RNA–Protein interactions for RNA: ENST00000505018.1

AC016687.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC016687.3, Length 2,404 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016687.3-202ENST00000505018 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.07
AC016687.3-202ENST00000505018 CHIC1Q5VXU3 224 aa13.59□□□□□ -0.23
AC016687.3-202ENST00000505018 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
AC016687.3-202ENST00000505018 SENP3Q9H4L4 574 aaPredicted RBP12.01□□□□□ -0.49
AC016687.3-202ENST00000505018 FOXD1Q16676 465 aa11.48□□□□□ -0.57
AC016687.3-202ENST00000505018 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
AC016687.3-202ENST00000505018 PPP6R1Q9UPN7 881 aa10.97□□□□□ -0.65
AC016687.3-202ENST00000505018 ADRA2BP18089 450 aa10.86□□□□□ -0.67
AC016687.3-202ENST00000505018 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
AC016687.3-202ENST00000505018 PIAS4Q8N2W9 510 aaPredicted RBP10.67□□□□□ -0.7
AC016687.3-202ENST00000505018 MSH5O43196 834 aa10.36□□□□□ -0.75
AC016687.3-202ENST00000505018 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
AC016687.3-202ENST00000505018 POTEDQ86YR6 584 aa10.36□□□□□ -0.75
AC016687.3-202ENST00000505018 ABCC9O60706 1549 aa10.11□□□□□ -0.79
AC016687.3-202ENST00000505018 MAPK8IP2Q13387 824 aaPredicted RBP10.04□□□□□ -0.8
AC016687.3-202ENST00000505018 RB1CC1Q8TDY2 1594 aa9.81□□□□□ -0.84
AC016687.3-202ENST00000505018 NACADO15069 1562 aa9.76□□□□□ -0.85
AC016687.3-202ENST00000505018 MYO15BQ96JP2 1530 aa9.68□□□□□ -0.86
AC016687.3-202ENST00000505018 DMRT2Q9Y5R5 561 aa9.6□□□□□ -0.87
AC016687.3-202ENST00000505018 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
AC016687.3-202ENST00000505018 SHROOM4Q9ULL8 1493 aa9.56□□□□□ -0.88
AC016687.3-202ENST00000505018 DCAF1Q9Y4B6 1507 aa9.5□□□□□ -0.89
AC016687.3-202ENST00000505018 UNC13AQ9UPW8 1703 aa9.5□□□□□ -0.89
AC016687.3-202ENST00000505018 SCAF1Q9H7N4 1312 aaKnown RBP9.43□□□□□ -0.9
AC016687.3-202ENST00000505018 BICRAQ9NZM4 1560 aa9.41□□□□□ -0.9
AC016687.3-202ENST00000505018 ZCCHC6Q5VYS8 1495 aaKnown RBP9.4□□□□□ -0.9
AC016687.3-202ENST00000505018 DCAF8L1A6NGE4 600 aa9.38□□□□□ -0.91
AC016687.3-202ENST00000505018 DNAJC5BQ9UF47 199 aa9.36□□□□□ -0.91
AC016687.3-202ENST00000505018 DCAF8L2P0C7V8 631 aa9.32□□□□□ -0.92
AC016687.3-202ENST00000505018 PABPN1Q86U42 306 aaKnown RBP eCLIP9.29□□□□□ -0.92
AC016687.3-202ENST00000505018 HOXD11P31277 338 aaPredicted RBP9.25□□□□□ -0.93
AC016687.3-202ENST00000505018 CNKSR2Q8WXI2 1034 aa9.25□□□□□ -0.93
AC016687.3-202ENST00000505018 CC2D2AQ9P2K1 1620 aa9.22□□□□□ -0.93
AC016687.3-202ENST00000505018 SCRIBQ14160 1630 aa9.21□□□□□ -0.93
AC016687.3-202ENST00000505018 EIF4G1Q04637 1599 aaKnown RBP9.21□□□□□ -0.93
AC016687.3-202ENST00000505018 CECR2Q9BXF3 1484 aa9.19□□□□□ -0.94
AC016687.3-202ENST00000505018 NPM3O75607 178 aaKnown RBP9.17□□□□□ -0.94
AC016687.3-202ENST00000505018 KCNA4P22459 653 aa9.17□□□□□ -0.94
AC016687.3-202ENST00000505018 RNF216Q9NWF9 866 aaPredicted RBP9.15□□□□□ -0.94
AC016687.3-202ENST00000505018 RNF39Q9H2S5 420 aa9.05□□□□□ -0.96
AC016687.3-202ENST00000505018 CACNB1Q02641 598 aaPredicted RBP9.05□□□□□ -0.96
AC016687.3-202ENST00000505018 CUX2O14529 1486 aa8.94□□□□□ -0.98
AC016687.3-202ENST00000505018 NCBP3Q53F19 620 aaKnown RBP8.94□□□□□ -0.98
AC016687.3-202ENST00000505018 SMARCA2P51531 1590 aa8.93□□□□□ -0.98
AC016687.3-202ENST00000505018 HMGXB3Q12766 1538 aa8.93□□□□□ -0.98
AC016687.3-202ENST00000505018 NCAPD3P42695 1498 aa8.93□□□□□ -0.98
AC016687.3-202ENST00000505018 SMARCA4P51532 1647 aa8.87□□□□□ -0.99
AC016687.3-202ENST00000505018 BAZ1AQ9NRL2 1556 aaPredicted RBP8.86□□□□□ -0.99
AC016687.3-202ENST00000505018 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
AC016687.3-202ENST00000505018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.85□□□□□ -0.99
AC016687.3-202ENST00000505018 ATAD2BQ9ULI0 1458 aa8.84□□□□□ -0.99
AC016687.3-202ENST00000505018 SLC4A2P04920 1241 aa8.83□□□□□ -1
AC016687.3-202ENST00000505018 ERCC6Q03468 1493 aa8.83□□□□□ -1
AC016687.3-202ENST00000505018 DNAJC5Q9H3Z4 198 aa8.81□□□□□ -1
AC016687.3-202ENST00000505018 U3KPZ7 1027 aaPredicted RBP8.81□□□□□ -1
AC016687.3-202ENST00000505018 LAMC3Q9Y6N6 1575 aa8.8□□□□□ -1
AC016687.3-202ENST00000505018 SPINK5Q9NQ38 1064 aaPredicted RBP8.8□□□□□ -1
AC016687.3-202ENST00000505018 BAZ1BQ9UIG0 1483 aaKnown RBP8.79□□□□□ -1
AC016687.3-202ENST00000505018 C1QBPQ07021 282 aaKnown RBP8.75□□□□□ -1.01
AC016687.3-202ENST00000505018 THOC2Q8NI27 1593 aaKnown RBP8.73□□□□□ -1.01
AC016687.3-202ENST00000505018 PDS5BQ9NTI5 1447 aa8.71□□□□□ -1.02
AC016687.3-202ENST00000505018 KIF21AQ7Z4S6 1674 aa8.65□□□□□ -1.02
AC016687.3-202ENST00000505018 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
AC016687.3-202ENST00000505018 NESP48681 1621 aa8.63□□□□□ -1.03
AC016687.3-202ENST00000505018 MRC2Q9UBG0 1479 aa8.63□□□□□ -1.03
AC016687.3-202ENST00000505018 WDR62O43379 1518 aa8.62□□□□□ -1.03
AC016687.3-202ENST00000505018 CADPSQ9ULU8 1353 aa8.61□□□□□ -1.03
AC016687.3-202ENST00000505018 PRDM2Q13029 1718 aa8.59□□□□□ -1.03
AC016687.3-202ENST00000505018 CAPN15O75808 1086 aa8.58□□□□□ -1.04
AC016687.3-202ENST00000505018 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
AC016687.3-202ENST00000505018 ABCB7O75027 752 aa8.56□□□□□ -1.04
AC016687.3-202ENST00000505018 TOP2AP11388 1531 aaKnown RBP8.56□□□□□ -1.04
AC016687.3-202ENST00000505018 ZBTB22O15209 634 aa8.55□□□□□ -1.04
AC016687.3-202ENST00000505018 WIZO95785 1651 aa8.55□□□□□ -1.04
AC016687.3-202ENST00000505018 DSG3P32926 999 aa8.54□□□□□ -1.04
AC016687.3-202ENST00000505018 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
AC016687.3-202ENST00000505018 CFTRP13569 1480 aa8.53□□□□□ -1.04
AC016687.3-202ENST00000505018 FANCD2Q9BXW9 1451 aa8.51□□□□□ -1.05
AC016687.3-202ENST00000505018 ATF5Q9Y2D1 282 aaPredicted RBP8.5□□□□□ -1.05
AC016687.3-202ENST00000505018 ABCC8Q09428 1581 aa8.48□□□□□ -1.05
AC016687.3-202ENST00000505018 SLC4A1APQ9BWU0 796 aaKnown RBP8.46□□□□□ -1.05
AC016687.3-202ENST00000505018 RSF1Q96T23 1441 aaPredicted RBP8.46□□□□□ -1.06
AC016687.3-202ENST00000505018 IFT140Q96RY7 1462 aa8.43□□□□□ -1.06
AC016687.3-202ENST00000505018 WDR97A6NE52 1622 aa8.43□□□□□ -1.06
AC016687.3-202ENST00000505018 URB2Q14146 1524 aaKnown RBP8.41□□□□□ -1.06
AC016687.3-202ENST00000505018 DNMBPQ6XZF7 1577 aa8.39□□□□□ -1.07
AC016687.3-202ENST00000505018 OSCARQ8IYS5 282 aa8.38□□□□□ -1.07
AC016687.3-202ENST00000505018 TOPBP1Q92547 1522 aa8.35□□□□□ -1.07
AC016687.3-202ENST00000505018 CCDC88BA6NC98 1476 aa8.34□□□□□ -1.07
AC016687.3-202ENST00000505018 EIF4G3O43432 1585 aaKnown RBP8.33□□□□□ -1.08
AC016687.3-202ENST00000505018 RIMBP3CA6NJZ7 1639 aa8.31□□□□□ -1.08
AC016687.3-202ENST00000505018 RIMBP3BA6NNM3 1639 aa8.31□□□□□ -1.08
AC016687.3-202ENST00000505018 RIMBP3Q9UFD9 1639 aa8.31□□□□□ -1.08
AC016687.3-202ENST00000505018 POLA2Q14181 598 aa8.31□□□□□ -1.08
AC016687.3-202ENST00000505018 TARBP1Q13395 1621 aaKnown RBP8.3□□□□□ -1.08
AC016687.3-202ENST00000505018 TRIM41Q8WV44 630 aa8.29□□□□□ -1.08
AC016687.3-202ENST00000505018 ARHGEF11O15085 1522 aa8.27□□□□□ -1.09
AC016687.3-202ENST00000505018 FOXD4L1Q9NU39 408 aa8.27□□□□□ -1.09
AC016687.3-202ENST00000505018 CHD1O14646 1710 aa8.27□□□□□ -1.09
AC016687.3-202ENST00000505018 MYCNP04198 464 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms