RNA–Protein interactions for RNA: ENST00000503708.5

FGFR4-208, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 4

Gene FGFR4, Length 770 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-208ENST00000503708 NISCHQ9Y2I1 1504 aa46.62■■■■■ 5.05
FGFR4-208ENST00000503708 CCDC180Q9P1Z9 1646 aa41.79■■■■■ 4.28
FGFR4-208ENST00000503708 ABCC9O60706 1549 aa41.74■■■■■ 4.27
FGFR4-208ENST00000503708 RB1CC1Q8TDY2 1594 aa39.8■■■■□ 3.96
FGFR4-208ENST00000503708 NACADO15069 1562 aa39.55■■■■□ 3.92
FGFR4-208ENST00000503708 DCAF8L2P0C7V8 631 aa39.45■■■■□ 3.91
FGFR4-208ENST00000503708 DNAJC5BQ9UF47 199 aa39.12■■■■□ 3.85
FGFR4-208ENST00000503708 MYO15BQ96JP2 1530 aa39.03■■■■□ 3.84
FGFR4-208ENST00000503708 PABPN1Q86U42 306 aaKnown RBP eCLIP38.93■■■■□ 3.82
FGFR4-208ENST00000503708 UNC13AQ9UPW8 1703 aa38.79■■■■□ 3.8
FGFR4-208ENST00000503708 ZCCHC6Q5VYS8 1495 aaKnown RBP38.61■■■■□ 3.77
FGFR4-208ENST00000503708 BICRAQ9NZM4 1560 aa38.56■■■■□ 3.76
FGFR4-208ENST00000503708 DCAF1Q9Y4B6 1507 aa38.53■■■■□ 3.76
FGFR4-208ENST00000503708 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
FGFR4-208ENST00000503708 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
FGFR4-208ENST00000503708 CC2D2AQ9P2K1 1620 aa37.71■■■■□ 3.63
FGFR4-208ENST00000503708 EIF4G1Q04637 1599 aaKnown RBP37.64■■■■□ 3.62
FGFR4-208ENST00000503708 CECR2Q9BXF3 1484 aa37.64■■■■□ 3.62
FGFR4-208ENST00000503708 NCAPD3P42695 1498 aa36.51■■■■□ 3.44
FGFR4-208ENST00000503708 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
FGFR4-208ENST00000503708 SMARCA4P51532 1647 aa36.32■■■■□ 3.4
FGFR4-208ENST00000503708 SMARCA2P51531 1590 aa36.32■■■■□ 3.4
FGFR4-208ENST00000503708 HMGXB3Q12766 1538 aa36.21■■■■□ 3.39
FGFR4-208ENST00000503708 BAZ1AQ9NRL2 1556 aaPredicted RBP36.2■■■■□ 3.39
FGFR4-208ENST00000503708 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
FGFR4-208ENST00000503708 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
FGFR4-208ENST00000503708 CUX2O14529 1486 aa36.01■■■■□ 3.36
FGFR4-208ENST00000503708 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
FGFR4-208ENST00000503708 DNAJC5Q9H3Z4 198 aa35.98■■■■□ 3.35
FGFR4-208ENST00000503708 MROH2BQ7Z745 1585 aa35.89■■■■□ 3.34
FGFR4-208ENST00000503708 NESP48681 1621 aa35.85■■■■□ 3.33
FGFR4-208ENST00000503708 LAMC3Q9Y6N6 1575 aa35.68■■■■□ 3.3
FGFR4-208ENST00000503708 PDS5BQ9NTI5 1447 aa35.53■■■■□ 3.28
FGFR4-208ENST00000503708 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
FGFR4-208ENST00000503708 WIZO95785 1651 aa35.45■■■■□ 3.27
FGFR4-208ENST00000503708 CADPSQ9ULU8 1353 aa35.43■■■■□ 3.26
FGFR4-208ENST00000503708 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
FGFR4-208ENST00000503708 RSF1Q96T23 1441 aaPredicted RBP35.2■■■■□ 3.23
FGFR4-208ENST00000503708 MRC2Q9UBG0 1479 aa35.15■■■■□ 3.22
FGFR4-208ENST00000503708 WDR62O43379 1518 aa35.03■■■■□ 3.2
FGFR4-208ENST00000503708 CEP164Q9UPV0 1460 aa35.03■■■■□ 3.2
FGFR4-208ENST00000503708 TOP2AP11388 1531 aaKnown RBP35.02■■■■□ 3.2
FGFR4-208ENST00000503708 CFTRP13569 1480 aa35.01■■■■□ 3.19
FGFR4-208ENST00000503708 FANCD2Q9BXW9 1451 aa34.99■■■■□ 3.19
FGFR4-208ENST00000503708 CCDC88BA6NC98 1476 aa34.66■■■■□ 3.14
FGFR4-208ENST00000503708 URB2Q14146 1524 aaKnown RBP34.65■■■■□ 3.14
FGFR4-208ENST00000503708 PRDM2Q13029 1718 aa34.59■■■■□ 3.13
FGFR4-208ENST00000503708 OSCARQ8IYS5 282 aa34.47■■■■□ 3.11
FGFR4-208ENST00000503708 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
FGFR4-208ENST00000503708 IFT140Q96RY7 1462 aa34.34■■■■□ 3.09
FGFR4-208ENST00000503708 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
FGFR4-208ENST00000503708 TOPBP1Q92547 1522 aa34.31■■■■□ 3.08
FGFR4-208ENST00000503708 ZNF608Q9ULD9 1512 aaPredicted RBP34.22■■■■□ 3.07
FGFR4-208ENST00000503708 DNMBPQ6XZF7 1577 aa34.19■■■■□ 3.06
FGFR4-208ENST00000503708 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
FGFR4-208ENST00000503708 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
FGFR4-208ENST00000503708 AQRO60306 1485 aaKnown RBP eCLIP33.96■■■■□ 3.031e-10■■■■■ 42.2
FGFR4-208ENST00000503708 POLA1P09884 1462 aaPredicted RBP33.96■■■■□ 3.03
FGFR4-208ENST00000503708 SOGA1O94964 1423 aa33.87■■■■□ 3.01
FGFR4-208ENST00000503708 RIMBP3CA6NJZ7 1639 aa33.86■■■■□ 3.01
FGFR4-208ENST00000503708 RIMBP3BA6NNM3 1639 aa33.86■■■■□ 3.01
FGFR4-208ENST00000503708 RIMBP3Q9UFD9 1639 aa33.86■■■■□ 3.01
FGFR4-208ENST00000503708 RAD54L2Q9Y4B4 1467 aa33.83■■■■□ 3.01
FGFR4-208ENST00000503708 FBLN2P98095 1184 aa33.82■■■■□ 3
FGFR4-208ENST00000503708 ARHGEF11O15085 1522 aa33.78■■■■□ 3
FGFR4-208ENST00000503708 TDRD9Q8NDG6 1382 aaKnown RBP33.77■■■■□ 3
FGFR4-208ENST00000503708 FGD5Q6ZNL6 1462 aa33.76■■■□□ 2.99
FGFR4-208ENST00000503708 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
FGFR4-208ENST00000503708 CHD1O14646 1710 aa33.75■■■□□ 2.99
FGFR4-208ENST00000503708 CUX1P39880 1505 aa33.71■■■□□ 2.99
FGFR4-208ENST00000503708 WDR97A6NE52 1622 aa33.7■■■□□ 2.99
FGFR4-208ENST00000503708 CYB5RLQ6IPT4 315 aa33.63■■■□□ 2.97
FGFR4-208ENST00000503708 CHMP7Q8WUX9 453 aaPredicted RBP33.6■■■□□ 2.97
FGFR4-208ENST00000503708 SNAPC4Q5SXM2 1469 aa33.59■■■□□ 2.97
FGFR4-208ENST00000503708 GRIN2BQ13224 1484 aa33.56■■■□□ 2.96
FGFR4-208ENST00000503708 MAGI1Q96QZ7 1491 aaPredicted RBP33.55■■■□□ 2.96
FGFR4-208ENST00000503708 GAPVD1Q14C86 1478 aa33.44■■■□□ 2.94
FGFR4-208ENST00000503708 ARAP1Q96P48 1450 aa33.44■■■□□ 2.94
FGFR4-208ENST00000503708 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
FGFR4-208ENST00000503708 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
FGFR4-208ENST00000503708 ABCA10Q8WWZ4 1543 aa33.4■■■□□ 2.94
FGFR4-208ENST00000503708 CLASP1Q7Z460 1538 aa33.38■■■□□ 2.93
FGFR4-208ENST00000503708 PBRM1Q86U86 1689 aa33.34■■■□□ 2.93
FGFR4-208ENST00000503708 WRNQ14191 1432 aaPredicted RBP eCLIP33.33■■■□□ 2.93
FGFR4-208ENST00000503708 ABCA5Q8WWZ7 1642 aa33.28■■■□□ 2.92
FGFR4-208ENST00000503708 TRHP20396 242 aaPredicted RBP33.27■■■□□ 2.92
FGFR4-208ENST00000503708 TOP2BQ02880 1626 aa33.21■■■□□ 2.91
FGFR4-208ENST00000503708 BIVM-ERCC5R4GMW8 1640 aa33.19■■■□□ 2.9
FGFR4-208ENST00000503708 GRIN2AQ12879 1464 aa33.09■■■□□ 2.89
FGFR4-208ENST00000503708 FHAD1B1AJZ9 1412 aa33.03■■■□□ 2.88
FGFR4-208ENST00000503708 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
FGFR4-208ENST00000503708 ERICH3Q5RHP9 1530 aa33■■■□□ 2.87
FGFR4-208ENST00000503708 NUP160Q12769 1436 aa32.98■■■□□ 2.87
FGFR4-208ENST00000503708 CEP170Q5SW79 1584 aa32.92■■■□□ 2.86
FGFR4-208ENST00000503708 ERCC6L2Q5T890 1561 aa32.83■■■□□ 2.85
FGFR4-208ENST00000503708 SHROOM2Q13796 1616 aa32.79■■■□□ 2.84
FGFR4-208ENST00000503708 JPH4Q96JJ6 628 aa32.74■■■□□ 2.83
FGFR4-208ENST00000503708 PRG4Q92954 1404 aaPredicted RBP32.69■■■□□ 2.82
FGFR4-208ENST00000503708 KIF27Q86VH2 1401 aa32.64■■■□□ 2.82
FGFR4-208ENST00000503708 IGF1RP08069 1367 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms