RNA–Protein interactions for RNA: ENST00000506001.1

PHYKPL-213, Transcript of 5-phosphohydroxy-L-lysine phospho-lyase, humanhuman

TSL 3

Gene PHYKPL, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHYKPL-213ENST00000506001 NISCHQ9Y2I1 1504 aa47.89■■■■■ 5.26
PHYKPL-213ENST00000506001 CCDC180Q9P1Z9 1646 aa43.1■■■■■ 4.49
PHYKPL-213ENST00000506001 ABCC9O60706 1549 aa43.09■■■■■ 4.49
PHYKPL-213ENST00000506001 RB1CC1Q8TDY2 1594 aa41■■■■■ 4.15
PHYKPL-213ENST00000506001 NACADO15069 1562 aa40.69■■■■■ 4.11
PHYKPL-213ENST00000506001 DNAJC5BQ9UF47 199 aa40.54■■■■■ 4.08
PHYKPL-213ENST00000506001 DCAF8L2P0C7V8 631 aa40.25■■■■■ 4.03
PHYKPL-213ENST00000506001 UNC13AQ9UPW8 1703 aa40.24■■■■■ 4.03
PHYKPL-213ENST00000506001 MYO15BQ96JP2 1530 aa40.14■■■■■ 4.02
PHYKPL-213ENST00000506001 PABPN1Q86U42 306 aaKnown RBP eCLIP40.03■■■■■ 4
PHYKPL-213ENST00000506001 BICRAQ9NZM4 1560 aa39.89■■■■□ 3.98
PHYKPL-213ENST00000506001 ZCCHC6Q5VYS8 1495 aaKnown RBP39.69■■■■□ 3.94
PHYKPL-213ENST00000506001 DCAF1Q9Y4B6 1507 aa39.58■■■■□ 3.93
PHYKPL-213ENST00000506001 SHROOM4Q9ULL8 1493 aa39.29■■■■□ 3.88
PHYKPL-213ENST00000506001 SCRIBQ14160 1630 aa39.2■■■■□ 3.87
PHYKPL-213ENST00000506001 CC2D2AQ9P2K1 1620 aa38.99■■■■□ 3.83
PHYKPL-213ENST00000506001 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
PHYKPL-213ENST00000506001 CECR2Q9BXF3 1484 aa38.82■■■■□ 3.81
PHYKPL-213ENST00000506001 NCAPD3P42695 1498 aa37.56■■■■□ 3.6
PHYKPL-213ENST00000506001 ATAD2BQ9ULI0 1458 aa37.44■■■■□ 3.58
PHYKPL-213ENST00000506001 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
PHYKPL-213ENST00000506001 SMARCA2P51531 1590 aa37.32■■■■□ 3.56
PHYKPL-213ENST00000506001 HMGXB3Q12766 1538 aa37.31■■■■□ 3.56
PHYKPL-213ENST00000506001 DNAJC5Q9H3Z4 198 aa37.25■■■■□ 3.55
PHYKPL-213ENST00000506001 CUX2O14529 1486 aa37.2■■■■□ 3.55
PHYKPL-213ENST00000506001 BAZ1AQ9NRL2 1556 aaPredicted RBP37.17■■■■□ 3.54
PHYKPL-213ENST00000506001 ERCC6Q03468 1493 aa37.15■■■■□ 3.54
PHYKPL-213ENST00000506001 PEG3Q9GZU2 1588 aa37.08■■■■□ 3.53
PHYKPL-213ENST00000506001 BAZ1BQ9UIG0 1483 aaKnown RBP37.03■■■■□ 3.52
PHYKPL-213ENST00000506001 NESP48681 1621 aa37.02■■■■□ 3.52
PHYKPL-213ENST00000506001 MROH2BQ7Z745 1585 aa36.91■■■■□ 3.5
PHYKPL-213ENST00000506001 LAMC3Q9Y6N6 1575 aa36.76■■■■□ 3.48
PHYKPL-213ENST00000506001 THOC2Q8NI27 1593 aaKnown RBP36.74■■■■□ 3.47
PHYKPL-213ENST00000506001 KIF21AQ7Z4S6 1674 aa36.62■■■■□ 3.45
PHYKPL-213ENST00000506001 WIZO95785 1651 aa36.49■■■■□ 3.43
PHYKPL-213ENST00000506001 PDS5BQ9NTI5 1447 aa36.46■■■■□ 3.43
PHYKPL-213ENST00000506001 CADPSQ9ULU8 1353 aa36.37■■■■□ 3.41
PHYKPL-213ENST00000506001 MRC2Q9UBG0 1479 aa36.2■■■■□ 3.39
PHYKPL-213ENST00000506001 WDR62O43379 1518 aa36.18■■■■□ 3.38
PHYKPL-213ENST00000506001 RSF1Q96T23 1441 aaPredicted RBP36.07■■■■□ 3.36
PHYKPL-213ENST00000506001 CEP164Q9UPV0 1460 aa36.03■■■■□ 3.36
PHYKPL-213ENST00000506001 TOP2AP11388 1531 aaKnown RBP35.99■■■■□ 3.35
PHYKPL-213ENST00000506001 CFTRP13569 1480 aa35.98■■■■□ 3.35
PHYKPL-213ENST00000506001 FANCD2Q9BXW9 1451 aa35.98■■■■□ 3.35
PHYKPL-213ENST00000506001 PRDM2Q13029 1718 aa35.74■■■■□ 3.31
PHYKPL-213ENST00000506001 URB2Q14146 1524 aaKnown RBP35.74■■■■□ 3.31
PHYKPL-213ENST00000506001 CCDC88BA6NC98 1476 aa35.56■■■■□ 3.28
PHYKPL-213ENST00000506001 TRIM41Q8WV44 630 aa35.5■■■■□ 3.27
PHYKPL-213ENST00000506001 OSCARQ8IYS5 282 aa35.37■■■■□ 3.25
PHYKPL-213ENST00000506001 TOPBP1Q92547 1522 aa35.32■■■■□ 3.24
PHYKPL-213ENST00000506001 IFT140Q96RY7 1462 aa35.3■■■■□ 3.24
PHYKPL-213ENST00000506001 ZNF608Q9ULD9 1512 aaPredicted RBP35.3■■■■□ 3.24
PHYKPL-213ENST00000506001 DNMBPQ6XZF7 1577 aa35.19■■■■□ 3.22
PHYKPL-213ENST00000506001 ABCC8Q09428 1581 aa35.18■■■■□ 3.22
PHYKPL-213ENST00000506001 EIF4G3O43432 1585 aaKnown RBP35.15■■■■□ 3.22
PHYKPL-213ENST00000506001 RIMBP3CA6NJZ7 1639 aa35.09■■■■□ 3.21
PHYKPL-213ENST00000506001 RIMBP3BA6NNM3 1639 aa35.09■■■■□ 3.21
PHYKPL-213ENST00000506001 RIMBP3Q9UFD9 1639 aa35.09■■■■□ 3.21
PHYKPL-213ENST00000506001 TARBP1Q13395 1621 aaKnown RBP35.07■■■■□ 3.21
PHYKPL-213ENST00000506001 POLA1P09884 1462 aaPredicted RBP34.95■■■■□ 3.19
PHYKPL-213ENST00000506001 CHD1O14646 1710 aa34.93■■■■□ 3.18
PHYKPL-213ENST00000506001 ARHGEF11O15085 1522 aa34.93■■■■□ 3.18
PHYKPL-213ENST00000506001 AQRO60306 1485 aaKnown RBP eCLIP34.92■■■■□ 3.187e-7■□□□□ 9
PHYKPL-213ENST00000506001 RAD54L2Q9Y4B4 1467 aa34.8■■■■□ 3.16
PHYKPL-213ENST00000506001 SOGA1O94964 1423 aa34.72■■■■□ 3.15
PHYKPL-213ENST00000506001 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
PHYKPL-213ENST00000506001 CUX1P39880 1505 aa34.69■■■■□ 3.14
PHYKPL-213ENST00000506001 WDR97A6NE52 1622 aa34.69■■■■□ 3.14
PHYKPL-213ENST00000506001 TDRD9Q8NDG6 1382 aaKnown RBP34.66■■■■□ 3.14
PHYKPL-213ENST00000506001 ARAP1Q96P48 1450 aa34.59■■■■□ 3.13
PHYKPL-213ENST00000506001 FBLN2P98095 1184 aa34.59■■■■□ 3.13
PHYKPL-213ENST00000506001 SNAPC4Q5SXM2 1469 aa34.58■■■■□ 3.13
PHYKPL-213ENST00000506001 CYB5RLQ6IPT4 315 aa34.55■■■■□ 3.12
PHYKPL-213ENST00000506001 CLASP1Q7Z460 1538 aa34.51■■■■□ 3.12
PHYKPL-213ENST00000506001 MAGI1Q96QZ7 1491 aaPredicted RBP34.49■■■■□ 3.11
PHYKPL-213ENST00000506001 GRIN2BQ13224 1484 aa34.46■■■■□ 3.11
PHYKPL-213ENST00000506001 PBRM1Q86U86 1689 aa34.43■■■■□ 3.1
PHYKPL-213ENST00000506001 SYNJ1O43426 1573 aa34.41■■■■□ 3.1
PHYKPL-213ENST00000506001 SYNJ2O15056 1496 aa34.38■■■■□ 3.09
PHYKPL-213ENST00000506001 CHMP7Q8WUX9 453 aaPredicted RBP34.34■■■■□ 3.09
PHYKPL-213ENST00000506001 ABCA5Q8WWZ7 1642 aa34.33■■■■□ 3.09
PHYKPL-213ENST00000506001 GAPVD1Q14C86 1478 aa34.33■■■■□ 3.09
PHYKPL-213ENST00000506001 ABCA10Q8WWZ4 1543 aa34.31■■■■□ 3.08
PHYKPL-213ENST00000506001 SUPT5HO00267 1087 aaKnown RBP34.24■■■■□ 3.07
PHYKPL-213ENST00000506001 TRHP20396 242 aaPredicted RBP34.16■■■■□ 3.06
PHYKPL-213ENST00000506001 BIVM-ERCC5R4GMW8 1640 aa34.15■■■■□ 3.06
PHYKPL-213ENST00000506001 TOP2BQ02880 1626 aa34.11■■■■□ 3.05
PHYKPL-213ENST00000506001 WRNQ14191 1432 aaPredicted RBP eCLIP34.08■■■■□ 3.05
PHYKPL-213ENST00000506001 ADAMTS12P58397 1594 aa34.06■■■■□ 3.04
PHYKPL-213ENST00000506001 GRIN2AQ12879 1464 aa34.04■■■■□ 3.04
PHYKPL-213ENST00000506001 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
PHYKPL-213ENST00000506001 ERCC6L2Q5T890 1561 aa33.96■■■■□ 3.03
PHYKPL-213ENST00000506001 NUP160Q12769 1436 aa33.95■■■■□ 3.02
PHYKPL-213ENST00000506001 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
PHYKPL-213ENST00000506001 SHROOM2Q13796 1616 aa33.88■■■■□ 3.01
PHYKPL-213ENST00000506001 FHAD1B1AJZ9 1412 aa33.87■■■■□ 3.01
PHYKPL-213ENST00000506001 RUSC2Q8N2Y8 1516 aa33.6■■■□□ 2.97
PHYKPL-213ENST00000506001 PRG4Q92954 1404 aaPredicted RBP33.57■■■□□ 2.96
PHYKPL-213ENST00000506001 KIF13AQ9H1H9 1805 aa33.51■■■□□ 2.95
PHYKPL-213ENST00000506001 JPH4Q96JJ6 628 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms