RNA–Protein interactions for RNA: ENST00000506572.5

CCNB1-204, Transcript of cyclin B1, humanhuman

TSL 1 (best)

Gene CCNB1, Length 1,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1-204ENST00000506572 NISCHQ9Y2I1 1504 aa37.21■■■■□ 3.55
CCNB1-204ENST00000506572 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
CCNB1-204ENST00000506572 ABCC9O60706 1549 aa32.49■■■□□ 2.79
CCNB1-204ENST00000506572 RB1CC1Q8TDY2 1594 aa31.21■■■□□ 2.59
CCNB1-204ENST00000506572 DCAF8L2P0C7V8 631 aa31.19■■■□□ 2.58
CCNB1-204ENST00000506572 NACADO15069 1562 aa31.13■■■□□ 2.57
CCNB1-204ENST00000506572 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
CCNB1-204ENST00000506572 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
CCNB1-204ENST00000506572 DCAF1Q9Y4B6 1507 aa30.74■■■□□ 2.51
CCNB1-204ENST00000506572 UNC13AQ9UPW8 1703 aa30.53■■■□□ 2.48
CCNB1-204ENST00000506572 PABPN1Q86U42 306 aaKnown RBP eCLIP30.35■■■□□ 2.45
CCNB1-204ENST00000506572 SCRIBQ14160 1630 aa30.26■■■□□ 2.43
CCNB1-204ENST00000506572 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
CCNB1-204ENST00000506572 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
CCNB1-204ENST00000506572 DNAJC5BQ9UF47 199 aa29.83■■■□□ 2.37
CCNB1-204ENST00000506572 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
CCNB1-204ENST00000506572 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
CCNB1-204ENST00000506572 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
CCNB1-204ENST00000506572 SMARCA4P51532 1647 aa28.9■■■□□ 2.22
CCNB1-204ENST00000506572 BAZ1AQ9NRL2 1556 aaPredicted RBP28.85■■■□□ 2.21
CCNB1-204ENST00000506572 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
CCNB1-204ENST00000506572 SMARCA2P51531 1590 aa28.71■■■□□ 2.19
CCNB1-204ENST00000506572 NCAPD3P42695 1498 aa28.71■■■□□ 2.19
CCNB1-204ENST00000506572 MROH2BQ7Z745 1585 aa28.69■■■□□ 2.18
CCNB1-204ENST00000506572 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
CCNB1-204ENST00000506572 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
CCNB1-204ENST00000506572 BAZ1BQ9UIG0 1483 aaKnown RBP28.52■■■□□ 2.16
CCNB1-204ENST00000506572 WIZO95785 1651 aa28.41■■■□□ 2.14
CCNB1-204ENST00000506572 RSF1Q96T23 1441 aaPredicted RBP28.33■■■□□ 2.13
CCNB1-204ENST00000506572 NESP48681 1621 aa28.09■■■□□ 2.09
CCNB1-204ENST00000506572 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
CCNB1-204ENST00000506572 ERCC6Q03468 1493 aa28.01■■■□□ 2.08
CCNB1-204ENST00000506572 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
CCNB1-204ENST00000506572 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
CCNB1-204ENST00000506572 PDS5BQ9NTI5 1447 aa27.8■■■□□ 2.04
CCNB1-204ENST00000506572 KIF21AQ7Z4S6 1674 aa27.78■■■□□ 2.04
CCNB1-204ENST00000506572 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
CCNB1-204ENST00000506572 CFTRP13569 1480 aa27.71■■■□□ 2.03
CCNB1-204ENST00000506572 CUX2O14529 1486 aa27.69■■■□□ 2.02
CCNB1-204ENST00000506572 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
CCNB1-204ENST00000506572 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.01
CCNB1-204ENST00000506572 FANCD2Q9BXW9 1451 aa27.59■■■□□ 2.01
CCNB1-204ENST00000506572 CEP164Q9UPV0 1460 aa27.57■■■□□ 2
CCNB1-204ENST00000506572 PRDM2Q13029 1718 aa27.55■■■□□ 2
CCNB1-204ENST00000506572 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
CCNB1-204ENST00000506572 WDR62O43379 1518 aa27.43■■□□□ 1.98
CCNB1-204ENST00000506572 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
CCNB1-204ENST00000506572 TOPBP1Q92547 1522 aa27.14■■□□□ 1.93
CCNB1-204ENST00000506572 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
CCNB1-204ENST00000506572 DNMBPQ6XZF7 1577 aa27.11■■□□□ 1.93
CCNB1-204ENST00000506572 IFT140Q96RY7 1462 aa26.97■■□□□ 1.91
CCNB1-204ENST00000506572 CUX1P39880 1505 aa26.92■■□□□ 1.9
CCNB1-204ENST00000506572 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
CCNB1-204ENST00000506572 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
CCNB1-204ENST00000506572 ZNF608Q9ULD9 1512 aaPredicted RBP26.87■■□□□ 1.89
CCNB1-204ENST00000506572 TARBP1Q13395 1621 aaKnown RBP26.85■■□□□ 1.89
CCNB1-204ENST00000506572 FGD5Q6ZNL6 1462 aa26.84■■□□□ 1.89
CCNB1-204ENST00000506572 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
CCNB1-204ENST00000506572 SOGA1O94964 1423 aa26.79■■□□□ 1.88
CCNB1-204ENST00000506572 EIF4G3O43432 1585 aaKnown RBP26.78■■□□□ 1.88
CCNB1-204ENST00000506572 WRNQ14191 1432 aaPredicted RBP eCLIP26.72■■□□□ 1.87
CCNB1-204ENST00000506572 AQRO60306 1485 aaKnown RBP eCLIP26.72■■□□□ 1.873e-9■■■■□ 24.9
CCNB1-204ENST00000506572 SYNJ1O43426 1573 aa26.68■■□□□ 1.86
CCNB1-204ENST00000506572 TOP2BQ02880 1626 aa26.67■■□□□ 1.86
CCNB1-204ENST00000506572 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
CCNB1-204ENST00000506572 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
CCNB1-204ENST00000506572 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
CCNB1-204ENST00000506572 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
CCNB1-204ENST00000506572 OSCARQ8IYS5 282 aa26.54■■□□□ 1.84
CCNB1-204ENST00000506572 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
CCNB1-204ENST00000506572 GRIN2BQ13224 1484 aa26.48■■□□□ 1.83
CCNB1-204ENST00000506572 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
CCNB1-204ENST00000506572 CHD1O14646 1710 aa26.48■■□□□ 1.83
CCNB1-204ENST00000506572 PBRM1Q86U86 1689 aa26.48■■□□□ 1.83
CCNB1-204ENST00000506572 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
CCNB1-204ENST00000506572 FBLN2P98095 1184 aa26.45■■□□□ 1.83
CCNB1-204ENST00000506572 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
CCNB1-204ENST00000506572 CHMP7Q8WUX9 453 aaPredicted RBP26.34■■□□□ 1.81
CCNB1-204ENST00000506572 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
CCNB1-204ENST00000506572 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
CCNB1-204ENST00000506572 ADAMTS12P58397 1594 aa26.24■■□□□ 1.79
CCNB1-204ENST00000506572 KIF27Q86VH2 1401 aa26.17■■□□□ 1.78
CCNB1-204ENST00000506572 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
CCNB1-204ENST00000506572 RIMBP3CA6NJZ7 1639 aa26.16■■□□□ 1.78
CCNB1-204ENST00000506572 RIMBP3BA6NNM3 1639 aa26.16■■□□□ 1.78
CCNB1-204ENST00000506572 RIMBP3Q9UFD9 1639 aa26.16■■□□□ 1.78
CCNB1-204ENST00000506572 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
CCNB1-204ENST00000506572 CLASP1Q7Z460 1538 aa26.14■■□□□ 1.77
CCNB1-204ENST00000506572 ARHGEF11O15085 1522 aa26.13■■□□□ 1.77
CCNB1-204ENST00000506572 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
CCNB1-204ENST00000506572 IGF1RP08069 1367 aa26.05■■□□□ 1.76
CCNB1-204ENST00000506572 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
CCNB1-204ENST00000506572 CUL7Q14999 1698 aa26.02■■□□□ 1.76
CCNB1-204ENST00000506572 NUP160Q12769 1436 aa26.01■■□□□ 1.75
CCNB1-204ENST00000506572 RUSC2Q8N2Y8 1516 aa25.94■■□□□ 1.74
CCNB1-204ENST00000506572 CARMIL1Q5VZK9 1371 aa25.91■■□□□ 1.74
CCNB1-204ENST00000506572 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
CCNB1-204ENST00000506572 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
CCNB1-204ENST00000506572 SHROOM2Q13796 1616 aa25.84■■□□□ 1.73
CCNB1-204ENST00000506572 ERCC6L2Q5T890 1561 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms