RNA–Protein interactions for RNA: ENST00000504424.1

GNPDA1-206, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

TSL 4

Gene GNPDA1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-206ENST00000504424 NISCHQ9Y2I1 1504 aa41.6■■■■■ 4.25
GNPDA1-206ENST00000504424 ABCC9O60706 1549 aa37.38■■■■□ 3.57
GNPDA1-206ENST00000504424 CCDC180Q9P1Z9 1646 aa37.35■■■■□ 3.57
GNPDA1-206ENST00000504424 RB1CC1Q8TDY2 1594 aa35.51■■■■□ 3.28
GNPDA1-206ENST00000504424 NACADO15069 1562 aa35.26■■■■□ 3.24
GNPDA1-206ENST00000504424 DNAJC5BQ9UF47 199 aa35.06■■■■□ 3.2
GNPDA1-206ENST00000504424 DCAF8L2P0C7V8 631 aa34.95■■■■□ 3.19
GNPDA1-206ENST00000504424 UNC13AQ9UPW8 1703 aa34.81■■■■□ 3.16
GNPDA1-206ENST00000504424 MYO15BQ96JP2 1530 aa34.77■■■■□ 3.16
GNPDA1-206ENST00000504424 PABPN1Q86U42 306 aaKnown RBP eCLIP34.75■■■■□ 3.15
GNPDA1-206ENST00000504424 BICRAQ9NZM4 1560 aa34.59■■■■□ 3.13
GNPDA1-206ENST00000504424 ZCCHC6Q5VYS8 1495 aaKnown RBP34.54■■■■□ 3.12
GNPDA1-206ENST00000504424 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
GNPDA1-206ENST00000504424 SCRIBQ14160 1630 aa34.1■■■■□ 3.05
GNPDA1-206ENST00000504424 SHROOM4Q9ULL8 1493 aa34.02■■■■□ 3.04
GNPDA1-206ENST00000504424 CC2D2AQ9P2K1 1620 aa33.77■■■■□ 3
GNPDA1-206ENST00000504424 EIF4G1Q04637 1599 aaKnown RBP33.7■■■□□ 2.99
GNPDA1-206ENST00000504424 CECR2Q9BXF3 1484 aa33.65■■■□□ 2.98
GNPDA1-206ENST00000504424 NCAPD3P42695 1498 aa32.55■■■□□ 2.8
GNPDA1-206ENST00000504424 ATAD2BQ9ULI0 1458 aa32.5■■■□□ 2.79
GNPDA1-206ENST00000504424 SMARCA4P51532 1647 aa32.5■■■□□ 2.79
GNPDA1-206ENST00000504424 HMGXB3Q12766 1538 aa32.37■■■□□ 2.77
GNPDA1-206ENST00000504424 SMARCA2P51531 1590 aa32.36■■■□□ 2.77
GNPDA1-206ENST00000504424 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
GNPDA1-206ENST00000504424 ERCC6Q03468 1493 aa32.22■■■□□ 2.75
GNPDA1-206ENST00000504424 CUX2O14529 1486 aa32.17■■■□□ 2.74
GNPDA1-206ENST00000504424 BAZ1BQ9UIG0 1483 aaKnown RBP32.16■■■□□ 2.74
GNPDA1-206ENST00000504424 PEG3Q9GZU2 1588 aa32.15■■■□□ 2.74
GNPDA1-206ENST00000504424 NESP48681 1621 aa32.15■■■□□ 2.74
GNPDA1-206ENST00000504424 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
GNPDA1-206ENST00000504424 DNAJC5Q9H3Z4 198 aa32.09■■■□□ 2.73
GNPDA1-206ENST00000504424 THOC2Q8NI27 1593 aaKnown RBP31.86■■■□□ 2.69
GNPDA1-206ENST00000504424 LAMC3Q9Y6N6 1575 aa31.83■■■□□ 2.69
GNPDA1-206ENST00000504424 KIF21AQ7Z4S6 1674 aa31.73■■■□□ 2.67
GNPDA1-206ENST00000504424 WIZO95785 1651 aa31.71■■■□□ 2.67
GNPDA1-206ENST00000504424 PDS5BQ9NTI5 1447 aa31.59■■■□□ 2.65
GNPDA1-206ENST00000504424 CADPSQ9ULU8 1353 aa31.55■■■□□ 2.64
GNPDA1-206ENST00000504424 MRC2Q9UBG0 1479 aa31.41■■■□□ 2.62
GNPDA1-206ENST00000504424 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
GNPDA1-206ENST00000504424 WDR62O43379 1518 aa31.37■■■□□ 2.61
GNPDA1-206ENST00000504424 TOP2AP11388 1531 aaKnown RBP31.3■■■□□ 2.6
GNPDA1-206ENST00000504424 CEP164Q9UPV0 1460 aa31.27■■■□□ 2.6
GNPDA1-206ENST00000504424 FANCD2Q9BXW9 1451 aa31.24■■■□□ 2.59
GNPDA1-206ENST00000504424 CFTRP13569 1480 aa31.23■■■□□ 2.59
GNPDA1-206ENST00000504424 URB2Q14146 1524 aaKnown RBP31.04■■■□□ 2.56
GNPDA1-206ENST00000504424 PRDM2Q13029 1718 aa30.94■■■□□ 2.54
GNPDA1-206ENST00000504424 CCDC88BA6NC98 1476 aa30.91■■■□□ 2.54
GNPDA1-206ENST00000504424 TRIM41Q8WV44 630 aa30.71■■■□□ 2.51
GNPDA1-206ENST00000504424 TOPBP1Q92547 1522 aa30.67■■■□□ 2.5
GNPDA1-206ENST00000504424 ZNF608Q9ULD9 1512 aaPredicted RBP30.67■■■□□ 2.5
GNPDA1-206ENST00000504424 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
GNPDA1-206ENST00000504424 OSCARQ8IYS5 282 aa30.56■■■□□ 2.48
GNPDA1-206ENST00000504424 DNMBPQ6XZF7 1577 aa30.56■■■□□ 2.48
GNPDA1-206ENST00000504424 EIF4G3O43432 1585 aaKnown RBP30.51■■■□□ 2.47
GNPDA1-206ENST00000504424 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
GNPDA1-206ENST00000504424 TARBP1Q13395 1621 aaKnown RBP30.42■■■□□ 2.46
GNPDA1-206ENST00000504424 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
GNPDA1-206ENST00000504424 RIMBP3CA6NJZ7 1639 aa30.36■■■□□ 2.45
GNPDA1-206ENST00000504424 RIMBP3BA6NNM3 1639 aa30.36■■■□□ 2.45
GNPDA1-206ENST00000504424 RIMBP3Q9UFD9 1639 aa30.36■■■□□ 2.45
GNPDA1-206ENST00000504424 AQRO60306 1485 aaKnown RBP eCLIP30.32■■■□□ 2.44
GNPDA1-206ENST00000504424 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
GNPDA1-206ENST00000504424 RAD54L2Q9Y4B4 1467 aa30.26■■■□□ 2.44
GNPDA1-206ENST00000504424 CHD1O14646 1710 aa30.26■■■□□ 2.43
GNPDA1-206ENST00000504424 FGD5Q6ZNL6 1462 aa30.18■■■□□ 2.42
GNPDA1-206ENST00000504424 CUX1P39880 1505 aa30.17■■■□□ 2.42
GNPDA1-206ENST00000504424 SOGA1O94964 1423 aa30.13■■■□□ 2.41
GNPDA1-206ENST00000504424 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
GNPDA1-206ENST00000504424 SNAPC4Q5SXM2 1469 aa30.06■■■□□ 2.4
GNPDA1-206ENST00000504424 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
GNPDA1-206ENST00000504424 FBLN2P98095 1184 aa30.02■■■□□ 2.4
GNPDA1-206ENST00000504424 ARAP1Q96P48 1450 aa30.01■■■□□ 2.4
GNPDA1-206ENST00000504424 CLASP1Q7Z460 1538 aa29.94■■■□□ 2.38
GNPDA1-206ENST00000504424 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
GNPDA1-206ENST00000504424 GRIN2BQ13224 1484 aa29.91■■■□□ 2.38
GNPDA1-206ENST00000504424 CYB5RLQ6IPT4 315 aa29.9■■■□□ 2.38
GNPDA1-206ENST00000504424 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
GNPDA1-206ENST00000504424 PBRM1Q86U86 1689 aa29.86■■■□□ 2.37
GNPDA1-206ENST00000504424 SYNJ1O43426 1573 aa29.83■■■□□ 2.37
GNPDA1-206ENST00000504424 ABCA5Q8WWZ7 1642 aa29.82■■■□□ 2.36
GNPDA1-206ENST00000504424 SYNJ2O15056 1496 aa29.82■■■□□ 2.36
GNPDA1-206ENST00000504424 ABCA10Q8WWZ4 1543 aa29.81■■■□□ 2.36
GNPDA1-206ENST00000504424 GAPVD1Q14C86 1478 aa29.8■■■□□ 2.36
GNPDA1-206ENST00000504424 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
GNPDA1-206ENST00000504424 BIVM-ERCC5R4GMW8 1640 aa29.66■■■□□ 2.34
GNPDA1-206ENST00000504424 TOP2BQ02880 1626 aa29.64■■■□□ 2.34
GNPDA1-206ENST00000504424 ADAMTS12P58397 1594 aa29.62■■■□□ 2.33
GNPDA1-206ENST00000504424 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
GNPDA1-206ENST00000504424 GRIN2AQ12879 1464 aa29.56■■■□□ 2.32
GNPDA1-206ENST00000504424 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
GNPDA1-206ENST00000504424 CEP170Q5SW79 1584 aa29.52■■■□□ 2.32
GNPDA1-206ENST00000504424 ERCC6L2Q5T890 1561 aa29.51■■■□□ 2.31
GNPDA1-206ENST00000504424 NUP160Q12769 1436 aa29.47■■■□□ 2.31
GNPDA1-206ENST00000504424 FHAD1B1AJZ9 1412 aa29.42■■■□□ 2.3
GNPDA1-206ENST00000504424 ERICH3Q5RHP9 1530 aa29.41■■■□□ 2.3
GNPDA1-206ENST00000504424 SHROOM2Q13796 1616 aa29.37■■■□□ 2.29
GNPDA1-206ENST00000504424 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.27
GNPDA1-206ENST00000504424 PRG4Q92954 1404 aaPredicted RBP29.14■■■□□ 2.26
GNPDA1-206ENST00000504424 JPH4Q96JJ6 628 aa29.03■■■□□ 2.24
GNPDA1-206ENST00000504424 IGF1RP08069 1367 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms