RNA–Protein interactions for RNA: ENST00000503838.1

TMEM173-205, Transcript of transmembrane protein 173, humanhuman

TSL 5

Gene TMEM173, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-205ENST00000503838 NISCHQ9Y2I1 1504 aa37.73■■■■□ 3.63
TMEM173-205ENST00000503838 CCDC180Q9P1Z9 1646 aa33.65■■■□□ 2.98
TMEM173-205ENST00000503838 ABCC9O60706 1549 aa33.04■■■□□ 2.88
TMEM173-205ENST00000503838 RB1CC1Q8TDY2 1594 aa31.68■■■□□ 2.66
TMEM173-205ENST00000503838 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
TMEM173-205ENST00000503838 NACADO15069 1562 aa31.57■■■□□ 2.64
TMEM173-205ENST00000503838 ZCCHC6Q5VYS8 1495 aaKnown RBP31.44■■■□□ 2.62
TMEM173-205ENST00000503838 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
TMEM173-205ENST00000503838 UNC13AQ9UPW8 1703 aa31.16■■■□□ 2.58
TMEM173-205ENST00000503838 DCAF1Q9Y4B6 1507 aa31.13■■■□□ 2.57
TMEM173-205ENST00000503838 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
TMEM173-205ENST00000503838 SCRIBQ14160 1630 aa30.81■■■□□ 2.52
TMEM173-205ENST00000503838 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
TMEM173-205ENST00000503838 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
TMEM173-205ENST00000503838 SHROOM4Q9ULL8 1493 aa30.26■■■□□ 2.44
TMEM173-205ENST00000503838 EIF4G1Q04637 1599 aaKnown RBP29.94■■■□□ 2.38
TMEM173-205ENST00000503838 CC2D2AQ9P2K1 1620 aa29.88■■■□□ 2.37
TMEM173-205ENST00000503838 CECR2Q9BXF3 1484 aa29.63■■■□□ 2.33
TMEM173-205ENST00000503838 SMARCA4P51532 1647 aa29.38■■■□□ 2.29
TMEM173-205ENST00000503838 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.28
TMEM173-205ENST00000503838 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
TMEM173-205ENST00000503838 MROH2BQ7Z745 1585 aa29.14■■■□□ 2.26
TMEM173-205ENST00000503838 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
TMEM173-205ENST00000503838 NCAPD3P42695 1498 aa29.07■■■□□ 2.24
TMEM173-205ENST00000503838 HMGXB3Q12766 1538 aa29■■■□□ 2.23
TMEM173-205ENST00000503838 PEG3Q9GZU2 1588 aa28.99■■■□□ 2.23
TMEM173-205ENST00000503838 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
TMEM173-205ENST00000503838 WIZO95785 1651 aa28.91■■■□□ 2.22
TMEM173-205ENST00000503838 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.19
TMEM173-205ENST00000503838 NESP48681 1621 aa28.58■■■□□ 2.17
TMEM173-205ENST00000503838 TOP2AP11388 1531 aaKnown RBP28.51■■■□□ 2.15
TMEM173-205ENST00000503838 ERCC6Q03468 1493 aa28.46■■■□□ 2.15
TMEM173-205ENST00000503838 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
TMEM173-205ENST00000503838 KIF21AQ7Z4S6 1674 aa28.34■■■□□ 2.13
TMEM173-205ENST00000503838 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
TMEM173-205ENST00000503838 THOC2Q8NI27 1593 aaKnown RBP28.17■■■□□ 2.1
TMEM173-205ENST00000503838 PDS5BQ9NTI5 1447 aa28.15■■■□□ 2.1
TMEM173-205ENST00000503838 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
TMEM173-205ENST00000503838 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
TMEM173-205ENST00000503838 CUX2O14529 1486 aa28.08■■■□□ 2.09
TMEM173-205ENST00000503838 CFTRP13569 1480 aa28.08■■■□□ 2.09
TMEM173-205ENST00000503838 SUPT5HO00267 1087 aaKnown RBP28.02■■■□□ 2.08
TMEM173-205ENST00000503838 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
TMEM173-205ENST00000503838 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
TMEM173-205ENST00000503838 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.07
TMEM173-205ENST00000503838 WDR62O43379 1518 aa27.87■■■□□ 2.05
TMEM173-205ENST00000503838 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
TMEM173-205ENST00000503838 DNAJC5Q9H3Z4 198 aa27.62■■■□□ 2.01
TMEM173-205ENST00000503838 TOPBP1Q92547 1522 aa27.56■■■□□ 2
TMEM173-205ENST00000503838 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
TMEM173-205ENST00000503838 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
TMEM173-205ENST00000503838 IFT140Q96RY7 1462 aa27.35■■□□□ 1.97
TMEM173-205ENST00000503838 CUX1P39880 1505 aa27.35■■□□□ 1.97
TMEM173-205ENST00000503838 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
TMEM173-205ENST00000503838 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
TMEM173-205ENST00000503838 TARBP1Q13395 1621 aaKnown RBP27.29■■□□□ 1.96
TMEM173-205ENST00000503838 FGD5Q6ZNL6 1462 aa27.27■■□□□ 1.96
TMEM173-205ENST00000503838 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.96
TMEM173-205ENST00000503838 RAD54L2Q9Y4B4 1467 aa27.24■■□□□ 1.95
TMEM173-205ENST00000503838 SOGA1O94964 1423 aa27.16■■□□□ 1.94
TMEM173-205ENST00000503838 SYNJ1O43426 1573 aa27.14■■□□□ 1.93
TMEM173-205ENST00000503838 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.931e-8■■■■■ 29.1
TMEM173-205ENST00000503838 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
TMEM173-205ENST00000503838 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
TMEM173-205ENST00000503838 WRNQ14191 1432 aaPredicted RBP eCLIP27.09■■□□□ 1.93
TMEM173-205ENST00000503838 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
TMEM173-205ENST00000503838 TDRD9Q8NDG6 1382 aaKnown RBP27.05■■□□□ 1.92
TMEM173-205ENST00000503838 CHD1O14646 1710 aa27.02■■□□□ 1.92
TMEM173-205ENST00000503838 PBRM1Q86U86 1689 aa26.99■■□□□ 1.91
TMEM173-205ENST00000503838 ABCA10Q8WWZ4 1543 aa26.93■■□□□ 1.9
TMEM173-205ENST00000503838 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
TMEM173-205ENST00000503838 SNAPC4Q5SXM2 1469 aa26.91■■□□□ 1.9
TMEM173-205ENST00000503838 GAPVD1Q14C86 1478 aa26.87■■□□□ 1.89
TMEM173-205ENST00000503838 OSCARQ8IYS5 282 aa26.86■■□□□ 1.89
TMEM173-205ENST00000503838 GRIN2BQ13224 1484 aa26.86■■□□□ 1.89
TMEM173-205ENST00000503838 FBLN2P98095 1184 aa26.84■■□□□ 1.89
TMEM173-205ENST00000503838 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
TMEM173-205ENST00000503838 SYNJ2O15056 1496 aa26.69■■□□□ 1.86
TMEM173-205ENST00000503838 ADAMTS12P58397 1594 aa26.69■■□□□ 1.86
TMEM173-205ENST00000503838 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
TMEM173-205ENST00000503838 RIMBP3CA6NJZ7 1639 aa26.64■■□□□ 1.85
TMEM173-205ENST00000503838 RIMBP3BA6NNM3 1639 aa26.64■■□□□ 1.85
TMEM173-205ENST00000503838 RIMBP3Q9UFD9 1639 aa26.64■■□□□ 1.85
TMEM173-205ENST00000503838 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
TMEM173-205ENST00000503838 CLASP1Q7Z460 1538 aa26.57■■□□□ 1.84
TMEM173-205ENST00000503838 ARHGEF11O15085 1522 aa26.56■■□□□ 1.84
TMEM173-205ENST00000503838 GRIN2AQ12879 1464 aa26.54■■□□□ 1.84
TMEM173-205ENST00000503838 FHAD1B1AJZ9 1412 aa26.52■■□□□ 1.84
TMEM173-205ENST00000503838 TRIM41Q8WV44 630 aa26.51■■□□□ 1.83
TMEM173-205ENST00000503838 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
TMEM173-205ENST00000503838 CEP170Q5SW79 1584 aa26.49■■□□□ 1.83
TMEM173-205ENST00000503838 CUL7Q14999 1698 aa26.44■■□□□ 1.82
TMEM173-205ENST00000503838 NUP160Q12769 1436 aa26.38■■□□□ 1.81
TMEM173-205ENST00000503838 IGF1RP08069 1367 aa26.36■■□□□ 1.81
TMEM173-205ENST00000503838 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
TMEM173-205ENST00000503838 RUSC2Q8N2Y8 1516 aa26.34■■□□□ 1.81
TMEM173-205ENST00000503838 ERCC6L2Q5T890 1561 aa26.28■■□□□ 1.8
TMEM173-205ENST00000503838 CYB5RLQ6IPT4 315 aa26.27■■□□□ 1.8
TMEM173-205ENST00000503838 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
TMEM173-205ENST00000503838 CARMIL1Q5VZK9 1371 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms