RNA–Protein interactions for RNA: ENST00000506289.5

APBB3-212, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 5

Gene APBB3, Length 943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-212ENST00000506289 NISCHQ9Y2I1 1504 aa43.12■■■■■ 4.49
APBB3-212ENST00000506289 CCDC180Q9P1Z9 1646 aa38.45■■■■□ 3.75
APBB3-212ENST00000506289 ABCC9O60706 1549 aa37.54■■■■□ 3.6
APBB3-212ENST00000506289 RB1CC1Q8TDY2 1594 aa36.17■■■■□ 3.38
APBB3-212ENST00000506289 NACADO15069 1562 aa36.13■■■■□ 3.37
APBB3-212ENST00000506289 MYO15BQ96JP2 1530 aa35.95■■■■□ 3.35
APBB3-212ENST00000506289 ZCCHC6Q5VYS8 1495 aaKnown RBP35.92■■■■□ 3.34
APBB3-212ENST00000506289 DCAF8L2P0C7V8 631 aa35.82■■■■□ 3.32
APBB3-212ENST00000506289 DCAF1Q9Y4B6 1507 aa35.75■■■■□ 3.31
APBB3-212ENST00000506289 UNC13AQ9UPW8 1703 aa35.41■■■■□ 3.26
APBB3-212ENST00000506289 BICRAQ9NZM4 1560 aa35.11■■■■□ 3.21
APBB3-212ENST00000506289 PABPN1Q86U42 306 aaKnown RBP eCLIP35■■■■□ 3.19
APBB3-212ENST00000506289 SCRIBQ14160 1630 aa34.95■■■■□ 3.19
APBB3-212ENST00000506289 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
APBB3-212ENST00000506289 DNAJC5BQ9UF47 199 aa34.53■■■■□ 3.12
APBB3-212ENST00000506289 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
APBB3-212ENST00000506289 CC2D2AQ9P2K1 1620 aa34.03■■■■□ 3.04
APBB3-212ENST00000506289 CECR2Q9BXF3 1484 aa33.77■■■■□ 3
APBB3-212ENST00000506289 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
APBB3-212ENST00000506289 BAZ1AQ9NRL2 1556 aaPredicted RBP33.43■■■□□ 2.94
APBB3-212ENST00000506289 NCAPD3P42695 1498 aa33.32■■■□□ 2.92
APBB3-212ENST00000506289 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
APBB3-212ENST00000506289 SMARCA2P51531 1590 aa33.28■■■□□ 2.92
APBB3-212ENST00000506289 PEG3Q9GZU2 1588 aa33.23■■■□□ 2.91
APBB3-212ENST00000506289 MROH2BQ7Z745 1585 aa33.2■■■□□ 2.91
APBB3-212ENST00000506289 HMGXB3Q12766 1538 aa33.18■■■□□ 2.9
APBB3-212ENST00000506289 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
APBB3-212ENST00000506289 WIZO95785 1651 aa32.85■■■□□ 2.85
APBB3-212ENST00000506289 RSF1Q96T23 1441 aaPredicted RBP32.78■■■□□ 2.84
APBB3-212ENST00000506289 TOP2AP11388 1531 aaKnown RBP32.51■■■□□ 2.8
APBB3-212ENST00000506289 NESP48681 1621 aa32.48■■■□□ 2.79
APBB3-212ENST00000506289 LAMC3Q9Y6N6 1575 aa32.47■■■□□ 2.79
APBB3-212ENST00000506289 ERCC6Q03468 1493 aa32.35■■■□□ 2.77
APBB3-212ENST00000506289 CADPSQ9ULU8 1353 aa32.31■■■□□ 2.76
APBB3-212ENST00000506289 PDS5BQ9NTI5 1447 aa32.19■■■□□ 2.74
APBB3-212ENST00000506289 KIF21AQ7Z4S6 1674 aa32.17■■■□□ 2.74
APBB3-212ENST00000506289 CUX2O14529 1486 aa32.14■■■□□ 2.74
APBB3-212ENST00000506289 CFTRP13569 1480 aa32.13■■■□□ 2.73
APBB3-212ENST00000506289 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
APBB3-212ENST00000506289 CCDC88BA6NC98 1476 aa32.1■■■□□ 2.73
APBB3-212ENST00000506289 PRDM2Q13029 1718 aa31.97■■■□□ 2.71
APBB3-212ENST00000506289 FANCD2Q9BXW9 1451 aa31.92■■■□□ 2.7
APBB3-212ENST00000506289 CEP164Q9UPV0 1460 aa31.9■■■□□ 2.7
APBB3-212ENST00000506289 MRC2Q9UBG0 1479 aa31.88■■■□□ 2.69
APBB3-212ENST00000506289 WDR62O43379 1518 aa31.83■■■□□ 2.69
APBB3-212ENST00000506289 SUPT5HO00267 1087 aaKnown RBP31.72■■■□□ 2.67
APBB3-212ENST00000506289 URB2Q14146 1524 aaKnown RBP31.63■■■□□ 2.65
APBB3-212ENST00000506289 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
APBB3-212ENST00000506289 TOPBP1Q92547 1522 aa31.43■■■□□ 2.62
APBB3-212ENST00000506289 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
APBB3-212ENST00000506289 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
APBB3-212ENST00000506289 DNAJC5Q9H3Z4 198 aa31.2■■■□□ 2.59
APBB3-212ENST00000506289 CUX1P39880 1505 aa31.16■■■□□ 2.58
APBB3-212ENST00000506289 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
APBB3-212ENST00000506289 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
APBB3-212ENST00000506289 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
APBB3-212ENST00000506289 FGD5Q6ZNL6 1462 aa31.05■■■□□ 2.56
APBB3-212ENST00000506289 EIF4G3O43432 1585 aaKnown RBP31.01■■■□□ 2.56
APBB3-212ENST00000506289 SOGA1O94964 1423 aa30.98■■■□□ 2.55
APBB3-212ENST00000506289 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
APBB3-212ENST00000506289 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
APBB3-212ENST00000506289 BIVM-ERCC5R4GMW8 1640 aa30.92■■■□□ 2.54
APBB3-212ENST00000506289 TOP2BQ02880 1626 aa30.91■■■□□ 2.54
APBB3-212ENST00000506289 WRNQ14191 1432 aaPredicted RBP eCLIP30.9■■■□□ 2.54
APBB3-212ENST00000506289 AQRO60306 1485 aaKnown RBP eCLIP30.88■■■□□ 2.532e-6■■■■■ 39.8
APBB3-212ENST00000506289 SYNJ1O43426 1573 aa30.86■■■□□ 2.53
APBB3-212ENST00000506289 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
APBB3-212ENST00000506289 ABCA10Q8WWZ4 1543 aa30.78■■■□□ 2.52
APBB3-212ENST00000506289 ABCA5Q8WWZ7 1642 aa30.7■■■□□ 2.51
APBB3-212ENST00000506289 OSCARQ8IYS5 282 aa30.7■■■□□ 2.51
APBB3-212ENST00000506289 GRIN2BQ13224 1484 aa30.66■■■□□ 2.5
APBB3-212ENST00000506289 PBRM1Q86U86 1689 aa30.65■■■□□ 2.5
APBB3-212ENST00000506289 CHD1O14646 1710 aa30.64■■■□□ 2.5
APBB3-212ENST00000506289 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
APBB3-212ENST00000506289 MAGI1Q96QZ7 1491 aaPredicted RBP30.62■■■□□ 2.49
APBB3-212ENST00000506289 SNAPC4Q5SXM2 1469 aa30.61■■■□□ 2.49
APBB3-212ENST00000506289 SYNJ2O15056 1496 aa30.49■■■□□ 2.47
APBB3-212ENST00000506289 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
APBB3-212ENST00000506289 FBLN2P98095 1184 aa30.42■■■□□ 2.46
APBB3-212ENST00000506289 ADAMTS12P58397 1594 aa30.39■■■□□ 2.46
APBB3-212ENST00000506289 CHMP7Q8WUX9 453 aaPredicted RBP30.38■■■□□ 2.45
APBB3-212ENST00000506289 CLASP1Q7Z460 1538 aa30.33■■■□□ 2.45
APBB3-212ENST00000506289 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
APBB3-212ENST00000506289 RIMBP3CA6NJZ7 1639 aa30.29■■■□□ 2.44
APBB3-212ENST00000506289 RIMBP3BA6NNM3 1639 aa30.29■■■□□ 2.44
APBB3-212ENST00000506289 RIMBP3Q9UFD9 1639 aa30.29■■■□□ 2.44
APBB3-212ENST00000506289 GRIN2AQ12879 1464 aa30.27■■■□□ 2.44
APBB3-212ENST00000506289 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
APBB3-212ENST00000506289 KIF27Q86VH2 1401 aa30.25■■■□□ 2.43
APBB3-212ENST00000506289 NUP160Q12769 1436 aa30.17■■■□□ 2.42
APBB3-212ENST00000506289 IGF1RP08069 1367 aa30.15■■■□□ 2.42
APBB3-212ENST00000506289 CEP170Q5SW79 1584 aa30.15■■■□□ 2.42
APBB3-212ENST00000506289 CUL7Q14999 1698 aa30.14■■■□□ 2.42
APBB3-212ENST00000506289 ARAP1Q96P48 1450 aa30.01■■■□□ 2.4
APBB3-212ENST00000506289 TRIM41Q8WV44 630 aa30.01■■■□□ 2.39
APBB3-212ENST00000506289 SHROOM2Q13796 1616 aa30■■■□□ 2.39
APBB3-212ENST00000506289 RUSC2Q8N2Y8 1516 aa29.95■■■□□ 2.38
APBB3-212ENST00000506289 CARMIL1Q5VZK9 1371 aa29.94■■■□□ 2.38
APBB3-212ENST00000506289 CYB5RLQ6IPT4 315 aa29.88■■■□□ 2.37
APBB3-212ENST00000506289 ERCC6L2Q5T890 1561 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms