RNA–Protein interactions for RNA: ENST00000504099.5

SLF1-206, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 4

Gene SLF1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-206ENST00000504099 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
SLF1-206ENST00000504099 CHIC1Q5VXU3 224 aa25.82■■□□□ 1.72
SLF1-206ENST00000504099 SENP3Q9H4L4 574 aaPredicted RBP23.16■■□□□ 1.3
SLF1-206ENST00000504099 PHF23Q9BUL5 403 aaPredicted RBP22.85■■□□□ 1.25
SLF1-206ENST00000504099 FOXD1Q16676 465 aa21.52■■□□□ 1.04
SLF1-206ENST00000504099 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
SLF1-206ENST00000504099 PIAS4Q8N2W9 510 aaPredicted RBP20.2■□□□□ 0.82
SLF1-206ENST00000504099 MSH5O43196 834 aa20.17■□□□□ 0.82
SLF1-206ENST00000504099 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
SLF1-206ENST00000504099 ADRA2BP18089 450 aa20.15■□□□□ 0.82
SLF1-206ENST00000504099 POTEDQ86YR6 584 aa19.48■□□□□ 0.71
SLF1-206ENST00000504099 NISCHQ9Y2I1 1504 aa18.68■□□□□ 0.58
SLF1-206ENST00000504099 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
SLF1-206ENST00000504099 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
SLF1-206ENST00000504099 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
SLF1-206ENST00000504099 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
SLF1-206ENST00000504099 CNKSR2Q8WXI2 1034 aa17.81■□□□□ 0.44
SLF1-206ENST00000504099 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
SLF1-206ENST00000504099 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
SLF1-206ENST00000504099 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
SLF1-206ENST00000504099 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
SLF1-206ENST00000504099 CACNB1Q02641 598 aaPredicted RBP17.3■□□□□ 0.36
SLF1-206ENST00000504099 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
SLF1-206ENST00000504099 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
SLF1-206ENST00000504099 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
SLF1-206ENST00000504099 KCNA4P22459 653 aa16.97■□□□□ 0.31
SLF1-206ENST00000504099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
SLF1-206ENST00000504099 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
SLF1-206ENST00000504099 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
SLF1-206ENST00000504099 ABCC9O60706 1549 aa16.88■□□□□ 0.29
SLF1-206ENST00000504099 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
SLF1-206ENST00000504099 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
SLF1-206ENST00000504099 CAPN15O75808 1086 aa16.33■□□□□ 0.2
SLF1-206ENST00000504099 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
SLF1-206ENST00000504099 APLP2Q06481 763 aa16.2■□□□□ 0.18
SLF1-206ENST00000504099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
SLF1-206ENST00000504099 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
SLF1-206ENST00000504099 DSG3P32926 999 aa16.11■□□□□ 0.17
SLF1-206ENST00000504099 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
SLF1-206ENST00000504099 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
SLF1-206ENST00000504099 SAMD1Q6SPF0 538 aaPredicted RBP16.07■□□□□ 0.16
SLF1-206ENST00000504099 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
SLF1-206ENST00000504099 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
SLF1-206ENST00000504099 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
SLF1-206ENST00000504099 ABCB7O75027 752 aa15.92■□□□□ 0.14
SLF1-206ENST00000504099 NACADO15069 1562 aa15.92■□□□□ 0.14
SLF1-206ENST00000504099 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
SLF1-206ENST00000504099 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
SLF1-206ENST00000504099 DCAF8L2P0C7V8 631 aa15.71■□□□□ 0.11
SLF1-206ENST00000504099 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
SLF1-206ENST00000504099 POLA2Q14181 598 aa15.64■□□□□ 0.09
SLF1-206ENST00000504099 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
SLF1-206ENST00000504099 BICRAQ9NZM4 1560 aa15.62■□□□□ 0.09
SLF1-206ENST00000504099 ZBTB22O15209 634 aa15.53■□□□□ 0.08
SLF1-206ENST00000504099 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
SLF1-206ENST00000504099 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
SLF1-206ENST00000504099 RBM42Q9BTD8 480 aaKnown RBP15.45■□□□□ 0.06
SLF1-206ENST00000504099 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
SLF1-206ENST00000504099 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
SLF1-206ENST00000504099 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
SLF1-206ENST00000504099 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
SLF1-206ENST00000504099 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
SLF1-206ENST00000504099 POTEHQ6S545 545 aa15.32■□□□□ 0.04
SLF1-206ENST00000504099 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
SLF1-206ENST00000504099 EIF4G1Q04637 1599 aaKnown RBP15.23■□□□□ 0.03
SLF1-206ENST00000504099 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
SLF1-206ENST00000504099 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
SLF1-206ENST00000504099 AKT1S1Q96B36 256 aa15.08■□□□□ 0
SLF1-206ENST00000504099 FBLN2P98095 1184 aa15.05■□□□□ -0
SLF1-206ENST00000504099 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
SLF1-206ENST00000504099 CSRNP3Q8WYN3 585 aa14.95□□□□□ -0.02
SLF1-206ENST00000504099 REM2Q8IYK8 340 aaPredicted RBP14.93□□□□□ -0.02
SLF1-206ENST00000504099 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
SLF1-206ENST00000504099 SPDYE2BA6NHP3 402 aa14.84□□□□□ -0.03
SLF1-206ENST00000504099 SPDYE6P0CI01 402 aa14.84□□□□□ -0.03
SLF1-206ENST00000504099 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
SLF1-206ENST00000504099 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
SLF1-206ENST00000504099 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
SLF1-206ENST00000504099 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
SLF1-206ENST00000504099 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
SLF1-206ENST00000504099 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
SLF1-206ENST00000504099 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
SLF1-206ENST00000504099 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
SLF1-206ENST00000504099 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
SLF1-206ENST00000504099 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
SLF1-206ENST00000504099 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
SLF1-206ENST00000504099 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
SLF1-206ENST00000504099 HMGXB3Q12766 1538 aa14.6□□□□□ -0.07
SLF1-206ENST00000504099 SMARCA2P51531 1590 aa14.6□□□□□ -0.07
SLF1-206ENST00000504099 CUX2O14529 1486 aa14.59□□□□□ -0.07
SLF1-206ENST00000504099 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
SLF1-206ENST00000504099 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
SLF1-206ENST00000504099 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
SLF1-206ENST00000504099 NESP48681 1621 aa14.49□□□□□ -0.09
SLF1-206ENST00000504099 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
SLF1-206ENST00000504099 HAX1O00165 279 aa14.48□□□□□ -0.09
SLF1-206ENST00000504099 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
SLF1-206ENST00000504099 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
SLF1-206ENST00000504099 PRKAR2AP13861 404 aaKnown RBP14.42□□□□□ -0.1
SLF1-206ENST00000504099 SP7Q8TDD2 431 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 360.5 ms