RNA–Protein interactions for RNA: ENST00000506647.1

PDK2-208, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 2

Gene PDK2, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-208ENST00000506647 NISCHQ9Y2I1 1504 aa46.1■■■■■ 4.97
PDK2-208ENST00000506647 CCDC180Q9P1Z9 1646 aa41.18■■■■■ 4.18
PDK2-208ENST00000506647 ABCC9O60706 1549 aa40.75■■■■■ 4.11
PDK2-208ENST00000506647 RB1CC1Q8TDY2 1594 aa39.02■■■■□ 3.84
PDK2-208ENST00000506647 NACADO15069 1562 aa38.89■■■■□ 3.82
PDK2-208ENST00000506647 MYO15BQ96JP2 1530 aa38.59■■■■□ 3.77
PDK2-208ENST00000506647 DCAF8L2P0C7V8 631 aa38.58■■■■□ 3.77
PDK2-208ENST00000506647 ZCCHC6Q5VYS8 1495 aaKnown RBP38.29■■■■□ 3.72
PDK2-208ENST00000506647 DCAF1Q9Y4B6 1507 aa38.2■■■■□ 3.71
PDK2-208ENST00000506647 UNC13AQ9UPW8 1703 aa38.01■■■■□ 3.68
PDK2-208ENST00000506647 PABPN1Q86U42 306 aaKnown RBP eCLIP37.99■■■■□ 3.67
PDK2-208ENST00000506647 DNAJC5BQ9UF47 199 aa37.97■■■■□ 3.67
PDK2-208ENST00000506647 BICRAQ9NZM4 1560 aa37.88■■■■□ 3.65
PDK2-208ENST00000506647 SHROOM4Q9ULL8 1493 aa37.54■■■■□ 3.6
PDK2-208ENST00000506647 SCRIBQ14160 1630 aa37.43■■■■□ 3.58
PDK2-208ENST00000506647 EIF4G1Q04637 1599 aaKnown RBP36.91■■■■□ 3.5
PDK2-208ENST00000506647 CC2D2AQ9P2K1 1620 aa36.85■■■■□ 3.49
PDK2-208ENST00000506647 CECR2Q9BXF3 1484 aa36.73■■■■□ 3.47
PDK2-208ENST00000506647 NCAPD3P42695 1498 aa35.95■■■■□ 3.35
PDK2-208ENST00000506647 ATAD2BQ9ULI0 1458 aa35.83■■■■□ 3.33
PDK2-208ENST00000506647 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
PDK2-208ENST00000506647 BAZ1AQ9NRL2 1556 aaPredicted RBP35.75■■■■□ 3.31
PDK2-208ENST00000506647 SMARCA2P51531 1590 aa35.74■■■■□ 3.31
PDK2-208ENST00000506647 HMGXB3Q12766 1538 aa35.67■■■■□ 3.3
PDK2-208ENST00000506647 PEG3Q9GZU2 1588 aa35.59■■■■□ 3.29
PDK2-208ENST00000506647 MROH2BQ7Z745 1585 aa35.48■■■■□ 3.27
PDK2-208ENST00000506647 BAZ1BQ9UIG0 1483 aaKnown RBP35.46■■■■□ 3.27
PDK2-208ENST00000506647 ERCC6Q03468 1493 aa35.16■■■■□ 3.22
PDK2-208ENST00000506647 NESP48681 1621 aa35.12■■■■□ 3.21
PDK2-208ENST00000506647 CUX2O14529 1486 aa35.09■■■■□ 3.21
PDK2-208ENST00000506647 LAMC3Q9Y6N6 1575 aa35.01■■■■□ 3.2
PDK2-208ENST00000506647 WIZO95785 1651 aa35■■■■□ 3.19
PDK2-208ENST00000506647 RSF1Q96T23 1441 aaPredicted RBP34.93■■■■□ 3.18
PDK2-208ENST00000506647 CADPSQ9ULU8 1353 aa34.84■■■■□ 3.17
PDK2-208ENST00000506647 PDS5BQ9NTI5 1447 aa34.81■■■■□ 3.16
PDK2-208ENST00000506647 THOC2Q8NI27 1593 aaKnown RBP34.72■■■■□ 3.15
PDK2-208ENST00000506647 TOP2AP11388 1531 aaKnown RBP34.67■■■■□ 3.14
PDK2-208ENST00000506647 DNAJC5Q9H3Z4 198 aa34.66■■■■□ 3.14
PDK2-208ENST00000506647 KIF21AQ7Z4S6 1674 aa34.63■■■■□ 3.13
PDK2-208ENST00000506647 CFTRP13569 1480 aa34.53■■■■□ 3.12
PDK2-208ENST00000506647 MRC2Q9UBG0 1479 aa34.46■■■■□ 3.11
PDK2-208ENST00000506647 FANCD2Q9BXW9 1451 aa34.39■■■■□ 3.1
PDK2-208ENST00000506647 WDR62O43379 1518 aa34.38■■■■□ 3.09
PDK2-208ENST00000506647 CEP164Q9UPV0 1460 aa34.38■■■■□ 3.09
PDK2-208ENST00000506647 CCDC88BA6NC98 1476 aa34.27■■■■□ 3.08
PDK2-208ENST00000506647 URB2Q14146 1524 aaKnown RBP34.08■■■■□ 3.05
PDK2-208ENST00000506647 PRDM2Q13029 1718 aa34.05■■■■□ 3.04
PDK2-208ENST00000506647 ABCC8Q09428 1581 aa33.8■■■■□ 3
PDK2-208ENST00000506647 TOPBP1Q92547 1522 aa33.78■■■■□ 3
PDK2-208ENST00000506647 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
PDK2-208ENST00000506647 DNMBPQ6XZF7 1577 aa33.68■■■□□ 2.98
PDK2-208ENST00000506647 ZNF608Q9ULD9 1512 aaPredicted RBP33.57■■■□□ 2.96
PDK2-208ENST00000506647 OSCARQ8IYS5 282 aa33.52■■■□□ 2.96
PDK2-208ENST00000506647 SUPT5HO00267 1087 aaKnown RBP33.5■■■□□ 2.95
PDK2-208ENST00000506647 POLA1P09884 1462 aaPredicted RBP33.46■■■□□ 2.95
PDK2-208ENST00000506647 TARBP1Q13395 1621 aaKnown RBP33.46■■■□□ 2.95
PDK2-208ENST00000506647 EIF4G3O43432 1585 aaKnown RBP33.38■■■□□ 2.93
PDK2-208ENST00000506647 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.92
PDK2-208ENST00000506647 SOGA1O94964 1423 aa33.31■■■□□ 2.92
PDK2-208ENST00000506647 CUX1P39880 1505 aa33.31■■■□□ 2.92
PDK2-208ENST00000506647 RAD54L2Q9Y4B4 1467 aa33.28■■■□□ 2.92
PDK2-208ENST00000506647 FGD5Q6ZNL6 1462 aa33.27■■■□□ 2.92
PDK2-208ENST00000506647 WDR97A6NE52 1622 aa33.2■■■□□ 2.91
PDK2-208ENST00000506647 TDRD9Q8NDG6 1382 aaKnown RBP33.18■■■□□ 2.9
PDK2-208ENST00000506647 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
PDK2-208ENST00000506647 GRIN2BQ13224 1484 aa33■■■□□ 2.87
PDK2-208ENST00000506647 CHD1O14646 1710 aa32.99■■■□□ 2.87
PDK2-208ENST00000506647 ABCA10Q8WWZ4 1543 aa32.98■■■□□ 2.87
PDK2-208ENST00000506647 SNAPC4Q5SXM2 1469 aa32.98■■■□□ 2.87
PDK2-208ENST00000506647 MAGI1Q96QZ7 1491 aaPredicted RBP32.98■■■□□ 2.87
PDK2-208ENST00000506647 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.87
PDK2-208ENST00000506647 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.87
PDK2-208ENST00000506647 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.87
PDK2-208ENST00000506647 FBLN2P98095 1184 aa32.95■■■□□ 2.87
PDK2-208ENST00000506647 ARHGEF11O15085 1522 aa32.95■■■□□ 2.87
PDK2-208ENST00000506647 WRNQ14191 1432 aaPredicted RBP eCLIP32.92■■■□□ 2.86
PDK2-208ENST00000506647 GAPVD1Q14C86 1478 aa32.91■■■□□ 2.86
PDK2-208ENST00000506647 TOP2BQ02880 1626 aa32.89■■■□□ 2.86
PDK2-208ENST00000506647 BIVM-ERCC5R4GMW8 1640 aa32.87■■■□□ 2.85
PDK2-208ENST00000506647 CHMP7Q8WUX9 453 aaPredicted RBP32.85■■■□□ 2.85
PDK2-208ENST00000506647 SYNJ2O15056 1496 aa32.85■■■□□ 2.85
PDK2-208ENST00000506647 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
PDK2-208ENST00000506647 SYNJ1O43426 1573 aa32.81■■■□□ 2.84
PDK2-208ENST00000506647 PBRM1Q86U86 1689 aa32.76■■■□□ 2.84
PDK2-208ENST00000506647 CLASP1Q7Z460 1538 aa32.76■■■□□ 2.83
PDK2-208ENST00000506647 ARAP1Q96P48 1450 aa32.65■■■□□ 2.82
PDK2-208ENST00000506647 CYB5RLQ6IPT4 315 aa32.64■■■□□ 2.82
PDK2-208ENST00000506647 ERICH3Q5RHP9 1530 aa32.57■■■□□ 2.8
PDK2-208ENST00000506647 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
PDK2-208ENST00000506647 ADAMTS12P58397 1594 aa32.55■■■□□ 2.8
PDK2-208ENST00000506647 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
PDK2-208ENST00000506647 NUP160Q12769 1436 aa32.49■■■□□ 2.79
PDK2-208ENST00000506647 CEP170Q5SW79 1584 aa32.38■■■□□ 2.77
PDK2-208ENST00000506647 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
PDK2-208ENST00000506647 SHROOM2Q13796 1616 aa32.26■■■□□ 2.76
PDK2-208ENST00000506647 IGF1RP08069 1367 aa32.26■■■□□ 2.75
PDK2-208ENST00000506647 ERCC6L2Q5T890 1561 aa32.19■■■□□ 2.74
PDK2-208ENST00000506647 JPH4Q96JJ6 628 aa32.12■■■□□ 2.73
PDK2-208ENST00000506647 TRHP20396 242 aaPredicted RBP32.11■■■□□ 2.73
PDK2-208ENST00000506647 CUL7Q14999 1698 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 368.2 ms