RNA–Protein interactions for RNA: ENST00000506303.1

TROVE2-211, Transcript of TROVE domain family member 2, humanhuman

TSL 3

Gene TROVE2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2-211ENST00000506303 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
TROVE2-211ENST00000506303 ABCC9O60706 1549 aa24.52■■□□□ 1.52
TROVE2-211ENST00000506303 CCDC180Q9P1Z9 1646 aa24.48■■□□□ 1.51
TROVE2-211ENST00000506303 RB1CC1Q8TDY2 1594 aa23.34■■□□□ 1.33
TROVE2-211ENST00000506303 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
TROVE2-211ENST00000506303 NACADO15069 1562 aa23.17■■□□□ 1.3
TROVE2-211ENST00000506303 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
TROVE2-211ENST00000506303 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
TROVE2-211ENST00000506303 UNC13AQ9UPW8 1703 aa22.84■■□□□ 1.25
TROVE2-211ENST00000506303 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
TROVE2-211ENST00000506303 BICRAQ9NZM4 1560 aa22.69■■□□□ 1.22
TROVE2-211ENST00000506303 ZCCHC6Q5VYS8 1495 aaKnown RBP22.52■■□□□ 1.2
TROVE2-211ENST00000506303 DCAF1Q9Y4B6 1507 aa22.52■■□□□ 1.19
TROVE2-211ENST00000506303 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
TROVE2-211ENST00000506303 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
TROVE2-211ENST00000506303 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
TROVE2-211ENST00000506303 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
TROVE2-211ENST00000506303 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
TROVE2-211ENST00000506303 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
TROVE2-211ENST00000506303 DNAJC5Q9H3Z4 198 aa21.39■■□□□ 1.01
TROVE2-211ENST00000506303 ATAD2BQ9ULI0 1458 aa21.3■■□□□ 1
TROVE2-211ENST00000506303 CUX2O14529 1486 aa21.25■□□□□ 0.99
TROVE2-211ENST00000506303 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
TROVE2-211ENST00000506303 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
TROVE2-211ENST00000506303 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
TROVE2-211ENST00000506303 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
TROVE2-211ENST00000506303 ERCC6Q03468 1493 aa21.17■□□□□ 0.98
TROVE2-211ENST00000506303 BAZ1AQ9NRL2 1556 aaPredicted RBP21.12■□□□□ 0.97
TROVE2-211ENST00000506303 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
TROVE2-211ENST00000506303 NESP48681 1621 aa21.05■□□□□ 0.96
TROVE2-211ENST00000506303 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
TROVE2-211ENST00000506303 MROH2BQ7Z745 1585 aa20.94■□□□□ 0.94
TROVE2-211ENST00000506303 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
TROVE2-211ENST00000506303 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.93
TROVE2-211ENST00000506303 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
TROVE2-211ENST00000506303 KIF21AQ7Z4S6 1674 aa20.79■□□□□ 0.92
TROVE2-211ENST00000506303 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
TROVE2-211ENST00000506303 WIZO95785 1651 aa20.67■□□□□ 0.9
TROVE2-211ENST00000506303 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
TROVE2-211ENST00000506303 WDR62O43379 1518 aa20.58■□□□□ 0.88
TROVE2-211ENST00000506303 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
TROVE2-211ENST00000506303 RSF1Q96T23 1441 aaPredicted RBP20.48■□□□□ 0.87
TROVE2-211ENST00000506303 CHIC1Q5VXU3 224 aa20.48■□□□□ 0.87
TROVE2-211ENST00000506303 CFTRP13569 1480 aa20.48■□□□□ 0.87
TROVE2-211ENST00000506303 FANCD2Q9BXW9 1451 aa20.47■□□□□ 0.87
TROVE2-211ENST00000506303 TOP2AP11388 1531 aaKnown RBP20.42■□□□□ 0.86
TROVE2-211ENST00000506303 URB2Q14146 1524 aaKnown RBP20.32■□□□□ 0.84
TROVE2-211ENST00000506303 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
TROVE2-211ENST00000506303 PRDM2Q13029 1718 aa20.27■□□□□ 0.83
TROVE2-211ENST00000506303 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
TROVE2-211ENST00000506303 CCDC88BA6NC98 1476 aa20.19■□□□□ 0.82
TROVE2-211ENST00000506303 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
TROVE2-211ENST00000506303 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
TROVE2-211ENST00000506303 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
TROVE2-211ENST00000506303 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
TROVE2-211ENST00000506303 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
TROVE2-211ENST00000506303 RIMBP3CA6NJZ7 1639 aa19.98■□□□□ 0.79
TROVE2-211ENST00000506303 RIMBP3BA6NNM3 1639 aa19.98■□□□□ 0.79
TROVE2-211ENST00000506303 RIMBP3Q9UFD9 1639 aa19.98■□□□□ 0.79
TROVE2-211ENST00000506303 EIF4G3O43432 1585 aaKnown RBP19.95■□□□□ 0.78
TROVE2-211ENST00000506303 TARBP1Q13395 1621 aaKnown RBP19.93■□□□□ 0.78
TROVE2-211ENST00000506303 ARHGEF11O15085 1522 aa19.91■□□□□ 0.78
TROVE2-211ENST00000506303 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.772e-6■■■□□ 15.2
TROVE2-211ENST00000506303 POLA1P09884 1462 aaPredicted RBP19.86■□□□□ 0.77
TROVE2-211ENST00000506303 CHD1O14646 1710 aa19.83■□□□□ 0.77
TROVE2-211ENST00000506303 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
TROVE2-211ENST00000506303 SOGA1O94964 1423 aa19.76■□□□□ 0.75
TROVE2-211ENST00000506303 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
TROVE2-211ENST00000506303 CYB5RLQ6IPT4 315 aa19.74■□□□□ 0.75
TROVE2-211ENST00000506303 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
TROVE2-211ENST00000506303 FBLN2P98095 1184 aa19.71■□□□□ 0.75
TROVE2-211ENST00000506303 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
TROVE2-211ENST00000506303 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
TROVE2-211ENST00000506303 CUX1P39880 1505 aa19.68■□□□□ 0.74
TROVE2-211ENST00000506303 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
TROVE2-211ENST00000506303 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
TROVE2-211ENST00000506303 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
TROVE2-211ENST00000506303 GRIN2BQ13224 1484 aa19.61■□□□□ 0.73
TROVE2-211ENST00000506303 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
TROVE2-211ENST00000506303 SYNJ1O43426 1573 aa19.57■□□□□ 0.72
TROVE2-211ENST00000506303 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
TROVE2-211ENST00000506303 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
TROVE2-211ENST00000506303 GAPVD1Q14C86 1478 aa19.52■□□□□ 0.72
TROVE2-211ENST00000506303 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
TROVE2-211ENST00000506303 PBRM1Q86U86 1689 aa19.51■□□□□ 0.71
TROVE2-211ENST00000506303 ABCA5Q8WWZ7 1642 aa19.47■□□□□ 0.71
TROVE2-211ENST00000506303 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
TROVE2-211ENST00000506303 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.694e-8■■■■■ 27.9
TROVE2-211ENST00000506303 GRIN2AQ12879 1464 aa19.35■□□□□ 0.69
TROVE2-211ENST00000506303 TOP2BQ02880 1626 aa19.35■□□□□ 0.69
TROVE2-211ENST00000506303 BIVM-ERCC5R4GMW8 1640 aa19.35■□□□□ 0.69
TROVE2-211ENST00000506303 NUP160Q12769 1436 aa19.33■□□□□ 0.68
TROVE2-211ENST00000506303 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
TROVE2-211ENST00000506303 CEP170Q5SW79 1584 aa19.28■□□□□ 0.68
TROVE2-211ENST00000506303 ERCC6L2Q5T890 1561 aa19.28■□□□□ 0.68
TROVE2-211ENST00000506303 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
TROVE2-211ENST00000506303 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
TROVE2-211ENST00000506303 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
TROVE2-211ENST00000506303 PRG4Q92954 1404 aaPredicted RBP19.11■□□□□ 0.65
TROVE2-211ENST00000506303 JPH4Q96JJ6 628 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms