RNA–Protein interactions for RNA: ENST00000504586.1

ABCC3-206, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-206ENST00000504586 NISCHQ9Y2I1 1504 aa36.39■■■■□ 3.42
ABCC3-206ENST00000504586 CCDC180Q9P1Z9 1646 aa32.59■■■□□ 2.81
ABCC3-206ENST00000504586 ABCC9O60706 1549 aa32.31■■■□□ 2.76
ABCC3-206ENST00000504586 RB1CC1Q8TDY2 1594 aa30.91■■■□□ 2.54
ABCC3-206ENST00000504586 NACADO15069 1562 aa30.76■■■□□ 2.52
ABCC3-206ENST00000504586 DCAF8L2P0C7V8 631 aa30.56■■■□□ 2.48
ABCC3-206ENST00000504586 MYO15BQ96JP2 1530 aa30.45■■■□□ 2.47
ABCC3-206ENST00000504586 ZCCHC6Q5VYS8 1495 aaKnown RBP30.2■■■□□ 2.43
ABCC3-206ENST00000504586 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
ABCC3-206ENST00000504586 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
ABCC3-206ENST00000504586 PABPN1Q86U42 306 aaKnown RBP eCLIP30.1■■■□□ 2.41
ABCC3-206ENST00000504586 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
ABCC3-206ENST00000504586 BICRAQ9NZM4 1560 aa29.97■■■□□ 2.39
ABCC3-206ENST00000504586 SHROOM4Q9ULL8 1493 aa29.67■■■□□ 2.34
ABCC3-206ENST00000504586 SCRIBQ14160 1630 aa29.63■■■□□ 2.33
ABCC3-206ENST00000504586 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
ABCC3-206ENST00000504586 CC2D2AQ9P2K1 1620 aa29.22■■■□□ 2.27
ABCC3-206ENST00000504586 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
ABCC3-206ENST00000504586 NCAPD3P42695 1498 aa28.39■■■□□ 2.13
ABCC3-206ENST00000504586 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
ABCC3-206ENST00000504586 ATAD2BQ9ULI0 1458 aa28.31■■■□□ 2.12
ABCC3-206ENST00000504586 SMARCA2P51531 1590 aa28.26■■■□□ 2.11
ABCC3-206ENST00000504586 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
ABCC3-206ENST00000504586 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
ABCC3-206ENST00000504586 PEG3Q9GZU2 1588 aa28.1■■■□□ 2.09
ABCC3-206ENST00000504586 BAZ1BQ9UIG0 1483 aaKnown RBP28.04■■■□□ 2.08
ABCC3-206ENST00000504586 MROH2BQ7Z745 1585 aa28.01■■■□□ 2.07
ABCC3-206ENST00000504586 ERCC6Q03468 1493 aa27.89■■■□□ 2.06
ABCC3-206ENST00000504586 CUX2O14529 1486 aa27.82■■■□□ 2.04
ABCC3-206ENST00000504586 NESP48681 1621 aa27.81■■■□□ 2.04
ABCC3-206ENST00000504586 LAMC3Q9Y6N6 1575 aa27.72■■■□□ 2.03
ABCC3-206ENST00000504586 WIZO95785 1651 aa27.68■■■□□ 2.02
ABCC3-206ENST00000504586 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
ABCC3-206ENST00000504586 DNAJC5Q9H3Z4 198 aa27.54■■■□□ 2
ABCC3-206ENST00000504586 RSF1Q96T23 1441 aaPredicted RBP27.53■■■□□ 2
ABCC3-206ENST00000504586 CADPSQ9ULU8 1353 aa27.53■■■□□ 2
ABCC3-206ENST00000504586 THOC2Q8NI27 1593 aaKnown RBP27.52■■■□□ 2
ABCC3-206ENST00000504586 KIF21AQ7Z4S6 1674 aa27.48■■□□□ 1.99
ABCC3-206ENST00000504586 TOP2AP11388 1531 aaKnown RBP27.38■■□□□ 1.97
ABCC3-206ENST00000504586 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
ABCC3-206ENST00000504586 CFTRP13569 1480 aa27.26■■□□□ 1.95
ABCC3-206ENST00000504586 CEP164Q9UPV0 1460 aa27.21■■□□□ 1.95
ABCC3-206ENST00000504586 WDR62O43379 1518 aa27.21■■□□□ 1.95
ABCC3-206ENST00000504586 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
ABCC3-206ENST00000504586 CCDC88BA6NC98 1476 aa27.06■■□□□ 1.92
ABCC3-206ENST00000504586 PRDM2Q13029 1718 aa27.02■■□□□ 1.92
ABCC3-206ENST00000504586 URB2Q14146 1524 aaKnown RBP26.95■■□□□ 1.9
ABCC3-206ENST00000504586 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
ABCC3-206ENST00000504586 TOPBP1Q92547 1522 aa26.7■■□□□ 1.87
ABCC3-206ENST00000504586 IFT140Q96RY7 1462 aa26.68■■□□□ 1.86
ABCC3-206ENST00000504586 DNMBPQ6XZF7 1577 aa26.63■■□□□ 1.85
ABCC3-206ENST00000504586 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
ABCC3-206ENST00000504586 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
ABCC3-206ENST00000504586 TARBP1Q13395 1621 aaKnown RBP26.46■■□□□ 1.83
ABCC3-206ENST00000504586 EIF4G3O43432 1585 aaKnown RBP26.45■■□□□ 1.82
ABCC3-206ENST00000504586 POLA1P09884 1462 aaPredicted RBP26.44■■□□□ 1.82
ABCC3-206ENST00000504586 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
ABCC3-206ENST00000504586 TRIM41Q8WV44 630 aa26.36■■□□□ 1.81
ABCC3-206ENST00000504586 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.81
ABCC3-206ENST00000504586 SOGA1O94964 1423 aa26.34■■□□□ 1.81
ABCC3-206ENST00000504586 RAD54L2Q9Y4B4 1467 aa26.31■■□□□ 1.8
ABCC3-206ENST00000504586 CUX1P39880 1505 aa26.31■■□□□ 1.8
ABCC3-206ENST00000504586 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
ABCC3-206ENST00000504586 WDR97A6NE52 1622 aa26.26■■□□□ 1.79
ABCC3-206ENST00000504586 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
ABCC3-206ENST00000504586 CHD1O14646 1710 aa26.2■■□□□ 1.79
ABCC3-206ENST00000504586 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
ABCC3-206ENST00000504586 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
ABCC3-206ENST00000504586 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
ABCC3-206ENST00000504586 FBLN2P98095 1184 aa26.13■■□□□ 1.77
ABCC3-206ENST00000504586 ARHGEF11O15085 1522 aa26.12■■□□□ 1.77
ABCC3-206ENST00000504586 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
ABCC3-206ENST00000504586 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
ABCC3-206ENST00000504586 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
ABCC3-206ENST00000504586 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
ABCC3-206ENST00000504586 GAPVD1Q14C86 1478 aa26.02■■□□□ 1.76
ABCC3-206ENST00000504586 CHMP7Q8WUX9 453 aaPredicted RBP26.01■■□□□ 1.75
ABCC3-206ENST00000504586 PBRM1Q86U86 1689 aa25.99■■□□□ 1.75
ABCC3-206ENST00000504586 WRNQ14191 1432 aaPredicted RBP eCLIP25.98■■□□□ 1.75
ABCC3-206ENST00000504586 BIVM-ERCC5R4GMW8 1640 aa25.98■■□□□ 1.75
ABCC3-206ENST00000504586 SYNJ2O15056 1496 aa25.98■■□□□ 1.75
ABCC3-206ENST00000504586 TOP2BQ02880 1626 aa25.97■■□□□ 1.75
ABCC3-206ENST00000504586 ABCA5Q8WWZ7 1642 aa25.97■■□□□ 1.75
ABCC3-206ENST00000504586 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
ABCC3-206ENST00000504586 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
ABCC3-206ENST00000504586 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
ABCC3-206ENST00000504586 ARAP1Q96P48 1450 aa25.86■■□□□ 1.73
ABCC3-206ENST00000504586 ADAMTS12P58397 1594 aa25.75■■□□□ 1.71
ABCC3-206ENST00000504586 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
ABCC3-206ENST00000504586 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
ABCC3-206ENST00000504586 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
ABCC3-206ENST00000504586 NUP160Q12769 1436 aa25.66■■□□□ 1.7
ABCC3-206ENST00000504586 CEP170Q5SW79 1584 aa25.63■■□□□ 1.69
ABCC3-206ENST00000504586 TRHP20396 242 aaPredicted RBP25.55■■□□□ 1.68
ABCC3-206ENST00000504586 SHROOM2Q13796 1616 aa25.52■■□□□ 1.68
ABCC3-206ENST00000504586 ERCC6L2Q5T890 1561 aa25.49■■□□□ 1.67
ABCC3-206ENST00000504586 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
ABCC3-206ENST00000504586 IGF1RP08069 1367 aa25.44■■□□□ 1.66
ABCC3-206ENST00000504586 CUL7Q14999 1698 aa25.4■■□□□ 1.66
ABCC3-206ENST00000504586 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms