RNA–Protein interactions for RNA: ENST00000503747.5

PACRGL-209, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-209ENST00000503747 NISCHQ9Y2I1 1504 aa47.11■■■■■ 5.13
PACRGL-209ENST00000503747 CCDC180Q9P1Z9 1646 aa42.15■■■■■ 4.34
PACRGL-209ENST00000503747 ABCC9O60706 1549 aa42.15■■■■■ 4.34
PACRGL-209ENST00000503747 RB1CC1Q8TDY2 1594 aa40.12■■■■■ 4.01
PACRGL-209ENST00000503747 NACADO15069 1562 aa39.89■■■■□ 3.98
PACRGL-209ENST00000503747 DCAF8L2P0C7V8 631 aa39.82■■■■□ 3.97
PACRGL-209ENST00000503747 DNAJC5BQ9UF47 199 aa39.61■■■■□ 3.93
PACRGL-209ENST00000503747 MYO15BQ96JP2 1530 aa39.39■■■■□ 3.9
PACRGL-209ENST00000503747 PABPN1Q86U42 306 aaKnown RBP eCLIP39.34■■■■□ 3.89
PACRGL-209ENST00000503747 UNC13AQ9UPW8 1703 aa39.2■■■■□ 3.87
PACRGL-209ENST00000503747 ZCCHC6Q5VYS8 1495 aaKnown RBP39.02■■■■□ 3.84
PACRGL-209ENST00000503747 BICRAQ9NZM4 1560 aa38.99■■■■□ 3.83
PACRGL-209ENST00000503747 DCAF1Q9Y4B6 1507 aa38.9■■■■□ 3.82
PACRGL-209ENST00000503747 SCRIBQ14160 1630 aa38.42■■■■□ 3.74
PACRGL-209ENST00000503747 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
PACRGL-209ENST00000503747 CC2D2AQ9P2K1 1620 aa38.06■■■■□ 3.68
PACRGL-209ENST00000503747 EIF4G1Q04637 1599 aaKnown RBP37.99■■■■□ 3.67
PACRGL-209ENST00000503747 CECR2Q9BXF3 1484 aa37.96■■■■□ 3.67
PACRGL-209ENST00000503747 NCAPD3P42695 1498 aa36.88■■■■□ 3.5
PACRGL-209ENST00000503747 ATAD2BQ9ULI0 1458 aa36.76■■■■□ 3.48
PACRGL-209ENST00000503747 SMARCA4P51532 1647 aa36.69■■■■□ 3.46
PACRGL-209ENST00000503747 SMARCA2P51531 1590 aa36.61■■■■□ 3.45
PACRGL-209ENST00000503747 HMGXB3Q12766 1538 aa36.53■■■■□ 3.44
PACRGL-209ENST00000503747 BAZ1AQ9NRL2 1556 aaPredicted RBP36.53■■■■□ 3.44
PACRGL-209ENST00000503747 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
PACRGL-209ENST00000503747 ERCC6Q03468 1493 aa36.35■■■■□ 3.41
PACRGL-209ENST00000503747 PEG3Q9GZU2 1588 aa36.35■■■■□ 3.41
PACRGL-209ENST00000503747 MROH2BQ7Z745 1585 aa36.31■■■■□ 3.4
PACRGL-209ENST00000503747 DNAJC5Q9H3Z4 198 aa36.29■■■■□ 3.4
PACRGL-209ENST00000503747 CUX2O14529 1486 aa36.27■■■■□ 3.4
PACRGL-209ENST00000503747 NESP48681 1621 aa36.25■■■■□ 3.39
PACRGL-209ENST00000503747 LAMC3Q9Y6N6 1575 aa35.96■■■■□ 3.35
PACRGL-209ENST00000503747 WIZO95785 1651 aa35.85■■■■□ 3.33
PACRGL-209ENST00000503747 PDS5BQ9NTI5 1447 aa35.8■■■■□ 3.32
PACRGL-209ENST00000503747 THOC2Q8NI27 1593 aaKnown RBP35.79■■■■□ 3.32
PACRGL-209ENST00000503747 CADPSQ9ULU8 1353 aa35.77■■■■□ 3.32
PACRGL-209ENST00000503747 KIF21AQ7Z4S6 1674 aa35.72■■■■□ 3.31
PACRGL-209ENST00000503747 RSF1Q96T23 1441 aaPredicted RBP35.61■■■■□ 3.29
PACRGL-209ENST00000503747 MRC2Q9UBG0 1479 aa35.45■■■■□ 3.27
PACRGL-209ENST00000503747 TOP2AP11388 1531 aaKnown RBP35.37■■■■□ 3.25
PACRGL-209ENST00000503747 CFTRP13569 1480 aa35.35■■■■□ 3.25
PACRGL-209ENST00000503747 WDR62O43379 1518 aa35.34■■■■□ 3.25
PACRGL-209ENST00000503747 FANCD2Q9BXW9 1451 aa35.31■■■■□ 3.24
PACRGL-209ENST00000503747 CEP164Q9UPV0 1460 aa35.31■■■■□ 3.24
PACRGL-209ENST00000503747 CCDC88BA6NC98 1476 aa35.06■■■■□ 3.2
PACRGL-209ENST00000503747 URB2Q14146 1524 aaKnown RBP35.02■■■■□ 3.2
PACRGL-209ENST00000503747 PRDM2Q13029 1718 aa34.89■■■■□ 3.18
PACRGL-209ENST00000503747 OSCARQ8IYS5 282 aa34.75■■■■□ 3.15
PACRGL-209ENST00000503747 TRIM41Q8WV44 630 aa34.67■■■■□ 3.14
PACRGL-209ENST00000503747 TOPBP1Q92547 1522 aa34.65■■■■□ 3.14
PACRGL-209ENST00000503747 IFT140Q96RY7 1462 aa34.64■■■■□ 3.14
PACRGL-209ENST00000503747 ABCC8Q09428 1581 aa34.6■■■■□ 3.13
PACRGL-209ENST00000503747 ZNF608Q9ULD9 1512 aaPredicted RBP34.59■■■■□ 3.13
PACRGL-209ENST00000503747 DNMBPQ6XZF7 1577 aa34.5■■■■□ 3.11
PACRGL-209ENST00000503747 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
PACRGL-209ENST00000503747 AQRO60306 1485 aaKnown RBP eCLIP34.32■■■■□ 3.08
PACRGL-209ENST00000503747 EIF4G3O43432 1585 aaKnown RBP34.32■■■■□ 3.08
PACRGL-209ENST00000503747 POLA1P09884 1462 aaPredicted RBP34.31■■■■□ 3.08
PACRGL-209ENST00000503747 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
PACRGL-209ENST00000503747 SOGA1O94964 1423 aa34.21■■■■□ 3.07
PACRGL-209ENST00000503747 RIMBP3CA6NJZ7 1639 aa34.16■■■■□ 3.06
PACRGL-209ENST00000503747 RIMBP3BA6NNM3 1639 aa34.16■■■■□ 3.06
PACRGL-209ENST00000503747 RIMBP3Q9UFD9 1639 aa34.16■■■■□ 3.06
PACRGL-209ENST00000503747 SUPT5HO00267 1087 aaKnown RBP34.14■■■■□ 3.06
PACRGL-209ENST00000503747 TDRD9Q8NDG6 1382 aaKnown RBP34.13■■■■□ 3.05
PACRGL-209ENST00000503747 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
PACRGL-209ENST00000503747 FBLN2P98095 1184 aa34.09■■■■□ 3.05
PACRGL-209ENST00000503747 CUX1P39880 1505 aa34.09■■■■□ 3.05
PACRGL-209ENST00000503747 ARHGEF11O15085 1522 aa34.07■■■■□ 3.04
PACRGL-209ENST00000503747 CHD1O14646 1710 aa34.06■■■■□ 3.04
PACRGL-209ENST00000503747 WDR97A6NE52 1622 aa33.94■■■■□ 3.02
PACRGL-209ENST00000503747 CYB5RLQ6IPT4 315 aa33.93■■■■□ 3.02
PACRGL-209ENST00000503747 SNAPC4Q5SXM2 1469 aa33.9■■■■□ 3.02
PACRGL-209ENST00000503747 CHMP7Q8WUX9 453 aaPredicted RBP33.87■■■■□ 3.01
PACRGL-209ENST00000503747 GRIN2BQ13224 1484 aa33.85■■■■□ 3.01
PACRGL-209ENST00000503747 MAGI1Q96QZ7 1491 aaPredicted RBP33.82■■■■□ 3.01
PACRGL-209ENST00000503747 GAPVD1Q14C86 1478 aa33.76■■■□□ 2.99
PACRGL-209ENST00000503747 ARAP1Q96P48 1450 aa33.76■■■□□ 2.99
PACRGL-209ENST00000503747 ABCA10Q8WWZ4 1543 aa33.74■■■□□ 2.99
PACRGL-209ENST00000503747 SYNJ2O15056 1496 aa33.72■■■□□ 2.99
PACRGL-209ENST00000503747 CLASP1Q7Z460 1538 aa33.69■■■□□ 2.98
PACRGL-209ENST00000503747 SYNJ1O43426 1573 aa33.68■■■□□ 2.98
PACRGL-209ENST00000503747 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
PACRGL-209ENST00000503747 WRNQ14191 1432 aaPredicted RBP eCLIP33.62■■■□□ 2.97
PACRGL-209ENST00000503747 ABCA5Q8WWZ7 1642 aa33.62■■■□□ 2.97
PACRGL-209ENST00000503747 TOP2BQ02880 1626 aa33.54■■■□□ 2.96
PACRGL-209ENST00000503747 BIVM-ERCC5R4GMW8 1640 aa33.52■■■□□ 2.96
PACRGL-209ENST00000503747 TRHP20396 242 aaPredicted RBP33.49■■■□□ 2.95
PACRGL-209ENST00000503747 GRIN2AQ12879 1464 aa33.4■■■□□ 2.94
PACRGL-209ENST00000503747 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
PACRGL-209ENST00000503747 FHAD1B1AJZ9 1412 aa33.33■■■□□ 2.93
PACRGL-209ENST00000503747 NUP160Q12769 1436 aa33.31■■■□□ 2.92
PACRGL-209ENST00000503747 ERICH3Q5RHP9 1530 aa33.29■■■□□ 2.92
PACRGL-209ENST00000503747 CEP170Q5SW79 1584 aa33.26■■■□□ 2.92
PACRGL-209ENST00000503747 ERCC6L2Q5T890 1561 aa33.21■■■□□ 2.91
PACRGL-209ENST00000503747 SHROOM2Q13796 1616 aa33.11■■■□□ 2.89
PACRGL-209ENST00000503747 JPH4Q96JJ6 628 aa33.07■■■□□ 2.88
PACRGL-209ENST00000503747 PRG4Q92954 1404 aaPredicted RBP33■■■□□ 2.87
PACRGL-209ENST00000503747 IGF1RP08069 1367 aa32.99■■■□□ 2.87
PACRGL-209ENST00000503747 KIF27Q86VH2 1401 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms