RNA–Protein interactions for RNA: ENST00000506407.1

AC055733.1-201, humanhuman

BASIC

Gene AC055733.1, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055733.1-201ENST00000506407 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
AC055733.1-201ENST00000506407 ABCC9O60706 1549 aa24.01■■□□□ 1.43
AC055733.1-201ENST00000506407 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
AC055733.1-201ENST00000506407 RB1CC1Q8TDY2 1594 aa22.72■■□□□ 1.23
AC055733.1-201ENST00000506407 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
AC055733.1-201ENST00000506407 NACADO15069 1562 aa22.55■■□□□ 1.2
AC055733.1-201ENST00000506407 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
AC055733.1-201ENST00000506407 PABPN1Q86U42 306 aaKnown RBP eCLIP22.41■■□□□ 1.18
AC055733.1-201ENST00000506407 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
AC055733.1-201ENST00000506407 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
AC055733.1-201ENST00000506407 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
AC055733.1-201ENST00000506407 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
AC055733.1-201ENST00000506407 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
AC055733.1-201ENST00000506407 SCRIBQ14160 1630 aa21.88■■□□□ 1.09
AC055733.1-201ENST00000506407 SHROOM4Q9ULL8 1493 aa21.69■■□□□ 1.06
AC055733.1-201ENST00000506407 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
AC055733.1-201ENST00000506407 CECR2Q9BXF3 1484 aa21.58■■□□□ 1.04
AC055733.1-201ENST00000506407 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
AC055733.1-201ENST00000506407 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
AC055733.1-201ENST00000506407 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
AC055733.1-201ENST00000506407 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
AC055733.1-201ENST00000506407 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
AC055733.1-201ENST00000506407 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
AC055733.1-201ENST00000506407 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
AC055733.1-201ENST00000506407 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
AC055733.1-201ENST00000506407 NESP48681 1621 aa20.65■□□□□ 0.9
AC055733.1-201ENST00000506407 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
AC055733.1-201ENST00000506407 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
AC055733.1-201ENST00000506407 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
AC055733.1-201ENST00000506407 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
AC055733.1-201ENST00000506407 CUX2O14529 1486 aa20.55■□□□□ 0.88
AC055733.1-201ENST00000506407 WIZO95785 1651 aa20.35■□□□□ 0.85
AC055733.1-201ENST00000506407 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
AC055733.1-201ENST00000506407 LAMC3Q9Y6N6 1575 aa20.34■□□□□ 0.85
AC055733.1-201ENST00000506407 KIF21AQ7Z4S6 1674 aa20.27■□□□□ 0.84
AC055733.1-201ENST00000506407 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
AC055733.1-201ENST00000506407 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
AC055733.1-201ENST00000506407 RSF1Q96T23 1441 aaPredicted RBP20.2■□□□□ 0.82
AC055733.1-201ENST00000506407 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
AC055733.1-201ENST00000506407 TOP2AP11388 1531 aaKnown RBP20.07■□□□□ 0.8
AC055733.1-201ENST00000506407 WDR62O43379 1518 aa20.06■□□□□ 0.8
AC055733.1-201ENST00000506407 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
AC055733.1-201ENST00000506407 CEP164Q9UPV0 1460 aa20.05■□□□□ 0.8
AC055733.1-201ENST00000506407 CFTRP13569 1480 aa20.03■□□□□ 0.8
AC055733.1-201ENST00000506407 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
AC055733.1-201ENST00000506407 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
AC055733.1-201ENST00000506407 TRIM41Q8WV44 630 aa19.78■□□□□ 0.76
AC055733.1-201ENST00000506407 ZNF608Q9ULD9 1512 aaPredicted RBP19.7■□□□□ 0.74
AC055733.1-201ENST00000506407 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
AC055733.1-201ENST00000506407 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
AC055733.1-201ENST00000506407 OSCARQ8IYS5 282 aa19.64■□□□□ 0.73
AC055733.1-201ENST00000506407 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
AC055733.1-201ENST00000506407 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
AC055733.1-201ENST00000506407 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
AC055733.1-201ENST00000506407 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.71
AC055733.1-201ENST00000506407 ABCC8Q09428 1581 aa19.5■□□□□ 0.71
AC055733.1-201ENST00000506407 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
AC055733.1-201ENST00000506407 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
AC055733.1-201ENST00000506407 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
AC055733.1-201ENST00000506407 SUPT5HO00267 1087 aaKnown RBP19.41■□□□□ 0.7
AC055733.1-201ENST00000506407 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
AC055733.1-201ENST00000506407 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
AC055733.1-201ENST00000506407 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
AC055733.1-201ENST00000506407 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
AC055733.1-201ENST00000506407 SOGA1O94964 1423 aa19.38■□□□□ 0.69
AC055733.1-201ENST00000506407 FBLN2P98095 1184 aa19.38■□□□□ 0.69
AC055733.1-201ENST00000506407 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
AC055733.1-201ENST00000506407 ARHGEF11O15085 1522 aa19.37■□□□□ 0.69
AC055733.1-201ENST00000506407 CUX1P39880 1505 aa19.37■□□□□ 0.69
AC055733.1-201ENST00000506407 CHD1O14646 1710 aa19.32■□□□□ 0.68
AC055733.1-201ENST00000506407 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
AC055733.1-201ENST00000506407 CYB5RLQ6IPT4 315 aa19.26■□□□□ 0.67
AC055733.1-201ENST00000506407 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
AC055733.1-201ENST00000506407 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
AC055733.1-201ENST00000506407 CHMP7Q8WUX9 453 aaPredicted RBP19.18■□□□□ 0.66
AC055733.1-201ENST00000506407 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
AC055733.1-201ENST00000506407 WDR97A6NE52 1622 aa19.15■□□□□ 0.66
AC055733.1-201ENST00000506407 CLASP1Q7Z460 1538 aa19.14■□□□□ 0.65
AC055733.1-201ENST00000506407 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
AC055733.1-201ENST00000506407 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
AC055733.1-201ENST00000506407 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
AC055733.1-201ENST00000506407 ABCA5Q8WWZ7 1642 aa19.07■□□□□ 0.64
AC055733.1-201ENST00000506407 SYNJ1O43426 1573 aa19.07■□□□□ 0.64
AC055733.1-201ENST00000506407 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
AC055733.1-201ENST00000506407 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
AC055733.1-201ENST00000506407 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
AC055733.1-201ENST00000506407 TOP2BQ02880 1626 aa19■□□□□ 0.63
AC055733.1-201ENST00000506407 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
AC055733.1-201ENST00000506407 GRIN2AQ12879 1464 aa18.97■□□□□ 0.63
AC055733.1-201ENST00000506407 ADAMTS12P58397 1594 aa18.95■□□□□ 0.62
AC055733.1-201ENST00000506407 ERCC6L2Q5T890 1561 aa18.93■□□□□ 0.62
AC055733.1-201ENST00000506407 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
AC055733.1-201ENST00000506407 NUP160Q12769 1436 aa18.89■□□□□ 0.61
AC055733.1-201ENST00000506407 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
AC055733.1-201ENST00000506407 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
AC055733.1-201ENST00000506407 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
AC055733.1-201ENST00000506407 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
AC055733.1-201ENST00000506407 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
AC055733.1-201ENST00000506407 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
AC055733.1-201ENST00000506407 IGF1RP08069 1367 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms