RNA–Protein interactions for RNA: ENST00000504197.5

H2AFY-206, Transcript of H2A histone family member Y, humanhuman

TSL 2

Gene H2AFY, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-206ENST00000504197 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
H2AFY-206ENST00000504197 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
H2AFY-206ENST00000504197 ABCC9O60706 1549 aa26.79■■□□□ 1.88
H2AFY-206ENST00000504197 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
H2AFY-206ENST00000504197 NACADO15069 1562 aa25.55■■□□□ 1.68
H2AFY-206ENST00000504197 DCAF8L2P0C7V8 631 aa25.42■■□□□ 1.66
H2AFY-206ENST00000504197 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
H2AFY-206ENST00000504197 ZCCHC6Q5VYS8 1495 aaKnown RBP25.26■■□□□ 1.63
H2AFY-206ENST00000504197 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
H2AFY-206ENST00000504197 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
H2AFY-206ENST00000504197 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
H2AFY-206ENST00000504197 BICRAQ9NZM4 1560 aa24.94■■□□□ 1.58
H2AFY-206ENST00000504197 DNAJC5BQ9UF47 199 aa24.89■■□□□ 1.58
H2AFY-206ENST00000504197 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
H2AFY-206ENST00000504197 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.52
H2AFY-206ENST00000504197 EIF4G1Q04637 1599 aaKnown RBP24.26■■□□□ 1.47
H2AFY-206ENST00000504197 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
H2AFY-206ENST00000504197 CECR2Q9BXF3 1484 aa24.09■■□□□ 1.45
H2AFY-206ENST00000504197 SMARCA4P51532 1647 aa23.64■■□□□ 1.38
H2AFY-206ENST00000504197 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
H2AFY-206ENST00000504197 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
H2AFY-206ENST00000504197 BAZ1AQ9NRL2 1556 aaPredicted RBP23.54■■□□□ 1.36
H2AFY-206ENST00000504197 SMARCA2P51531 1590 aa23.49■■□□□ 1.35
H2AFY-206ENST00000504197 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
H2AFY-206ENST00000504197 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
H2AFY-206ENST00000504197 PEG3Q9GZU2 1588 aa23.42■■□□□ 1.34
H2AFY-206ENST00000504197 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.33
H2AFY-206ENST00000504197 WIZO95785 1651 aa23.17■■□□□ 1.3
H2AFY-206ENST00000504197 NESP48681 1621 aa23.14■■□□□ 1.29
H2AFY-206ENST00000504197 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
H2AFY-206ENST00000504197 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
H2AFY-206ENST00000504197 LAMC3Q9Y6N6 1575 aa23■■□□□ 1.27
H2AFY-206ENST00000504197 CUX2O14529 1486 aa22.94■■□□□ 1.26
H2AFY-206ENST00000504197 CADPSQ9ULU8 1353 aa22.88■■□□□ 1.25
H2AFY-206ENST00000504197 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
H2AFY-206ENST00000504197 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
H2AFY-206ENST00000504197 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
H2AFY-206ENST00000504197 PDS5BQ9NTI5 1447 aa22.82■■□□□ 1.24
H2AFY-206ENST00000504197 CFTRP13569 1480 aa22.7■■□□□ 1.22
H2AFY-206ENST00000504197 MRC2Q9UBG0 1479 aa22.63■■□□□ 1.21
H2AFY-206ENST00000504197 CCDC88BA6NC98 1476 aa22.62■■□□□ 1.21
H2AFY-206ENST00000504197 FANCD2Q9BXW9 1451 aa22.61■■□□□ 1.21
H2AFY-206ENST00000504197 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
H2AFY-206ENST00000504197 WDR62O43379 1518 aa22.59■■□□□ 1.21
H2AFY-206ENST00000504197 DNAJC5Q9H3Z4 198 aa22.57■■□□□ 1.2
H2AFY-206ENST00000504197 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
H2AFY-206ENST00000504197 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
H2AFY-206ENST00000504197 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
H2AFY-206ENST00000504197 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
H2AFY-206ENST00000504197 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
H2AFY-206ENST00000504197 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
H2AFY-206ENST00000504197 IFT140Q96RY7 1462 aa22.14■■□□□ 1.13
H2AFY-206ENST00000504197 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
H2AFY-206ENST00000504197 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
H2AFY-206ENST00000504197 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
H2AFY-206ENST00000504197 CUX1P39880 1505 aa22■■□□□ 1.11
H2AFY-206ENST00000504197 EIF4G3O43432 1585 aaKnown RBP21.99■■□□□ 1.11
H2AFY-206ENST00000504197 RAD54L2Q9Y4B4 1467 aa21.95■■□□□ 1.1
H2AFY-206ENST00000504197 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
H2AFY-206ENST00000504197 AQRO60306 1485 aaKnown RBP eCLIP21.93■■□□□ 1.12e-6■■■□□ 15.6
H2AFY-206ENST00000504197 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
H2AFY-206ENST00000504197 SOGA1O94964 1423 aa21.91■■□□□ 1.1
H2AFY-206ENST00000504197 TDRD9Q8NDG6 1382 aaKnown RBP21.84■■□□□ 1.09
H2AFY-206ENST00000504197 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
H2AFY-206ENST00000504197 CHD1O14646 1710 aa21.79■■□□□ 1.08
H2AFY-206ENST00000504197 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
H2AFY-206ENST00000504197 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
H2AFY-206ENST00000504197 TOP2BQ02880 1626 aa21.72■■□□□ 1.07
H2AFY-206ENST00000504197 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
H2AFY-206ENST00000504197 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
H2AFY-206ENST00000504197 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
H2AFY-206ENST00000504197 GRIN2BQ13224 1484 aa21.69■■□□□ 1.06
H2AFY-206ENST00000504197 ABCA5Q8WWZ7 1642 aa21.67■■□□□ 1.06
H2AFY-206ENST00000504197 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
H2AFY-206ENST00000504197 PBRM1Q86U86 1689 aa21.66■■□□□ 1.06
H2AFY-206ENST00000504197 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
H2AFY-206ENST00000504197 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
H2AFY-206ENST00000504197 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
H2AFY-206ENST00000504197 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
H2AFY-206ENST00000504197 MAGI1Q96QZ7 1491 aaPredicted RBP21.66■■□□□ 1.06
H2AFY-206ENST00000504197 FBLN2P98095 1184 aa21.66■■□□□ 1.06
H2AFY-206ENST00000504197 ARHGEF11O15085 1522 aa21.61■■□□□ 1.05
H2AFY-206ENST00000504197 SYNJ2O15056 1496 aa21.58■■□□□ 1.05
H2AFY-206ENST00000504197 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
H2AFY-206ENST00000504197 CLASP1Q7Z460 1538 aa21.54■■□□□ 1.04
H2AFY-206ENST00000504197 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
H2AFY-206ENST00000504197 ARAP1Q96P48 1450 aa21.44■■□□□ 1.02
H2AFY-206ENST00000504197 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
H2AFY-206ENST00000504197 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
H2AFY-206ENST00000504197 CYB5RLQ6IPT4 315 aa21.4■■□□□ 1.02
H2AFY-206ENST00000504197 FHAD1B1AJZ9 1412 aa21.39■■□□□ 1.02
H2AFY-206ENST00000504197 NUP160Q12769 1436 aa21.36■■□□□ 1.01
H2AFY-206ENST00000504197 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
H2AFY-206ENST00000504197 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
H2AFY-206ENST00000504197 IGF1RP08069 1367 aa21.25■□□□□ 0.99
H2AFY-206ENST00000504197 ERCC6L2Q5T890 1561 aa21.25■□□□□ 0.99
H2AFY-206ENST00000504197 SHROOM2Q13796 1616 aa21.24■□□□□ 0.99
H2AFY-206ENST00000504197 CUL7Q14999 1698 aa21.18■□□□□ 0.98
H2AFY-206ENST00000504197 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
H2AFY-206ENST00000504197 JPH4Q96JJ6 628 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms