RNA–Protein interactions for RNA: ENST00000503794.5

GNPDA1-204, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPDA1, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-204ENST00000503794 NISCHQ9Y2I1 1504 aa29.69■■■□□ 2.34
GNPDA1-204ENST00000503794 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
GNPDA1-204ENST00000503794 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
GNPDA1-204ENST00000503794 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
GNPDA1-204ENST00000503794 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
GNPDA1-204ENST00000503794 ABCC9O60706 1549 aa24.49■■□□□ 1.51
GNPDA1-204ENST00000503794 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
GNPDA1-204ENST00000503794 MYO15BQ96JP2 1530 aa24.06■■□□□ 1.44
GNPDA1-204ENST00000503794 NACADO15069 1562 aa23.98■■□□□ 1.43
GNPDA1-204ENST00000503794 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
GNPDA1-204ENST00000503794 RB1CC1Q8TDY2 1594 aa23.79■■□□□ 1.4
GNPDA1-204ENST00000503794 SUPT5HO00267 1087 aaKnown RBP23.59■■□□□ 1.37
GNPDA1-204ENST00000503794 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
GNPDA1-204ENST00000503794 PABPN1Q86U42 306 aaKnown RBP eCLIP23.17■■□□□ 1.3
GNPDA1-204ENST00000503794 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
GNPDA1-204ENST00000503794 BICRAQ9NZM4 1560 aa23.15■■□□□ 1.3
GNPDA1-204ENST00000503794 RSF1Q96T23 1441 aaPredicted RBP23.1■■□□□ 1.29
GNPDA1-204ENST00000503794 MROH2BQ7Z745 1585 aa23.01■■□□□ 1.27
GNPDA1-204ENST00000503794 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
GNPDA1-204ENST00000503794 WIZO95785 1651 aa22.86■■□□□ 1.25
GNPDA1-204ENST00000503794 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
GNPDA1-204ENST00000503794 PELP1Q8IZL8 1130 aaKnown RBP22.79■■□□□ 1.24
GNPDA1-204ENST00000503794 HRCP23327 699 aa22.55■■□□□ 1.2
GNPDA1-204ENST00000503794 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
GNPDA1-204ENST00000503794 TOP2AP11388 1531 aaKnown RBP22.51■■□□□ 1.19
GNPDA1-204ENST00000503794 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
GNPDA1-204ENST00000503794 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
GNPDA1-204ENST00000503794 ATAD2BQ9ULI0 1458 aa22.42■■□□□ 1.18
GNPDA1-204ENST00000503794 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
GNPDA1-204ENST00000503794 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
GNPDA1-204ENST00000503794 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
GNPDA1-204ENST00000503794 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
GNPDA1-204ENST00000503794 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
GNPDA1-204ENST00000503794 MYT1Q01538 1121 aa22.11■■□□□ 1.13
GNPDA1-204ENST00000503794 CC2D2AQ9P2K1 1620 aa22.11■■□□□ 1.13
GNPDA1-204ENST00000503794 TRIM41Q8WV44 630 aa22.08■■□□□ 1.12
GNPDA1-204ENST00000503794 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
GNPDA1-204ENST00000503794 ABCC8Q09428 1581 aa21.98■■□□□ 1.11
GNPDA1-204ENST00000503794 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
GNPDA1-204ENST00000503794 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
GNPDA1-204ENST00000503794 WRNQ14191 1432 aaPredicted RBP eCLIP21.73■■□□□ 1.07
GNPDA1-204ENST00000503794 PCGF6Q9BYE7 350 aa21.71■■□□□ 1.07
GNPDA1-204ENST00000503794 CFTRP13569 1480 aa21.71■■□□□ 1.07
GNPDA1-204ENST00000503794 DNAJC5BQ9UF47 199 aa21.7■■□□□ 1.06
GNPDA1-204ENST00000503794 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
GNPDA1-204ENST00000503794 SCAF1Q9H7N4 1312 aaKnown RBP21.68■■□□□ 1.06
GNPDA1-204ENST00000503794 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
GNPDA1-204ENST00000503794 EHMT2Q96KQ7 1210 aa21.61■■□□□ 1.05
GNPDA1-204ENST00000503794 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
GNPDA1-204ENST00000503794 SOGA1O94964 1423 aa21.57■■□□□ 1.04
GNPDA1-204ENST00000503794 NESP48681 1621 aa21.55■■□□□ 1.04
GNPDA1-204ENST00000503794 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
GNPDA1-204ENST00000503794 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
GNPDA1-204ENST00000503794 CUX1P39880 1505 aa21.5■■□□□ 1.03
GNPDA1-204ENST00000503794 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
GNPDA1-204ENST00000503794 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
GNPDA1-204ENST00000503794 LAMC3Q9Y6N6 1575 aa21.38■■□□□ 1.01
GNPDA1-204ENST00000503794 CSRNP3Q8WYN3 585 aa21.35■■□□□ 1.01
GNPDA1-204ENST00000503794 EEA1Q15075 1411 aa21.35■■□□□ 1.01
GNPDA1-204ENST00000503794 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
GNPDA1-204ENST00000503794 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
GNPDA1-204ENST00000503794 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
GNPDA1-204ENST00000503794 PDS5BQ9NTI5 1447 aa21.23■□□□□ 0.99
GNPDA1-204ENST00000503794 DNMBPQ6XZF7 1577 aa21.21■□□□□ 0.99
GNPDA1-204ENST00000503794 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
GNPDA1-204ENST00000503794 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
GNPDA1-204ENST00000503794 GOLGA3Q08378 1498 aa21.15■□□□□ 0.98
GNPDA1-204ENST00000503794 UBTFP17480 764 aaKnown RBP21.15■□□□□ 0.98
GNPDA1-204ENST00000503794 KIF21BO75037 1637 aa21.14■□□□□ 0.97
GNPDA1-204ENST00000503794 KIF27Q86VH2 1401 aa21.14■□□□□ 0.97
GNPDA1-204ENST00000503794 CUX2O14529 1486 aa21.13■□□□□ 0.97
GNPDA1-204ENST00000503794 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
GNPDA1-204ENST00000503794 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
GNPDA1-204ENST00000503794 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
GNPDA1-204ENST00000503794 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
GNPDA1-204ENST00000503794 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
GNPDA1-204ENST00000503794 PRXQ9BXM0 1461 aa21.03■□□□□ 0.96
GNPDA1-204ENST00000503794 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
GNPDA1-204ENST00000503794 IGF1RP08069 1367 aa20.99■□□□□ 0.95
GNPDA1-204ENST00000503794 MRC2Q9UBG0 1479 aa20.98■□□□□ 0.95
GNPDA1-204ENST00000503794 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
GNPDA1-204ENST00000503794 ZEB1P37275 1124 aaPredicted RBP20.96■□□□□ 0.95
GNPDA1-204ENST00000503794 TTBK1Q5TCY1 1321 aaPredicted RBP20.96■□□□□ 0.95
GNPDA1-204ENST00000503794 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
GNPDA1-204ENST00000503794 WDR97A6NE52 1622 aa20.94■□□□□ 0.94
GNPDA1-204ENST00000503794 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
GNPDA1-204ENST00000503794 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
GNPDA1-204ENST00000503794 TDRD9Q8NDG6 1382 aaKnown RBP20.9■□□□□ 0.94
GNPDA1-204ENST00000503794 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
GNPDA1-204ENST00000503794 TRIM26Q12899 539 aaPredicted RBP20.88■□□□□ 0.93
GNPDA1-204ENST00000503794 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
GNPDA1-204ENST00000503794 WDR62O43379 1518 aa20.85■□□□□ 0.93
GNPDA1-204ENST00000503794 CLIP1P30622 1438 aa20.85■□□□□ 0.93
GNPDA1-204ENST00000503794 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
GNPDA1-204ENST00000503794 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
GNPDA1-204ENST00000503794 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
GNPDA1-204ENST00000503794 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
GNPDA1-204ENST00000503794 GTF3C3Q9Y5Q9 886 aa20.8■□□□□ 0.92
GNPDA1-204ENST00000503794 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.91
GNPDA1-204ENST00000503794 CUL7Q14999 1698 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms