RNA–Protein interactions for RNA: ENST00000506558.2

PMS2P7-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 7, humanhuman

BASIC

Gene PMS2P7, Length 1,336 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P7-201ENST00000506558 NISCHQ9Y2I1 1504 aa42.88■■■■■ 4.46
PMS2P7-201ENST00000506558 ABCC9O60706 1549 aa38.74■■■■□ 3.79
PMS2P7-201ENST00000506558 CCDC180Q9P1Z9 1646 aa38.51■■■■□ 3.76
PMS2P7-201ENST00000506558 RB1CC1Q8TDY2 1594 aa36.8■■■■□ 3.48
PMS2P7-201ENST00000506558 DNAJC5BQ9UF47 199 aa36.53■■■■□ 3.44
PMS2P7-201ENST00000506558 NACADO15069 1562 aa36.51■■■■□ 3.44
PMS2P7-201ENST00000506558 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
PMS2P7-201ENST00000506558 PABPN1Q86U42 306 aaKnown RBP eCLIP36.09■■■■□ 3.37
PMS2P7-201ENST00000506558 MYO15BQ96JP2 1530 aa35.95■■■■□ 3.35
PMS2P7-201ENST00000506558 UNC13AQ9UPW8 1703 aa35.86■■■■□ 3.33
PMS2P7-201ENST00000506558 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
PMS2P7-201ENST00000506558 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
PMS2P7-201ENST00000506558 DCAF1Q9Y4B6 1507 aa35.41■■■■□ 3.26
PMS2P7-201ENST00000506558 SHROOM4Q9ULL8 1493 aa35.24■■■■□ 3.23
PMS2P7-201ENST00000506558 SCRIBQ14160 1630 aa35.09■■■■□ 3.21
PMS2P7-201ENST00000506558 CC2D2AQ9P2K1 1620 aa34.96■■■■□ 3.19
PMS2P7-201ENST00000506558 CECR2Q9BXF3 1484 aa34.94■■■■□ 3.18
PMS2P7-201ENST00000506558 EIF4G1Q04637 1599 aaKnown RBP34.84■■■■□ 3.17
PMS2P7-201ENST00000506558 NCAPD3P42695 1498 aa33.73■■■□□ 2.99
PMS2P7-201ENST00000506558 DNAJC5Q9H3Z4 198 aa33.73■■■□□ 2.99
PMS2P7-201ENST00000506558 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
PMS2P7-201ENST00000506558 ERCC6Q03468 1493 aa33.5■■■□□ 2.95
PMS2P7-201ENST00000506558 CUX2O14529 1486 aa33.49■■■□□ 2.95
PMS2P7-201ENST00000506558 SMARCA2P51531 1590 aa33.48■■■□□ 2.95
PMS2P7-201ENST00000506558 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
PMS2P7-201ENST00000506558 HMGXB3Q12766 1538 aa33.42■■■□□ 2.94
PMS2P7-201ENST00000506558 BAZ1AQ9NRL2 1556 aaPredicted RBP33.31■■■□□ 2.92
PMS2P7-201ENST00000506558 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
PMS2P7-201ENST00000506558 NESP48681 1621 aa33.21■■■□□ 2.91
PMS2P7-201ENST00000506558 PEG3Q9GZU2 1588 aa33.15■■■□□ 2.9
PMS2P7-201ENST00000506558 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
PMS2P7-201ENST00000506558 LAMC3Q9Y6N6 1575 aa32.97■■■□□ 2.87
PMS2P7-201ENST00000506558 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
PMS2P7-201ENST00000506558 PDS5BQ9NTI5 1447 aa32.85■■■□□ 2.85
PMS2P7-201ENST00000506558 KIF21AQ7Z4S6 1674 aa32.73■■■□□ 2.83
PMS2P7-201ENST00000506558 CADPSQ9ULU8 1353 aa32.72■■■□□ 2.83
PMS2P7-201ENST00000506558 WIZO95785 1651 aa32.59■■■□□ 2.81
PMS2P7-201ENST00000506558 MRC2Q9UBG0 1479 aa32.52■■■□□ 2.8
PMS2P7-201ENST00000506558 WDR62O43379 1518 aa32.41■■■□□ 2.78
PMS2P7-201ENST00000506558 CEP164Q9UPV0 1460 aa32.36■■■□□ 2.77
PMS2P7-201ENST00000506558 FANCD2Q9BXW9 1451 aa32.31■■■□□ 2.76
PMS2P7-201ENST00000506558 RSF1Q96T23 1441 aaPredicted RBP32.31■■■□□ 2.76
PMS2P7-201ENST00000506558 CFTRP13569 1480 aa32.27■■■□□ 2.76
PMS2P7-201ENST00000506558 TOP2AP11388 1531 aaKnown RBP32.2■■■□□ 2.74
PMS2P7-201ENST00000506558 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
PMS2P7-201ENST00000506558 URB2Q14146 1524 aaKnown RBP32.03■■■□□ 2.72
PMS2P7-201ENST00000506558 OSCARQ8IYS5 282 aa32.02■■■□□ 2.72
PMS2P7-201ENST00000506558 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
PMS2P7-201ENST00000506558 PRDM2Q13029 1718 aa31.84■■■□□ 2.69
PMS2P7-201ENST00000506558 IFT140Q96RY7 1462 aa31.74■■■□□ 2.67
PMS2P7-201ENST00000506558 TOPBP1Q92547 1522 aa31.67■■■□□ 2.66
PMS2P7-201ENST00000506558 ZNF608Q9ULD9 1512 aaPredicted RBP31.67■■■□□ 2.66
PMS2P7-201ENST00000506558 ABCC8Q09428 1581 aa31.64■■■□□ 2.66
PMS2P7-201ENST00000506558 DNMBPQ6XZF7 1577 aa31.52■■■□□ 2.64
PMS2P7-201ENST00000506558 RIMBP3CA6NJZ7 1639 aa31.48■■■□□ 2.63
PMS2P7-201ENST00000506558 RIMBP3BA6NNM3 1639 aa31.48■■■□□ 2.63
PMS2P7-201ENST00000506558 RIMBP3Q9UFD9 1639 aa31.48■■■□□ 2.63
PMS2P7-201ENST00000506558 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
PMS2P7-201ENST00000506558 AQRO60306 1485 aaKnown RBP eCLIP31.4■■■□□ 2.623e-7■■■■■ 30.5
PMS2P7-201ENST00000506558 ARHGEF11O15085 1522 aa31.38■■■□□ 2.61
PMS2P7-201ENST00000506558 TARBP1Q13395 1621 aaKnown RBP31.36■■■□□ 2.61
PMS2P7-201ENST00000506558 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
PMS2P7-201ENST00000506558 FBLN2P98095 1184 aa31.29■■■□□ 2.6
PMS2P7-201ENST00000506558 CYB5RLQ6IPT4 315 aa31.26■■■□□ 2.6
PMS2P7-201ENST00000506558 SOGA1O94964 1423 aa31.24■■■□□ 2.59
PMS2P7-201ENST00000506558 CHD1O14646 1710 aa31.23■■■□□ 2.59
PMS2P7-201ENST00000506558 RAD54L2Q9Y4B4 1467 aa31.23■■■□□ 2.59
PMS2P7-201ENST00000506558 TDRD9Q8NDG6 1382 aaKnown RBP31.19■■■□□ 2.58
PMS2P7-201ENST00000506558 FGD5Q6ZNL6 1462 aa31.11■■■□□ 2.57
PMS2P7-201ENST00000506558 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
PMS2P7-201ENST00000506558 ARAP1Q96P48 1450 aa31.05■■■□□ 2.56
PMS2P7-201ENST00000506558 CHMP7Q8WUX9 453 aaPredicted RBP31.04■■■□□ 2.56
PMS2P7-201ENST00000506558 SNAPC4Q5SXM2 1469 aa31.04■■■□□ 2.56
PMS2P7-201ENST00000506558 CUX1P39880 1505 aa31.03■■■□□ 2.56
PMS2P7-201ENST00000506558 TRHP20396 242 aaPredicted RBP30.99■■■□□ 2.55
PMS2P7-201ENST00000506558 MAGI1Q96QZ7 1491 aaPredicted RBP30.98■■■□□ 2.55
PMS2P7-201ENST00000506558 GRIN2BQ13224 1484 aa30.97■■■□□ 2.55
PMS2P7-201ENST00000506558 SYNJ1O43426 1573 aa30.91■■■□□ 2.54
PMS2P7-201ENST00000506558 CLASP1Q7Z460 1538 aa30.89■■■□□ 2.54
PMS2P7-201ENST00000506558 SYNJ2O15056 1496 aa30.88■■■□□ 2.53
PMS2P7-201ENST00000506558 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
PMS2P7-201ENST00000506558 SUPT5HO00267 1087 aaKnown RBP30.81■■■□□ 2.52
PMS2P7-201ENST00000506558 ABCA10Q8WWZ4 1543 aa30.76■■■□□ 2.51
PMS2P7-201ENST00000506558 PBRM1Q86U86 1689 aa30.73■■■□□ 2.51
PMS2P7-201ENST00000506558 ABCA5Q8WWZ7 1642 aa30.67■■■□□ 2.5
PMS2P7-201ENST00000506558 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
PMS2P7-201ENST00000506558 GRIN2AQ12879 1464 aa30.54■■■□□ 2.48
PMS2P7-201ENST00000506558 TOP2BQ02880 1626 aa30.49■■■□□ 2.47
PMS2P7-201ENST00000506558 BIVM-ERCC5R4GMW8 1640 aa30.46■■■□□ 2.47
PMS2P7-201ENST00000506558 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
PMS2P7-201ENST00000506558 NUP160Q12769 1436 aa30.45■■■□□ 2.47
PMS2P7-201ENST00000506558 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
PMS2P7-201ENST00000506558 CEP170Q5SW79 1584 aa30.4■■■□□ 2.46
PMS2P7-201ENST00000506558 ERCC6L2Q5T890 1561 aa30.39■■■□□ 2.46
PMS2P7-201ENST00000506558 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
PMS2P7-201ENST00000506558 SHROOM2Q13796 1616 aa30.29■■■□□ 2.44
PMS2P7-201ENST00000506558 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
PMS2P7-201ENST00000506558 JPH4Q96JJ6 628 aa30.22■■■□□ 2.43
PMS2P7-201ENST00000506558 PRG4Q92954 1404 aaPredicted RBP30.21■■■□□ 2.43
PMS2P7-201ENST00000506558 NPM1P06748 294 aaKnown RBP eCLIP30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 324.2 ms