RNA–Protein interactions for RNA: ENST00000504174.5

SSBP2-203, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-203ENST00000504174 NISCHQ9Y2I1 1504 aa57.59■■■■■ 6.81
SSBP2-203ENST00000504174 CCDC180Q9P1Z9 1646 aa51.76■■■■■ 5.88
SSBP2-203ENST00000504174 ABCC9O60706 1549 aa51.72■■■■■ 5.87
SSBP2-203ENST00000504174 RB1CC1Q8TDY2 1594 aa49.29■■■■■ 5.48
SSBP2-203ENST00000504174 NACADO15069 1562 aa48.93■■■■■ 5.42
SSBP2-203ENST00000504174 DCAF8L2P0C7V8 631 aa48.68■■■■■ 5.38
SSBP2-203ENST00000504174 DNAJC5BQ9UF47 199 aa48.45■■■■■ 5.35
SSBP2-203ENST00000504174 MYO15BQ96JP2 1530 aa48.22■■■■■ 5.31
SSBP2-203ENST00000504174 UNC13AQ9UPW8 1703 aa48.13■■■■■ 5.3
SSBP2-203ENST00000504174 PABPN1Q86U42 306 aaKnown RBP eCLIP48.13■■■■■ 5.3
SSBP2-203ENST00000504174 BICRAQ9NZM4 1560 aa47.75■■■■■ 5.24
SSBP2-203ENST00000504174 ZCCHC6Q5VYS8 1495 aaKnown RBP47.72■■■■■ 5.23
SSBP2-203ENST00000504174 DCAF1Q9Y4B6 1507 aa47.59■■■■■ 5.21
SSBP2-203ENST00000504174 SHROOM4Q9ULL8 1493 aa47.21■■■■■ 5.15
SSBP2-203ENST00000504174 SCRIBQ14160 1630 aa47.12■■■■■ 5.13
SSBP2-203ENST00000504174 CC2D2AQ9P2K1 1620 aa46.74■■■■■ 5.07
SSBP2-203ENST00000504174 EIF4G1Q04637 1599 aaKnown RBP46.63■■■■■ 5.06
SSBP2-203ENST00000504174 CECR2Q9BXF3 1484 aa46.61■■■■■ 5.05
SSBP2-203ENST00000504174 NCAPD3P42695 1498 aa45.13■■■■■ 4.82
SSBP2-203ENST00000504174 ATAD2BQ9ULI0 1458 aa44.98■■■■■ 4.79
SSBP2-203ENST00000504174 SMARCA4P51532 1647 aa44.95■■■■■ 4.79
SSBP2-203ENST00000504174 SMARCA2P51531 1590 aa44.9■■■■■ 4.78
SSBP2-203ENST00000504174 HMGXB3Q12766 1538 aa44.82■■■■■ 4.77
SSBP2-203ENST00000504174 BAZ1AQ9NRL2 1556 aaPredicted RBP44.75■■■■■ 4.75
SSBP2-203ENST00000504174 ERCC6Q03468 1493 aa44.72■■■■■ 4.75
SSBP2-203ENST00000504174 CUX2O14529 1486 aa44.64■■■■■ 4.74
SSBP2-203ENST00000504174 DNAJC5Q9H3Z4 198 aa44.6■■■■■ 4.73
SSBP2-203ENST00000504174 BAZ1BQ9UIG0 1483 aaKnown RBP44.59■■■■■ 4.73
SSBP2-203ENST00000504174 PEG3Q9GZU2 1588 aa44.51■■■■■ 4.72
SSBP2-203ENST00000504174 NESP48681 1621 aa44.39■■■■■ 4.7
SSBP2-203ENST00000504174 MROH2BQ7Z745 1585 aa44.35■■■■■ 4.69
SSBP2-203ENST00000504174 LAMC3Q9Y6N6 1575 aa44.17■■■■■ 4.66
SSBP2-203ENST00000504174 THOC2Q8NI27 1593 aaKnown RBP43.98■■■■■ 4.63
SSBP2-203ENST00000504174 PDS5BQ9NTI5 1447 aa43.91■■■■■ 4.62
SSBP2-203ENST00000504174 KIF21AQ7Z4S6 1674 aa43.88■■■■■ 4.61
SSBP2-203ENST00000504174 WIZO95785 1651 aa43.84■■■■■ 4.61
SSBP2-203ENST00000504174 CADPSQ9ULU8 1353 aa43.77■■■■■ 4.6
SSBP2-203ENST00000504174 MRC2Q9UBG0 1479 aa43.51■■■■■ 4.56
SSBP2-203ENST00000504174 RSF1Q96T23 1441 aaPredicted RBP43.42■■■■■ 4.54
SSBP2-203ENST00000504174 WDR62O43379 1518 aa43.39■■■■■ 4.54
SSBP2-203ENST00000504174 CEP164Q9UPV0 1460 aa43.35■■■■■ 4.53
SSBP2-203ENST00000504174 TOP2AP11388 1531 aaKnown RBP43.31■■■■■ 4.52
SSBP2-203ENST00000504174 FANCD2Q9BXW9 1451 aa43.27■■■■■ 4.52
SSBP2-203ENST00000504174 CFTRP13569 1480 aa43.25■■■■■ 4.51
SSBP2-203ENST00000504174 PRDM2Q13029 1718 aa42.9■■■■■ 4.46
SSBP2-203ENST00000504174 URB2Q14146 1524 aaKnown RBP42.88■■■■■ 4.46
SSBP2-203ENST00000504174 CCDC88BA6NC98 1476 aa42.79■■■■■ 4.44
SSBP2-203ENST00000504174 TRIM41Q8WV44 630 aa42.67■■■■■ 4.42
SSBP2-203ENST00000504174 OSCARQ8IYS5 282 aa42.6■■■■■ 4.41
SSBP2-203ENST00000504174 IFT140Q96RY7 1462 aa42.49■■■■■ 4.39
SSBP2-203ENST00000504174 TOPBP1Q92547 1522 aa42.44■■■■■ 4.38
SSBP2-203ENST00000504174 ABCC8Q09428 1581 aa42.42■■■■■ 4.38
SSBP2-203ENST00000504174 ZNF608Q9ULD9 1512 aaPredicted RBP42.35■■■■■ 4.37
SSBP2-203ENST00000504174 DNMBPQ6XZF7 1577 aa42.31■■■■■ 4.36
SSBP2-203ENST00000504174 EIF4G3O43432 1585 aaKnown RBP42.17■■■■■ 4.34
SSBP2-203ENST00000504174 TARBP1Q13395 1621 aaKnown RBP42.06■■■■■ 4.32
SSBP2-203ENST00000504174 RIMBP3CA6NJZ7 1639 aa42.03■■■■■ 4.32
SSBP2-203ENST00000504174 RIMBP3BA6NNM3 1639 aa42.03■■■■■ 4.32
SSBP2-203ENST00000504174 RIMBP3Q9UFD9 1639 aa42.03■■■■■ 4.32
SSBP2-203ENST00000504174 POLA1P09884 1462 aaPredicted RBP41.99■■■■■ 4.31
SSBP2-203ENST00000504174 AQRO60306 1485 aaKnown RBP eCLIP41.98■■■■■ 4.31
SSBP2-203ENST00000504174 CHD1O14646 1710 aa41.88■■■■■ 4.29
SSBP2-203ENST00000504174 ARHGEF11O15085 1522 aa41.88■■■■■ 4.29
SSBP2-203ENST00000504174 SOGA1O94964 1423 aa41.84■■■■■ 4.29
SSBP2-203ENST00000504174 RAD54L2Q9Y4B4 1467 aa41.83■■■■■ 4.29
SSBP2-203ENST00000504174 FBLN2P98095 1184 aa41.78■■■■■ 4.28
SSBP2-203ENST00000504174 FGD5Q6ZNL6 1462 aa41.74■■■■■ 4.27
SSBP2-203ENST00000504174 TDRD9Q8NDG6 1382 aaKnown RBP41.73■■■■■ 4.27
SSBP2-203ENST00000504174 WDR97A6NE52 1622 aa41.71■■■■■ 4.27
SSBP2-203ENST00000504174 CUX1P39880 1505 aa41.67■■■■■ 4.26
SSBP2-203ENST00000504174 CYB5RLQ6IPT4 315 aa41.58■■■■■ 4.25
SSBP2-203ENST00000504174 SNAPC4Q5SXM2 1469 aa41.58■■■■■ 4.25
SSBP2-203ENST00000504174 SUPT5HO00267 1087 aaKnown RBP41.52■■■■■ 4.24
SSBP2-203ENST00000504174 MAGI1Q96QZ7 1491 aaPredicted RBP41.5■■■■■ 4.23
SSBP2-203ENST00000504174 GRIN2BQ13224 1484 aa41.48■■■■■ 4.23
SSBP2-203ENST00000504174 CHMP7Q8WUX9 453 aaPredicted RBP41.47■■■■■ 4.23
SSBP2-203ENST00000504174 ARAP1Q96P48 1450 aa41.44■■■■■ 4.22
SSBP2-203ENST00000504174 SYNJ1O43426 1573 aa41.4■■■■■ 4.22
SSBP2-203ENST00000504174 CLASP1Q7Z460 1538 aa41.36■■■■■ 4.21
SSBP2-203ENST00000504174 SYNJ2O15056 1496 aa41.35■■■■■ 4.21
SSBP2-203ENST00000504174 PBRM1Q86U86 1689 aa41.34■■■■■ 4.21
SSBP2-203ENST00000504174 GAPVD1Q14C86 1478 aa41.33■■■■■ 4.21
SSBP2-203ENST00000504174 ABCA10Q8WWZ4 1543 aa41.28■■■■■ 4.2
SSBP2-203ENST00000504174 ABCA5Q8WWZ7 1642 aa41.22■■■■■ 4.19
SSBP2-203ENST00000504174 TRHP20396 242 aaPredicted RBP41.18■■■■■ 4.18
SSBP2-203ENST00000504174 WRNQ14191 1432 aaPredicted RBP eCLIP41.13■■■■■ 4.17
SSBP2-203ENST00000504174 BIVM-ERCC5R4GMW8 1640 aa41.06■■■■■ 4.16
SSBP2-203ENST00000504174 TOP2BQ02880 1626 aa41.05■■■■■ 4.16
SSBP2-203ENST00000504174 GRIN2AQ12879 1464 aa40.94■■■■■ 4.14
SSBP2-203ENST00000504174 ADAMTS12P58397 1594 aa40.91■■■■■ 4.14
SSBP2-203ENST00000504174 FHAD1B1AJZ9 1412 aa40.81■■■■■ 4.12
SSBP2-203ENST00000504174 ERICH3Q5RHP9 1530 aa40.78■■■■■ 4.12
SSBP2-203ENST00000504174 CEP170Q5SW79 1584 aa40.78■■■■■ 4.12
SSBP2-203ENST00000504174 NUP160Q12769 1436 aa40.77■■■■■ 4.12
SSBP2-203ENST00000504174 ERCC6L2Q5T890 1561 aa40.68■■■■■ 4.1
SSBP2-203ENST00000504174 SHROOM2Q13796 1616 aa40.62■■■■■ 4.09
SSBP2-203ENST00000504174 PRG4Q92954 1404 aaPredicted RBP40.42■■■■■ 4.06
SSBP2-203ENST00000504174 JPH4Q96JJ6 628 aa40.39■■■■■ 4.06
SSBP2-203ENST00000504174 RUSC2Q8N2Y8 1516 aa40.33■■■■■ 4.05
SSBP2-203ENST00000504174 KIF27Q86VH2 1401 aa40.26■■■■■ 4.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms