RNA–Protein interactions for RNA: ENST00000505521.1

TMED9-202, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-202ENST00000505521 NISCHQ9Y2I1 1504 aa46.92■■■■■ 5.1
TMED9-202ENST00000505521 CCDC180Q9P1Z9 1646 aa42.17■■■■■ 4.34
TMED9-202ENST00000505521 ABCC9O60706 1549 aa41.93■■■■■ 4.3
TMED9-202ENST00000505521 RB1CC1Q8TDY2 1594 aa40.03■■■■■ 4
TMED9-202ENST00000505521 NACADO15069 1562 aa39.78■■■■□ 3.96
TMED9-202ENST00000505521 DCAF8L2P0C7V8 631 aa39.41■■■■□ 3.9
TMED9-202ENST00000505521 MYO15BQ96JP2 1530 aa39.28■■■■□ 3.88
TMED9-202ENST00000505521 UNC13AQ9UPW8 1703 aa39.28■■■■□ 3.88
TMED9-202ENST00000505521 DNAJC5BQ9UF47 199 aa39.23■■■■□ 3.87
TMED9-202ENST00000505521 PABPN1Q86U42 306 aaKnown RBP eCLIP38.99■■■■□ 3.83
TMED9-202ENST00000505521 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
TMED9-202ENST00000505521 BICRAQ9NZM4 1560 aa38.89■■■■□ 3.82
TMED9-202ENST00000505521 DCAF1Q9Y4B6 1507 aa38.81■■■■□ 3.8
TMED9-202ENST00000505521 SHROOM4Q9ULL8 1493 aa38.36■■■■□ 3.73
TMED9-202ENST00000505521 SCRIBQ14160 1630 aa38.34■■■■□ 3.73
TMED9-202ENST00000505521 CC2D2AQ9P2K1 1620 aa37.96■■■■□ 3.67
TMED9-202ENST00000505521 EIF4G1Q04637 1599 aaKnown RBP37.9■■■■□ 3.66
TMED9-202ENST00000505521 CECR2Q9BXF3 1484 aa37.77■■■■□ 3.64
TMED9-202ENST00000505521 NCAPD3P42695 1498 aa36.69■■■■□ 3.46
TMED9-202ENST00000505521 SMARCA4P51532 1647 aa36.63■■■■□ 3.45
TMED9-202ENST00000505521 ATAD2BQ9ULI0 1458 aa36.58■■■■□ 3.45
TMED9-202ENST00000505521 SMARCA2P51531 1590 aa36.51■■■■□ 3.44
TMED9-202ENST00000505521 HMGXB3Q12766 1538 aa36.46■■■■□ 3.43
TMED9-202ENST00000505521 BAZ1AQ9NRL2 1556 aaPredicted RBP36.43■■■■□ 3.42
TMED9-202ENST00000505521 PEG3Q9GZU2 1588 aa36.29■■■■□ 3.4
TMED9-202ENST00000505521 BAZ1BQ9UIG0 1483 aaKnown RBP36.23■■■■□ 3.39
TMED9-202ENST00000505521 ERCC6Q03468 1493 aa36.18■■■■□ 3.38
TMED9-202ENST00000505521 CUX2O14529 1486 aa36.15■■■■□ 3.38
TMED9-202ENST00000505521 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
TMED9-202ENST00000505521 NESP48681 1621 aa36.07■■■■□ 3.36
TMED9-202ENST00000505521 DNAJC5Q9H3Z4 198 aa35.97■■■■□ 3.35
TMED9-202ENST00000505521 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
TMED9-202ENST00000505521 WIZO95785 1651 aa35.77■■■■□ 3.32
TMED9-202ENST00000505521 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.32
TMED9-202ENST00000505521 KIF21AQ7Z4S6 1674 aa35.72■■■■□ 3.31
TMED9-202ENST00000505521 PDS5BQ9NTI5 1447 aa35.6■■■■□ 3.29
TMED9-202ENST00000505521 CADPSQ9ULU8 1353 aa35.54■■■■□ 3.28
TMED9-202ENST00000505521 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
TMED9-202ENST00000505521 MRC2Q9UBG0 1479 aa35.31■■■■□ 3.24
TMED9-202ENST00000505521 TOP2AP11388 1531 aaKnown RBP35.29■■■■□ 3.24
TMED9-202ENST00000505521 WDR62O43379 1518 aa35.27■■■■□ 3.24
TMED9-202ENST00000505521 CFTRP13569 1480 aa35.19■■■■□ 3.22
TMED9-202ENST00000505521 CEP164Q9UPV0 1460 aa35.19■■■■□ 3.22
TMED9-202ENST00000505521 FANCD2Q9BXW9 1451 aa35.16■■■■□ 3.22
TMED9-202ENST00000505521 PRDM2Q13029 1718 aa35.03■■■■□ 3.2
TMED9-202ENST00000505521 URB2Q14146 1524 aaKnown RBP34.88■■■■□ 3.17
TMED9-202ENST00000505521 CCDC88BA6NC98 1476 aa34.85■■■■□ 3.17
TMED9-202ENST00000505521 TOPBP1Q92547 1522 aa34.52■■■■□ 3.12
TMED9-202ENST00000505521 IFT140Q96RY7 1462 aa34.48■■■■□ 3.11
TMED9-202ENST00000505521 ABCC8Q09428 1581 aa34.46■■■■□ 3.11
TMED9-202ENST00000505521 OSCARQ8IYS5 282 aa34.44■■■■□ 3.1
TMED9-202ENST00000505521 DNMBPQ6XZF7 1577 aa34.43■■■■□ 3.1
TMED9-202ENST00000505521 ZNF608Q9ULD9 1512 aaPredicted RBP34.41■■■■□ 3.1
TMED9-202ENST00000505521 TRIM41Q8WV44 630 aa34.36■■■■□ 3.09
TMED9-202ENST00000505521 EIF4G3O43432 1585 aaKnown RBP34.29■■■■□ 3.08
TMED9-202ENST00000505521 TARBP1Q13395 1621 aaKnown RBP34.26■■■■□ 3.08
TMED9-202ENST00000505521 POLA1P09884 1462 aaPredicted RBP34.17■■■■□ 3.06
TMED9-202ENST00000505521 AQRO60306 1485 aaKnown RBP eCLIP34.09■■■■□ 3.052e-7■■■■■ 27.9
TMED9-202ENST00000505521 RIMBP3CA6NJZ7 1639 aa34.09■■■■□ 3.05
TMED9-202ENST00000505521 RIMBP3BA6NNM3 1639 aa34.09■■■■□ 3.05
TMED9-202ENST00000505521 RIMBP3Q9UFD9 1639 aa34.09■■■■□ 3.05
TMED9-202ENST00000505521 CHD1O14646 1710 aa34.08■■■■□ 3.05
TMED9-202ENST00000505521 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.04
TMED9-202ENST00000505521 SOGA1O94964 1423 aa33.97■■■■□ 3.03
TMED9-202ENST00000505521 FGD5Q6ZNL6 1462 aa33.96■■■■□ 3.03
TMED9-202ENST00000505521 CUX1P39880 1505 aa33.96■■■■□ 3.03
TMED9-202ENST00000505521 ARHGEF11O15085 1522 aa33.95■■■■□ 3.03
TMED9-202ENST00000505521 WDR97A6NE52 1622 aa33.94■■■■□ 3.02
TMED9-202ENST00000505521 TDRD9Q8NDG6 1382 aaKnown RBP33.87■■■■□ 3.01
TMED9-202ENST00000505521 SUPT5HO00267 1087 aaKnown RBP33.8■■■■□ 3
TMED9-202ENST00000505521 FBLN2P98095 1184 aa33.78■■■■□ 3
TMED9-202ENST00000505521 SNAPC4Q5SXM2 1469 aa33.76■■■■□ 3
TMED9-202ENST00000505521 MAGI1Q96QZ7 1491 aaPredicted RBP33.7■■■□□ 2.99
TMED9-202ENST00000505521 GRIN2BQ13224 1484 aa33.69■■■□□ 2.98
TMED9-202ENST00000505521 PBRM1Q86U86 1689 aa33.69■■■□□ 2.98
TMED9-202ENST00000505521 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
TMED9-202ENST00000505521 ARAP1Q96P48 1450 aa33.62■■■□□ 2.97
TMED9-202ENST00000505521 CYB5RLQ6IPT4 315 aa33.61■■■□□ 2.97
TMED9-202ENST00000505521 SYNJ1O43426 1573 aa33.6■■■□□ 2.97
TMED9-202ENST00000505521 ABCA10Q8WWZ4 1543 aa33.59■■■□□ 2.97
TMED9-202ENST00000505521 GAPVD1Q14C86 1478 aa33.59■■■□□ 2.97
TMED9-202ENST00000505521 ABCA5Q8WWZ7 1642 aa33.59■■■□□ 2.97
TMED9-202ENST00000505521 SYNJ2O15056 1496 aa33.58■■■□□ 2.97
TMED9-202ENST00000505521 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.96
TMED9-202ENST00000505521 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
TMED9-202ENST00000505521 TOP2BQ02880 1626 aa33.48■■■□□ 2.95
TMED9-202ENST00000505521 WRNQ14191 1432 aaPredicted RBP eCLIP33.44■■■□□ 2.94
TMED9-202ENST00000505521 ADAMTS12P58397 1594 aa33.31■■■□□ 2.92
TMED9-202ENST00000505521 GRIN2AQ12879 1464 aa33.28■■■□□ 2.92
TMED9-202ENST00000505521 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
TMED9-202ENST00000505521 CEP170Q5SW79 1584 aa33.18■■■□□ 2.9
TMED9-202ENST00000505521 TRHP20396 242 aaPredicted RBP33.18■■■□□ 2.9
TMED9-202ENST00000505521 NUP160Q12769 1436 aa33.17■■■□□ 2.9
TMED9-202ENST00000505521 FHAD1B1AJZ9 1412 aa33.16■■■□□ 2.9
TMED9-202ENST00000505521 ERCC6L2Q5T890 1561 aa33.09■■■□□ 2.89
TMED9-202ENST00000505521 SHROOM2Q13796 1616 aa33.08■■■□□ 2.89
TMED9-202ENST00000505521 RUSC2Q8N2Y8 1516 aa32.85■■■□□ 2.85
TMED9-202ENST00000505521 PRG4Q92954 1404 aaPredicted RBP32.79■■■□□ 2.84
TMED9-202ENST00000505521 CUL7Q14999 1698 aa32.77■■■□□ 2.84
TMED9-202ENST00000505521 JPH4Q96JJ6 628 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms