RNA–Protein interactions for RNA: ENST00000506489.1

CDK18-216, Transcript of cyclin dependent kinase 18, humanhuman

TSL 4

Gene CDK18, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-216ENST00000506489 NISCHQ9Y2I1 1504 aa51.04■■■■■ 5.76
CDK18-216ENST00000506489 CCDC180Q9P1Z9 1646 aa45.59■■■■■ 4.89
CDK18-216ENST00000506489 ABCC9O60706 1549 aa45.08■■■■■ 4.81
CDK18-216ENST00000506489 RB1CC1Q8TDY2 1594 aa43.16■■■■■ 4.5
CDK18-216ENST00000506489 NACADO15069 1562 aa42.99■■■■■ 4.47
CDK18-216ENST00000506489 DCAF8L2P0C7V8 631 aa42.89■■■■■ 4.46
CDK18-216ENST00000506489 MYO15BQ96JP2 1530 aa42.56■■■■■ 4.4
CDK18-216ENST00000506489 ZCCHC6Q5VYS8 1495 aaKnown RBP42.41■■■■■ 4.38
CDK18-216ENST00000506489 DCAF1Q9Y4B6 1507 aa42.21■■■■■ 4.35
CDK18-216ENST00000506489 UNC13AQ9UPW8 1703 aa42.14■■■■■ 4.34
CDK18-216ENST00000506489 PABPN1Q86U42 306 aaKnown RBP eCLIP42.05■■■■■ 4.32
CDK18-216ENST00000506489 BICRAQ9NZM4 1560 aa41.84■■■■■ 4.29
CDK18-216ENST00000506489 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
CDK18-216ENST00000506489 SCRIBQ14160 1630 aa41.56■■■■■ 4.24
CDK18-216ENST00000506489 SHROOM4Q9ULL8 1493 aa41.39■■■■■ 4.22
CDK18-216ENST00000506489 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
CDK18-216ENST00000506489 CC2D2AQ9P2K1 1620 aa40.75■■■■■ 4.11
CDK18-216ENST00000506489 CECR2Q9BXF3 1484 aa40.56■■■■■ 4.08
CDK18-216ENST00000506489 SMARCA4P51532 1647 aa39.71■■■■□ 3.95
CDK18-216ENST00000506489 NCAPD3P42695 1498 aa39.68■■■■□ 3.94
CDK18-216ENST00000506489 ATAD2BQ9ULI0 1458 aa39.62■■■■□ 3.93
CDK18-216ENST00000506489 BAZ1AQ9NRL2 1556 aaPredicted RBP39.6■■■■□ 3.93
CDK18-216ENST00000506489 SMARCA2P51531 1590 aa39.55■■■■□ 3.92
CDK18-216ENST00000506489 HMGXB3Q12766 1538 aa39.42■■■■□ 3.9
CDK18-216ENST00000506489 MROH2BQ7Z745 1585 aa39.33■■■■□ 3.89
CDK18-216ENST00000506489 PEG3Q9GZU2 1588 aa39.32■■■■□ 3.88
CDK18-216ENST00000506489 BAZ1BQ9UIG0 1483 aaKnown RBP39.28■■■■□ 3.88
CDK18-216ENST00000506489 ERCC6Q03468 1493 aa38.91■■■■□ 3.82
CDK18-216ENST00000506489 WIZO95785 1651 aa38.87■■■■□ 3.81
CDK18-216ENST00000506489 NESP48681 1621 aa38.86■■■■□ 3.81
CDK18-216ENST00000506489 LAMC3Q9Y6N6 1575 aa38.71■■■■□ 3.79
CDK18-216ENST00000506489 RSF1Q96T23 1441 aaPredicted RBP38.71■■■■□ 3.79
CDK18-216ENST00000506489 CUX2O14529 1486 aa38.66■■■■□ 3.78
CDK18-216ENST00000506489 CADPSQ9ULU8 1353 aa38.5■■■■□ 3.75
CDK18-216ENST00000506489 PDS5BQ9NTI5 1447 aa38.48■■■■□ 3.75
CDK18-216ENST00000506489 TOP2AP11388 1531 aaKnown RBP38.44■■■■□ 3.74
CDK18-216ENST00000506489 KIF21AQ7Z4S6 1674 aa38.37■■■■□ 3.73
CDK18-216ENST00000506489 THOC2Q8NI27 1593 aaKnown RBP38.36■■■■□ 3.73
CDK18-216ENST00000506489 CFTRP13569 1480 aa38.15■■■■□ 3.7
CDK18-216ENST00000506489 MRC2Q9UBG0 1479 aa38.09■■■■□ 3.69
CDK18-216ENST00000506489 CEP164Q9UPV0 1460 aa38.06■■■■□ 3.68
CDK18-216ENST00000506489 FANCD2Q9BXW9 1451 aa38.05■■■■□ 3.68
CDK18-216ENST00000506489 DNAJC5Q9H3Z4 198 aa38.05■■■■□ 3.68
CDK18-216ENST00000506489 CCDC88BA6NC98 1476 aa37.99■■■■□ 3.67
CDK18-216ENST00000506489 WDR62O43379 1518 aa37.97■■■■□ 3.67
CDK18-216ENST00000506489 PRDM2Q13029 1718 aa37.81■■■■□ 3.64
CDK18-216ENST00000506489 URB2Q14146 1524 aaKnown RBP37.69■■■■□ 3.62
CDK18-216ENST00000506489 SUPT5HO00267 1087 aaKnown RBP37.39■■■■□ 3.58
CDK18-216ENST00000506489 TOPBP1Q92547 1522 aa37.38■■■■□ 3.57
CDK18-216ENST00000506489 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
CDK18-216ENST00000506489 DNMBPQ6XZF7 1577 aa37.3■■■■□ 3.56
CDK18-216ENST00000506489 IFT140Q96RY7 1462 aa37.28■■■■□ 3.56
CDK18-216ENST00000506489 ZNF608Q9ULD9 1512 aaPredicted RBP37.13■■■■□ 3.53
CDK18-216ENST00000506489 POLA1P09884 1462 aaPredicted RBP37.03■■■■□ 3.52
CDK18-216ENST00000506489 TARBP1Q13395 1621 aaKnown RBP37.01■■■■□ 3.52
CDK18-216ENST00000506489 OSCARQ8IYS5 282 aa37■■■■□ 3.51
CDK18-216ENST00000506489 EIF4G3O43432 1585 aaKnown RBP36.97■■■■□ 3.51
CDK18-216ENST00000506489 CUX1P39880 1505 aa36.92■■■■□ 3.5
CDK18-216ENST00000506489 SOGA1O94964 1423 aa36.89■■■■□ 3.5
CDK18-216ENST00000506489 FGD5Q6ZNL6 1462 aa36.88■■■■□ 3.5
CDK18-216ENST00000506489 AQRO60306 1485 aaKnown RBP eCLIP36.88■■■■□ 3.49
CDK18-216ENST00000506489 RAD54L2Q9Y4B4 1467 aa36.88■■■■□ 3.49
CDK18-216ENST00000506489 TDRD9Q8NDG6 1382 aaKnown RBP36.74■■■■□ 3.47
CDK18-216ENST00000506489 WDR97A6NE52 1622 aa36.7■■■■□ 3.47
CDK18-216ENST00000506489 TRIM41Q8WV44 630 aa36.6■■■■□ 3.45
CDK18-216ENST00000506489 CHD1O14646 1710 aa36.59■■■■□ 3.45
CDK18-216ENST00000506489 FBLN2P98095 1184 aa36.56■■■■□ 3.44
CDK18-216ENST00000506489 SNAPC4Q5SXM2 1469 aa36.53■■■■□ 3.44
CDK18-216ENST00000506489 WRNQ14191 1432 aaPredicted RBP eCLIP36.52■■■■□ 3.44
CDK18-216ENST00000506489 GRIN2BQ13224 1484 aa36.51■■■■□ 3.44
CDK18-216ENST00000506489 ABCA10Q8WWZ4 1543 aa36.49■■■■□ 3.43
CDK18-216ENST00000506489 TOP2BQ02880 1626 aa36.48■■■■□ 3.43
CDK18-216ENST00000506489 BIVM-ERCC5R4GMW8 1640 aa36.48■■■■□ 3.43
CDK18-216ENST00000506489 MAGI1Q96QZ7 1491 aaPredicted RBP36.47■■■■□ 3.43
CDK18-216ENST00000506489 GAPVD1Q14C86 1478 aa36.45■■■■□ 3.43
CDK18-216ENST00000506489 SYNJ1O43426 1573 aa36.44■■■■□ 3.42
CDK18-216ENST00000506489 RIMBP3CA6NJZ7 1639 aa36.43■■■■□ 3.42
CDK18-216ENST00000506489 RIMBP3BA6NNM3 1639 aa36.43■■■■□ 3.42
CDK18-216ENST00000506489 RIMBP3Q9UFD9 1639 aa36.43■■■■□ 3.42
CDK18-216ENST00000506489 PBRM1Q86U86 1689 aa36.39■■■■□ 3.42
CDK18-216ENST00000506489 ABCA5Q8WWZ7 1642 aa36.38■■■■□ 3.41
CDK18-216ENST00000506489 CHMP7Q8WUX9 453 aaPredicted RBP36.38■■■■□ 3.41
CDK18-216ENST00000506489 ARHGEF11O15085 1522 aa36.37■■■■□ 3.41
CDK18-216ENST00000506489 SYNJ2O15056 1496 aa36.33■■■■□ 3.41
CDK18-216ENST00000506489 CLASP1Q7Z460 1538 aa36.19■■■■□ 3.38
CDK18-216ENST00000506489 ADAMTS12P58397 1594 aa36.08■■■■□ 3.37
CDK18-216ENST00000506489 CYB5RLQ6IPT4 315 aa36.08■■■■□ 3.37
CDK18-216ENST00000506489 ERICH3Q5RHP9 1530 aa36.06■■■■□ 3.36
CDK18-216ENST00000506489 ARAP1Q96P48 1450 aa36.05■■■■□ 3.36
CDK18-216ENST00000506489 GRIN2AQ12879 1464 aa36.04■■■■□ 3.36
CDK18-216ENST00000506489 FHAD1B1AJZ9 1412 aa36.01■■■■□ 3.36
CDK18-216ENST00000506489 NUP160Q12769 1436 aa35.9■■■■□ 3.34
CDK18-216ENST00000506489 CEP170Q5SW79 1584 aa35.87■■■■□ 3.33
CDK18-216ENST00000506489 KIF27Q86VH2 1401 aa35.81■■■■□ 3.32
CDK18-216ENST00000506489 IGF1RP08069 1367 aa35.71■■■■□ 3.31
CDK18-216ENST00000506489 SHROOM2Q13796 1616 aa35.67■■■■□ 3.3
CDK18-216ENST00000506489 ERCC6L2Q5T890 1561 aa35.64■■■■□ 3.3
CDK18-216ENST00000506489 CUL7Q14999 1698 aa35.64■■■■□ 3.3
CDK18-216ENST00000506489 JPH4Q96JJ6 628 aa35.55■■■■□ 3.28
CDK18-216ENST00000506489 RUSC2Q8N2Y8 1516 aa35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms