RNA–Protein interactions for RNA: ENST00000506555.5

CCND3-210, Transcript of cyclin D3, humanhuman

TSL 3

Gene CCND3, Length 308 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-210ENST00000506555 NISCHQ9Y2I1 1504 aa30.86■■■□□ 2.53
CCND3-210ENST00000506555 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
CCND3-210ENST00000506555 ABCC9O60706 1549 aa27.55■■■□□ 2
CCND3-210ENST00000506555 RB1CC1Q8TDY2 1594 aa26.25■■□□□ 1.79
CCND3-210ENST00000506555 NACADO15069 1562 aa26.11■■□□□ 1.77
CCND3-210ENST00000506555 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
CCND3-210ENST00000506555 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
CCND3-210ENST00000506555 MYO15BQ96JP2 1530 aa25.8■■□□□ 1.72
CCND3-210ENST00000506555 PABPN1Q86U42 306 aaKnown RBP eCLIP25.7■■□□□ 1.7
CCND3-210ENST00000506555 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
CCND3-210ENST00000506555 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
CCND3-210ENST00000506555 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
CCND3-210ENST00000506555 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
CCND3-210ENST00000506555 SHROOM4Q9ULL8 1493 aa25.16■■□□□ 1.62
CCND3-210ENST00000506555 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
CCND3-210ENST00000506555 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
CCND3-210ENST00000506555 EIF4G1Q04637 1599 aaKnown RBP24.86■■□□□ 1.57
CCND3-210ENST00000506555 CECR2Q9BXF3 1484 aa24.82■■□□□ 1.56
CCND3-210ENST00000506555 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
CCND3-210ENST00000506555 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
CCND3-210ENST00000506555 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
CCND3-210ENST00000506555 SMARCA2P51531 1590 aa23.97■■□□□ 1.43
CCND3-210ENST00000506555 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
CCND3-210ENST00000506555 HMGXB3Q12766 1538 aa23.92■■□□□ 1.42
CCND3-210ENST00000506555 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
CCND3-210ENST00000506555 PEG3Q9GZU2 1588 aa23.81■■□□□ 1.4
CCND3-210ENST00000506555 ERCC6Q03468 1493 aa23.77■■□□□ 1.4
CCND3-210ENST00000506555 MROH2BQ7Z745 1585 aa23.77■■□□□ 1.4
CCND3-210ENST00000506555 CUX2O14529 1486 aa23.7■■□□□ 1.38
CCND3-210ENST00000506555 NESP48681 1621 aa23.69■■□□□ 1.38
CCND3-210ENST00000506555 DNAJC5Q9H3Z4 198 aa23.64■■□□□ 1.37
CCND3-210ENST00000506555 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
CCND3-210ENST00000506555 WIZO95785 1651 aa23.46■■□□□ 1.35
CCND3-210ENST00000506555 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
CCND3-210ENST00000506555 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
CCND3-210ENST00000506555 THOC2Q8NI27 1593 aaKnown RBP23.4■■□□□ 1.34
CCND3-210ENST00000506555 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
CCND3-210ENST00000506555 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
CCND3-210ENST00000506555 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
CCND3-210ENST00000506555 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
CCND3-210ENST00000506555 CFTRP13569 1480 aa23.14■■□□□ 1.29
CCND3-210ENST00000506555 WDR62O43379 1518 aa23.13■■□□□ 1.29
CCND3-210ENST00000506555 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
CCND3-210ENST00000506555 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
CCND3-210ENST00000506555 CCDC88BA6NC98 1476 aa22.96■■□□□ 1.27
CCND3-210ENST00000506555 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
CCND3-210ENST00000506555 PRDM2Q13029 1718 aa22.82■■□□□ 1.24
CCND3-210ENST00000506555 TOPBP1Q92547 1522 aa22.68■■□□□ 1.22
CCND3-210ENST00000506555 OSCARQ8IYS5 282 aa22.68■■□□□ 1.22
CCND3-210ENST00000506555 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
CCND3-210ENST00000506555 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
CCND3-210ENST00000506555 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
CCND3-210ENST00000506555 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
CCND3-210ENST00000506555 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
CCND3-210ENST00000506555 EIF4G3O43432 1585 aaKnown RBP22.46■■□□□ 1.19
CCND3-210ENST00000506555 TARBP1Q13395 1621 aaKnown RBP22.46■■□□□ 1.19
CCND3-210ENST00000506555 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
CCND3-210ENST00000506555 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.188e-7■■■■■ 32.9
CCND3-210ENST00000506555 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
CCND3-210ENST00000506555 SUPT5HO00267 1087 aaKnown RBP22.38■■□□□ 1.17
CCND3-210ENST00000506555 SOGA1O94964 1423 aa22.38■■□□□ 1.17
CCND3-210ENST00000506555 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
CCND3-210ENST00000506555 FGD5Q6ZNL6 1462 aa22.33■■□□□ 1.16
CCND3-210ENST00000506555 CUX1P39880 1505 aa22.32■■□□□ 1.16
CCND3-210ENST00000506555 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
CCND3-210ENST00000506555 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
CCND3-210ENST00000506555 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
CCND3-210ENST00000506555 FBLN2P98095 1184 aa22.28■■□□□ 1.16
CCND3-210ENST00000506555 ARHGEF11O15085 1522 aa22.26■■□□□ 1.15
CCND3-210ENST00000506555 CHD1O14646 1710 aa22.26■■□□□ 1.15
CCND3-210ENST00000506555 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
CCND3-210ENST00000506555 SNAPC4Q5SXM2 1469 aa22.19■■□□□ 1.14
CCND3-210ENST00000506555 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
CCND3-210ENST00000506555 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
CCND3-210ENST00000506555 CYB5RLQ6IPT4 315 aa22.14■■□□□ 1.13
CCND3-210ENST00000506555 CHMP7Q8WUX9 453 aaPredicted RBP22.14■■□□□ 1.13
CCND3-210ENST00000506555 GAPVD1Q14C86 1478 aa22.09■■□□□ 1.13
CCND3-210ENST00000506555 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
CCND3-210ENST00000506555 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
CCND3-210ENST00000506555 ARAP1Q96P48 1450 aa22.06■■□□□ 1.12
CCND3-210ENST00000506555 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
CCND3-210ENST00000506555 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
CCND3-210ENST00000506555 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
CCND3-210ENST00000506555 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.11
CCND3-210ENST00000506555 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
CCND3-210ENST00000506555 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
CCND3-210ENST00000506555 BIVM-ERCC5R4GMW8 1640 aa21.97■■□□□ 1.11
CCND3-210ENST00000506555 GRIN2AQ12879 1464 aa21.87■■□□□ 1.09
CCND3-210ENST00000506555 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
CCND3-210ENST00000506555 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
CCND3-210ENST00000506555 FHAD1B1AJZ9 1412 aa21.83■■□□□ 1.09
CCND3-210ENST00000506555 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
CCND3-210ENST00000506555 NUP160Q12769 1436 aa21.8■■□□□ 1.08
CCND3-210ENST00000506555 CEP170Q5SW79 1584 aa21.77■■□□□ 1.08
CCND3-210ENST00000506555 ERCC6L2Q5T890 1561 aa21.71■■□□□ 1.07
CCND3-210ENST00000506555 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
CCND3-210ENST00000506555 JPH4Q96JJ6 628 aa21.62■■□□□ 1.05
CCND3-210ENST00000506555 IGF1RP08069 1367 aa21.6■■□□□ 1.05
CCND3-210ENST00000506555 PRG4Q92954 1404 aaPredicted RBP21.59■■□□□ 1.05
CCND3-210ENST00000506555 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms