■■■□ 3.81
LEF1-212ENST00000506680 SCRIBQ14160 1630 aa38.68■■■■□ 3.78
LEF1-212ENST00000506680 BICRAQ9NZM4 1560 aa38.61■■■■□ 3.77
LEF1-212ENST00000506680 SHROOM4Q9ULL8 1493 aa38.29■■■■□ 3.72
LEF1-212ENST00000506680 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
LEF1-212ENST00000506680 EIF4G1Q04637 1599 aaKnown RBP37.67■■■■□ 3.62
LEF1-212ENST00000506680 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
LEF1-212ENST00000506680 CECR2Q9BXF3 1484 aa37.33■■■■□ 3.57
LEF1-212ENST00000506680 BAZ1AQ9NRL2 1556 aaPredicted RBP36.99■■■■□ 3.51
LEF1-212ENST00000506680 SMARCA4P51532 1647 aa36.98■■■■□ 3.51
LEF1-212ENST00000506680 SMARCA2P51531 1590 aa36.81■■■■□ 3.48
LEF1-212ENST00000506680 NCAPD3P42695 1498 aa36.8■■■■□ 3.48
LEF1-212ENST00000506680 ATAD2BQ9ULI0 1458 aa36.8■■■■□ 3.48
LEF1-212ENST00000506680 MROH2BQ7Z745 1585 aa36.7■■■■□ 3.47
LEF1-212ENST00000506680 HMGXB3Q12766 1538 aa36.58■■■■□ 3.45
LEF1-212ENST00000506680 PEG3Q9GZU2 1588 aa36.57■■■■□ 3.44
LEF1-212ENST00000506680 BAZ1BQ9UIG0 1483 aaKnown RBP36.56■■■■□ 3.44
LEF1-212ENST00000506680 WIZO95785 1651 aa36.34■■■■□ 3.41
LEF1-212ENST00000506680 RSF1Q96T23 1441 aaPredicted RBP36.31■■■■□ 3.4
LEF1-212ENST00000506680 TOP2AP11388 1531 aaKnown RBP35.94■■■■□ 3.34
LEF1-212ENST00000506680 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
LEF1-212ENST00000506680 NESP48681 1621 aa35.88■■■■□ 3.33
LEF1-212ENST00000506680 LAMC3Q9Y6N6 1575 aa35.85■■■■□ 3.33
LEF1-212ENST00000506680 CADPSQ9ULU8 1353 aa35.77■■■■□ 3.32
LEF1-212ENST00000506680 PDS5BQ9NTI5 1447 aa35.69■■■■□ 3.3
LEF1-212ENST00000506680 SUPT5HO00267 1087 aaKnown RBP35.59■■■■□ 3.29
LEF1-212ENST00000506680 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
LEF1-212ENST00000506680 CFTRP13569 1480 aa35.49■■■■□ 3.27
LEF1-212ENST00000506680 KIF21AQ7Z4S6 1674 aa35.46■■■■□ 3.27
LEF1-212ENST00000506680 CUX2O14529 1486 aa35.44■■■■□ 3.26
LEF1-212ENST00000506680 FANCD2Q9BXW9 1451 aa35.34■■■■□ 3.25
LEF1-212ENST00000506680 CEP164Q9UPV0 1460 aa35.32■■■■□ 3.24
LEF1-212ENST00000506680 THOC2Q8NI27 1593 aaKnown RBP35.29■■■■□ 3.24
LEF1-212ENST00000506680 MRC2Q9UBG0 1479 aa35.24■■■■□ 3.23
LEF1-212ENST00000506680 PRDM2Q13029 1718 aa35.24■■■■□ 3.23
LEF1-212ENST00000506680 WDR62O43379 1518 aa35.06■■■■□ 3.2
LEF1-212ENST00000506680 URB2Q14146 1524 aaKnown RBP34.91■■■■□ 3.18
LEF1-212ENST00000506680 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
LEF1-212ENST00000506680 TOPBP1Q92547 1522 aa34.75■■■■□ 3.15
LEF1-212ENST00000506680 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.15
LEF1-212ENST00000506680 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
LEF1-212ENST00000506680 DNAJC5Q9H3Z4 198 aa34.45■■■■□ 3.11
LEF1-212ENST00000506680 CUX1P39880 1505 aa34.44■■■■□ 3.1
LEF1-212ENST00000506680 POLA1P09884 1462 aaPredicted RBP34.43■■■■□ 3.1
LEF1-212ENST00000506680 SOGA1O94964 1423 aa34.4■■■■□ 3.1
LEF1-212ENST00000506680 FGD5Q6ZNL6 1462 aa34.37■■■■□ 3.09
LEF1-212ENST00000506680 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
LEF1-212ENST00000506680 TARBP1Q13395 1621 aaKnown RBP34.31■■■■□ 3.08
LEF1-212ENST00000506680 RAD54L2Q9Y4B4 1467 aa34.31■■■■□ 3.08
LEF1-212ENST00000506680 WRNQ14191 1432 aaPredicted RBP eCLIP34.3■■■■□ 3.081e-6■■■■■ 58.5
LEF1-212ENST00000506680 AQRO60306 1485 aaKnown RBP eCLIP34.21■■■■□ 3.072e-6■■■■□ 20.1
LEF1-212ENST00000506680 EIF4G3O43432 1585 aaKnown RBP34.2■■■■□ 3.07
LEF1-212ENST00000506680 TDRD9Q8NDG6 1382 aaKnown RBP34.18■■■■□ 3.06
LEF1-212ENST00000506680 TOP2BQ02880 1626 aa34.16■■■■□ 3.06
LEF1-212ENST00000506680 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
LEF1-212ENST00000506680 SYNJ1O43426 1573 aa34.14■■■■□ 3.06
LEF1-212ENST00000506680 OSCARQ8IYS5 282 aa34.13■■■■□ 3.05
LEF1-212ENST00000506680 WDR97A6NE52 1622 aa34.11■■■■□ 3.05
LEF1-212ENST00000506680 ABCA10Q8WWZ4 1543 aa34.03■■■■□ 3.04
LEF1-212ENST00000506680 FBLN2P98095 1184 aa34■■■■□ 3.03
LEF1-212ENST00000506680 GRIN2BQ13224 1484 aa33.97■■■■□ 3.03
LEF1-212ENST00000506680 GAPVD1Q14C86 1478 aa33.97■■■■□ 3.03
LEF1-212ENST00000506680 CHMP7Q8WUX9 453 aaPredicted RBP33.88■■■■□ 3.01
LEF1-212ENST00000506680 SNAPC4Q5SXM2 1469 aa33.88■■■■□ 3.01
LEF1-212ENST00000506680 MAGI1Q96QZ7 1491 aaPredicted RBP33.86■■■■□ 3.01
LEF1-212ENST00000506680 PBRM1Q86U86 1689 aa33.84■■■■□ 3.01
LEF1-212ENST00000506680 ABCA5Q8WWZ7 1642 aa33.83■■■■□ 3.01
LEF1-212ENST00000506680 CHD1O14646 1710 aa33.82■■■■□ 3
LEF1-212ENST00000506680 SYNJ2O15056 1496 aa33.72■■■□□ 2.99
LEF1-212ENST00000506680 ERICH3Q5RHP9 1530 aa33.64■■■□□ 2.98
LEF1-212ENST00000506680 TRIM41Q8WV44 630 aa33.64■■■□□ 2.98
LEF1-212ENST00000506680 KIF27Q86VH2 1401 aa33.63■■■□□ 2.97
LEF1-212ENST00000506680 FHAD1B1AJZ9 1412 aa33.58■■■□□ 2.97
LEF1-212ENST00000506680 ADAMTS12P58397 1594 aa33.53■■■□□ 2.96
LEF1-212ENST00000506680 GRIN2AQ12879 1464 aa33.49■■■□□ 2.95
LEF1-212ENST00000506680 IGF1RP08069 1367 aa33.45■■■□□ 2.94
LEF1-212ENST00000506680 RIMBP3CA6NJZ7 1639 aa33.4■■■□□ 2.94
LEF1-212ENST00000506680 RIMBP3BA6NNM3 1639 aa33.4■■■□□ 2.94
LEF1-212ENST00000506680 RIMBP3Q9UFD9 1639 aa33.4■■■□□ 2.94
LEF1-212ENST00000506680 ARHGEF11O15085 1522 aa33.39■■■□□ 2.94
LEF1-212ENST00000506680 CLASP1Q7Z460 1538 aa33.38■■■□□ 2.93
LEF1-212ENST00000506680 CUL7Q14999 1698 aa33.35■■■□□ 2.93
LEF1-212ENST00000506680 CARMIL1Q5VZK9 1371 aa33.31■■■□□ 2.92
LEF1-212ENST00000506680 NUP160Q12769 1436 aa33.3■■■□□ 2.92
LEF1-212ENST00000506680 CEP170Q5SW79 1584 aa33.26■■■□□ 2.92
LEF1-212ENST00000506680 CYB5RLQ6IPT4 315 aa33.25■■■□□ 2.91
LEF1-212ENST00000506680 RUSC2Q8N2Y8 1516 aa33.2■■■□□ 2.91
LEF1-212ENST00000506680 JPH4Q96JJ6 628 aa33.14■■■□□ 2.9
LEF1-212ENST00000506680 CHIC1Q5VXU3 224 aa33.11■■■□□ 2.89
LEF1-212ENST00000506680 ARAP1Q96P48 1450 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms