RNA–Protein interactions for RNA: ENST00000503580.1

LINC01060-202, Transcript of long intergenic non-protein coding RNA 1060, humanhuman

TSL 3

Gene LINC01060, Length 418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01060-202ENST00000503580 NISCHQ9Y2I1 1504 aa32.04■■■□□ 2.72
LINC01060-202ENST00000503580 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
LINC01060-202ENST00000503580 ABCC9O60706 1549 aa27.12■■□□□ 1.93
LINC01060-202ENST00000503580 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
LINC01060-202ENST00000503580 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
LINC01060-202ENST00000503580 MYO15BQ96JP2 1530 aa26.58■■□□□ 1.85
LINC01060-202ENST00000503580 NACADO15069 1562 aa26.49■■□□□ 1.83
LINC01060-202ENST00000503580 DCAF8L2P0C7V8 631 aa26.4■■□□□ 1.82
LINC01060-202ENST00000503580 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
LINC01060-202ENST00000503580 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
LINC01060-202ENST00000503580 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
LINC01060-202ENST00000503580 BICRAQ9NZM4 1560 aa25.53■■□□□ 1.68
LINC01060-202ENST00000503580 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
LINC01060-202ENST00000503580 PABPN1Q86U42 306 aaKnown RBP eCLIP25.4■■□□□ 1.66
LINC01060-202ENST00000503580 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
LINC01060-202ENST00000503580 EIF4G1Q04637 1599 aaKnown RBP24.83■■□□□ 1.57
LINC01060-202ENST00000503580 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
LINC01060-202ENST00000503580 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
LINC01060-202ENST00000503580 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
LINC01060-202ENST00000503580 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
LINC01060-202ENST00000503580 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
LINC01060-202ENST00000503580 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
LINC01060-202ENST00000503580 ATAD2BQ9ULI0 1458 aa24.51■■□□□ 1.51
LINC01060-202ENST00000503580 SMARCA2P51531 1590 aa24.51■■□□□ 1.51
LINC01060-202ENST00000503580 NCAPD3P42695 1498 aa24.45■■□□□ 1.51
LINC01060-202ENST00000503580 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
LINC01060-202ENST00000503580 HMGXB3Q12766 1538 aa24.38■■□□□ 1.49
LINC01060-202ENST00000503580 WIZO95785 1651 aa24.34■■□□□ 1.49
LINC01060-202ENST00000503580 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
LINC01060-202ENST00000503580 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
LINC01060-202ENST00000503580 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
LINC01060-202ENST00000503580 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
LINC01060-202ENST00000503580 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
LINC01060-202ENST00000503580 CFTRP13569 1480 aa23.72■■□□□ 1.39
LINC01060-202ENST00000503580 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
LINC01060-202ENST00000503580 NESP48681 1621 aa23.6■■□□□ 1.37
LINC01060-202ENST00000503580 PDS5BQ9NTI5 1447 aa23.54■■□□□ 1.36
LINC01060-202ENST00000503580 FANCD2Q9BXW9 1451 aa23.45■■□□□ 1.34
LINC01060-202ENST00000503580 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
LINC01060-202ENST00000503580 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
LINC01060-202ENST00000503580 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
LINC01060-202ENST00000503580 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
LINC01060-202ENST00000503580 MRC2Q9UBG0 1479 aa23.25■■□□□ 1.31
LINC01060-202ENST00000503580 ABCC8Q09428 1581 aa23.2■■□□□ 1.3
LINC01060-202ENST00000503580 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
LINC01060-202ENST00000503580 WDR62O43379 1518 aa23.18■■□□□ 1.3
LINC01060-202ENST00000503580 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
LINC01060-202ENST00000503580 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
LINC01060-202ENST00000503580 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.3
LINC01060-202ENST00000503580 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
LINC01060-202ENST00000503580 CUX1P39880 1505 aa23.12■■□□□ 1.29
LINC01060-202ENST00000503580 TOP2BQ02880 1626 aa23.05■■□□□ 1.28
LINC01060-202ENST00000503580 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
LINC01060-202ENST00000503580 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
LINC01060-202ENST00000503580 CUX2O14529 1486 aa23.03■■□□□ 1.28
LINC01060-202ENST00000503580 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
LINC01060-202ENST00000503580 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
LINC01060-202ENST00000503580 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
LINC01060-202ENST00000503580 IFT140Q96RY7 1462 aa22.9■■□□□ 1.26
LINC01060-202ENST00000503580 TRIM41Q8WV44 630 aa22.89■■□□□ 1.25
LINC01060-202ENST00000503580 SOGA1O94964 1423 aa22.87■■□□□ 1.25
LINC01060-202ENST00000503580 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
LINC01060-202ENST00000503580 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
LINC01060-202ENST00000503580 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
LINC01060-202ENST00000503580 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
LINC01060-202ENST00000503580 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
LINC01060-202ENST00000503580 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
LINC01060-202ENST00000503580 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
LINC01060-202ENST00000503580 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.22
LINC01060-202ENST00000503580 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
LINC01060-202ENST00000503580 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
LINC01060-202ENST00000503580 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.21
LINC01060-202ENST00000503580 EEA1Q15075 1411 aa22.6■■□□□ 1.21
LINC01060-202ENST00000503580 GRIN2BQ13224 1484 aa22.58■■□□□ 1.2
LINC01060-202ENST00000503580 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
LINC01060-202ENST00000503580 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
LINC01060-202ENST00000503580 IGF1RP08069 1367 aa22.5■■□□□ 1.19
LINC01060-202ENST00000503580 MAGI1Q96QZ7 1491 aaPredicted RBP22.48■■□□□ 1.19
LINC01060-202ENST00000503580 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
LINC01060-202ENST00000503580 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
LINC01060-202ENST00000503580 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
LINC01060-202ENST00000503580 CSRNP3Q8WYN3 585 aa22.41■■□□□ 1.18
LINC01060-202ENST00000503580 ADAMTS12P58397 1594 aa22.39■■□□□ 1.18
LINC01060-202ENST00000503580 CUL7Q14999 1698 aa22.39■■□□□ 1.17
LINC01060-202ENST00000503580 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
LINC01060-202ENST00000503580 PRXQ9BXM0 1461 aa22.37■■□□□ 1.17
LINC01060-202ENST00000503580 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
LINC01060-202ENST00000503580 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
LINC01060-202ENST00000503580 RAPGEF2Q9Y4G8 1499 aa22.3■■□□□ 1.16
LINC01060-202ENST00000503580 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
LINC01060-202ENST00000503580 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
LINC01060-202ENST00000503580 KIF21BO75037 1637 aa22.26■■□□□ 1.15
LINC01060-202ENST00000503580 NUP160Q12769 1436 aa22.2■■□□□ 1.14
LINC01060-202ENST00000503580 FBLN2P98095 1184 aa22.19■■□□□ 1.14
LINC01060-202ENST00000503580 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
LINC01060-202ENST00000503580 CHD1O14646 1710 aa22.14■■□□□ 1.14
LINC01060-202ENST00000503580 CEP170Q5SW79 1584 aa22.11■■□□□ 1.13
LINC01060-202ENST00000503580 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
LINC01060-202ENST00000503580 KIAA0586Q9BVV6 1533 aa22.08■■□□□ 1.13
LINC01060-202ENST00000503580 CLASP1Q7Z460 1538 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 379.8 ms