RNA–Protein interactions for RNA: ENST00000506399.5

SPOP-210, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 5

Gene SPOP, Length 918 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-210ENST00000506399 NISCHQ9Y2I1 1504 aa42.18■■■■■ 4.34
SPOP-210ENST00000506399 CCDC180Q9P1Z9 1646 aa37.79■■■■□ 3.64
SPOP-210ENST00000506399 ABCC9O60706 1549 aa37.71■■■■□ 3.63
SPOP-210ENST00000506399 RB1CC1Q8TDY2 1594 aa35.95■■■■□ 3.35
SPOP-210ENST00000506399 DCAF8L2P0C7V8 631 aa35.73■■■■□ 3.31
SPOP-210ENST00000506399 NACADO15069 1562 aa35.72■■■■□ 3.31
SPOP-210ENST00000506399 MYO15BQ96JP2 1530 aa35.22■■■■□ 3.23
SPOP-210ENST00000506399 DNAJC5BQ9UF47 199 aa35.2■■■■□ 3.23
SPOP-210ENST00000506399 PABPN1Q86U42 306 aaKnown RBP eCLIP35.16■■■■□ 3.22
SPOP-210ENST00000506399 UNC13AQ9UPW8 1703 aa35.08■■■■□ 3.21
SPOP-210ENST00000506399 ZCCHC6Q5VYS8 1495 aaKnown RBP34.97■■■■□ 3.19
SPOP-210ENST00000506399 DCAF1Q9Y4B6 1507 aa34.81■■■■□ 3.16
SPOP-210ENST00000506399 BICRAQ9NZM4 1560 aa34.81■■■■□ 3.16
SPOP-210ENST00000506399 SCRIBQ14160 1630 aa34.48■■■■□ 3.11
SPOP-210ENST00000506399 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
SPOP-210ENST00000506399 CC2D2AQ9P2K1 1620 aa34.05■■■■□ 3.04
SPOP-210ENST00000506399 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
SPOP-210ENST00000506399 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.03
SPOP-210ENST00000506399 NCAPD3P42695 1498 aa32.95■■■□□ 2.87
SPOP-210ENST00000506399 SMARCA4P51532 1647 aa32.88■■■□□ 2.85
SPOP-210ENST00000506399 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
SPOP-210ENST00000506399 SMARCA2P51531 1590 aa32.82■■■□□ 2.84
SPOP-210ENST00000506399 BAZ1AQ9NRL2 1556 aaPredicted RBP32.76■■■□□ 2.84
SPOP-210ENST00000506399 HMGXB3Q12766 1538 aa32.72■■■□□ 2.83
SPOP-210ENST00000506399 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
SPOP-210ENST00000506399 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
SPOP-210ENST00000506399 PEG3Q9GZU2 1588 aa32.52■■■□□ 2.8
SPOP-210ENST00000506399 MROH2BQ7Z745 1585 aa32.49■■■□□ 2.79
SPOP-210ENST00000506399 CUX2O14529 1486 aa32.43■■■□□ 2.78
SPOP-210ENST00000506399 NESP48681 1621 aa32.4■■■□□ 2.78
SPOP-210ENST00000506399 DNAJC5Q9H3Z4 198 aa32.28■■■□□ 2.76
SPOP-210ENST00000506399 LAMC3Q9Y6N6 1575 aa32.21■■■□□ 2.75
SPOP-210ENST00000506399 WIZO95785 1651 aa32.13■■■□□ 2.73
SPOP-210ENST00000506399 PDS5BQ9NTI5 1447 aa32.07■■■□□ 2.72
SPOP-210ENST00000506399 THOC2Q8NI27 1593 aaKnown RBP32.02■■■□□ 2.72
SPOP-210ENST00000506399 KIF21AQ7Z4S6 1674 aa32■■■□□ 2.71
SPOP-210ENST00000506399 CADPSQ9ULU8 1353 aa31.99■■■□□ 2.71
SPOP-210ENST00000506399 RSF1Q96T23 1441 aaPredicted RBP31.88■■■□□ 2.69
SPOP-210ENST00000506399 MRC2Q9UBG0 1479 aa31.75■■■□□ 2.67
SPOP-210ENST00000506399 TOP2AP11388 1531 aaKnown RBP31.73■■■□□ 2.67
SPOP-210ENST00000506399 CEP164Q9UPV0 1460 aa31.66■■■□□ 2.66
SPOP-210ENST00000506399 FANCD2Q9BXW9 1451 aa31.63■■■□□ 2.65
SPOP-210ENST00000506399 WDR62O43379 1518 aa31.63■■■□□ 2.65
SPOP-210ENST00000506399 CFTRP13569 1480 aa31.62■■■□□ 2.65
SPOP-210ENST00000506399 CCDC88BA6NC98 1476 aa31.38■■■□□ 2.61
SPOP-210ENST00000506399 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
SPOP-210ENST00000506399 PRDM2Q13029 1718 aa31.32■■■□□ 2.61
SPOP-210ENST00000506399 OSCARQ8IYS5 282 aa31.05■■■□□ 2.56
SPOP-210ENST00000506399 TOPBP1Q92547 1522 aa31.03■■■□□ 2.56
SPOP-210ENST00000506399 TRIM41Q8WV44 630 aa31.02■■■□□ 2.56
SPOP-210ENST00000506399 IFT140Q96RY7 1462 aa31.01■■■□□ 2.56
SPOP-210ENST00000506399 ABCC8Q09428 1581 aa31.01■■■□□ 2.56
SPOP-210ENST00000506399 DNMBPQ6XZF7 1577 aa30.93■■■□□ 2.54
SPOP-210ENST00000506399 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
SPOP-210ENST00000506399 EIF4G3O43432 1585 aaKnown RBP30.77■■■□□ 2.52
SPOP-210ENST00000506399 POLA1P09884 1462 aaPredicted RBP30.71■■■□□ 2.51
SPOP-210ENST00000506399 TARBP1Q13395 1621 aaKnown RBP30.71■■■□□ 2.51
SPOP-210ENST00000506399 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.51
SPOP-210ENST00000506399 AQRO60306 1485 aaKnown RBP eCLIP30.7■■■□□ 2.51e-6■■■■■ 27.6
SPOP-210ENST00000506399 SOGA1O94964 1423 aa30.63■■■□□ 2.49
SPOP-210ENST00000506399 RAD54L2Q9Y4B4 1467 aa30.62■■■□□ 2.49
SPOP-210ENST00000506399 FBLN2P98095 1184 aa30.58■■■□□ 2.49
SPOP-210ENST00000506399 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
SPOP-210ENST00000506399 RIMBP3CA6NJZ7 1639 aa30.55■■■□□ 2.48
SPOP-210ENST00000506399 RIMBP3BA6NNM3 1639 aa30.55■■■□□ 2.48
SPOP-210ENST00000506399 RIMBP3Q9UFD9 1639 aa30.55■■■□□ 2.48
SPOP-210ENST00000506399 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
SPOP-210ENST00000506399 CHD1O14646 1710 aa30.53■■■□□ 2.48
SPOP-210ENST00000506399 CUX1P39880 1505 aa30.52■■■□□ 2.48
SPOP-210ENST00000506399 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
SPOP-210ENST00000506399 WDR97A6NE52 1622 aa30.44■■■□□ 2.46
SPOP-210ENST00000506399 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
SPOP-210ENST00000506399 CHMP7Q8WUX9 453 aaPredicted RBP30.35■■■□□ 2.45
SPOP-210ENST00000506399 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
SPOP-210ENST00000506399 CYB5RLQ6IPT4 315 aa30.32■■■□□ 2.44
SPOP-210ENST00000506399 MAGI1Q96QZ7 1491 aaPredicted RBP30.31■■■□□ 2.44
SPOP-210ENST00000506399 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
SPOP-210ENST00000506399 SYNJ1O43426 1573 aa30.21■■■□□ 2.43
SPOP-210ENST00000506399 PBRM1Q86U86 1689 aa30.2■■■□□ 2.43
SPOP-210ENST00000506399 SYNJ2O15056 1496 aa30.2■■■□□ 2.43
SPOP-210ENST00000506399 ABCA10Q8WWZ4 1543 aa30.2■■■□□ 2.42
SPOP-210ENST00000506399 ARAP1Q96P48 1450 aa30.16■■■□□ 2.42
SPOP-210ENST00000506399 WRNQ14191 1432 aaPredicted RBP eCLIP30.15■■■□□ 2.42
SPOP-210ENST00000506399 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
SPOP-210ENST00000506399 ABCA5Q8WWZ7 1642 aa30.12■■■□□ 2.41
SPOP-210ENST00000506399 TOP2BQ02880 1626 aa30.08■■■□□ 2.41
SPOP-210ENST00000506399 BIVM-ERCC5R4GMW8 1640 aa30.07■■■□□ 2.4
SPOP-210ENST00000506399 TRHP20396 242 aaPredicted RBP30.01■■■□□ 2.39
SPOP-210ENST00000506399 GRIN2AQ12879 1464 aa29.93■■■□□ 2.38
SPOP-210ENST00000506399 ADAMTS12P58397 1594 aa29.9■■■□□ 2.38
SPOP-210ENST00000506399 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
SPOP-210ENST00000506399 ERICH3Q5RHP9 1530 aa29.84■■■□□ 2.37
SPOP-210ENST00000506399 NUP160Q12769 1436 aa29.79■■■□□ 2.36
SPOP-210ENST00000506399 CEP170Q5SW79 1584 aa29.78■■■□□ 2.36
SPOP-210ENST00000506399 ERCC6L2Q5T890 1561 aa29.69■■■□□ 2.34
SPOP-210ENST00000506399 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
SPOP-210ENST00000506399 KIF27Q86VH2 1401 aa29.56■■■□□ 2.32
SPOP-210ENST00000506399 JPH4Q96JJ6 628 aa29.56■■■□□ 2.32
SPOP-210ENST00000506399 PRG4Q92954 1404 aaPredicted RBP29.55■■■□□ 2.32
SPOP-210ENST00000506399 IGF1RP08069 1367 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms