RNA–Protein interactions for RNA: ENST00000503483.6

CKMT2-AS1-204, CKMT2 antisense RNA 1, humanhuman

TSL 3

Gene CKMT2-AS1, Length 572 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKMT2-AS1-204ENST00000503483 NISCHQ9Y2I1 1504 aa27.21■■□□□ 1.95
CKMT2-AS1-204ENST00000503483 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
CKMT2-AS1-204ENST00000503483 ABCC9O60706 1549 aa23.81■■□□□ 1.4
CKMT2-AS1-204ENST00000503483 DCAF8L2P0C7V8 631 aa23.1■■□□□ 1.29
CKMT2-AS1-204ENST00000503483 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
CKMT2-AS1-204ENST00000503483 RB1CC1Q8TDY2 1594 aa22.81■■□□□ 1.24
CKMT2-AS1-204ENST00000503483 NACADO15069 1562 aa22.77■■□□□ 1.24
CKMT2-AS1-204ENST00000503483 ZCCHC6Q5VYS8 1495 aaKnown RBP22.59■■□□□ 1.21
CKMT2-AS1-204ENST00000503483 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
CKMT2-AS1-204ENST00000503483 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
CKMT2-AS1-204ENST00000503483 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
CKMT2-AS1-204ENST00000503483 UNC13AQ9UPW8 1703 aa22.15■■□□□ 1.14
CKMT2-AS1-204ENST00000503483 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
CKMT2-AS1-204ENST00000503483 BICRAQ9NZM4 1560 aa22.05■■□□□ 1.12
CKMT2-AS1-204ENST00000503483 DNAJC5BQ9UF47 199 aa21.99■■□□□ 1.11
CKMT2-AS1-204ENST00000503483 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
CKMT2-AS1-204ENST00000503483 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
CKMT2-AS1-204ENST00000503483 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
CKMT2-AS1-204ENST00000503483 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
CKMT2-AS1-204ENST00000503483 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.02
CKMT2-AS1-204ENST00000503483 BAZ1AQ9NRL2 1556 aaPredicted RBP21.08■□□□□ 0.97
CKMT2-AS1-204ENST00000503483 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
CKMT2-AS1-204ENST00000503483 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
CKMT2-AS1-204ENST00000503483 ATAD2BQ9ULI0 1458 aa21.05■□□□□ 0.96
CKMT2-AS1-204ENST00000503483 SMARCA2P51531 1590 aa20.99■□□□□ 0.95
CKMT2-AS1-204ENST00000503483 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
CKMT2-AS1-204ENST00000503483 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
CKMT2-AS1-204ENST00000503483 HMGXB3Q12766 1538 aa20.84■□□□□ 0.93
CKMT2-AS1-204ENST00000503483 PEG3Q9GZU2 1588 aa20.84■□□□□ 0.93
CKMT2-AS1-204ENST00000503483 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
CKMT2-AS1-204ENST00000503483 WIZO95785 1651 aa20.72■□□□□ 0.91
CKMT2-AS1-204ENST00000503483 NESP48681 1621 aa20.56■□□□□ 0.88
CKMT2-AS1-204ENST00000503483 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
CKMT2-AS1-204ENST00000503483 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
CKMT2-AS1-204ENST00000503483 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
CKMT2-AS1-204ENST00000503483 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
CKMT2-AS1-204ENST00000503483 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
CKMT2-AS1-204ENST00000503483 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
CKMT2-AS1-204ENST00000503483 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.85
CKMT2-AS1-204ENST00000503483 CFTRP13569 1480 aa20.29■□□□□ 0.84
CKMT2-AS1-204ENST00000503483 CUX2O14529 1486 aa20.28■□□□□ 0.84
CKMT2-AS1-204ENST00000503483 FANCD2Q9BXW9 1451 aa20.21■□□□□ 0.83
CKMT2-AS1-204ENST00000503483 KIF21AQ7Z4S6 1674 aa20.2■□□□□ 0.82
CKMT2-AS1-204ENST00000503483 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
CKMT2-AS1-204ENST00000503483 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
CKMT2-AS1-204ENST00000503483 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
CKMT2-AS1-204ENST00000503483 WDR62O43379 1518 aa20.02■□□□□ 0.79
CKMT2-AS1-204ENST00000503483 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
CKMT2-AS1-204ENST00000503483 PRDM2Q13029 1718 aa19.95■□□□□ 0.78
CKMT2-AS1-204ENST00000503483 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
CKMT2-AS1-204ENST00000503483 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
CKMT2-AS1-204ENST00000503483 DNAJC5Q9H3Z4 198 aa19.88■□□□□ 0.77
CKMT2-AS1-204ENST00000503483 TOPBP1Q92547 1522 aa19.85■□□□□ 0.77
CKMT2-AS1-204ENST00000503483 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
CKMT2-AS1-204ENST00000503483 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
CKMT2-AS1-204ENST00000503483 SOGA1O94964 1423 aa19.71■□□□□ 0.75
CKMT2-AS1-204ENST00000503483 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
CKMT2-AS1-204ENST00000503483 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
CKMT2-AS1-204ENST00000503483 CUX1P39880 1505 aa19.66■□□□□ 0.74
CKMT2-AS1-204ENST00000503483 RAD54L2Q9Y4B4 1467 aa19.65■□□□□ 0.74
CKMT2-AS1-204ENST00000503483 OSCARQ8IYS5 282 aa19.64■□□□□ 0.73
CKMT2-AS1-204ENST00000503483 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
CKMT2-AS1-204ENST00000503483 AQRO60306 1485 aaKnown RBP eCLIP19.62■□□□□ 0.73
CKMT2-AS1-204ENST00000503483 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
CKMT2-AS1-204ENST00000503483 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
CKMT2-AS1-204ENST00000503483 TARBP1Q13395 1621 aaKnown RBP19.57■□□□□ 0.72
CKMT2-AS1-204ENST00000503483 FBLN2P98095 1184 aa19.55■□□□□ 0.72
CKMT2-AS1-204ENST00000503483 EIF4G3O43432 1585 aaKnown RBP19.49■□□□□ 0.71
CKMT2-AS1-204ENST00000503483 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
CKMT2-AS1-204ENST00000503483 PHF23Q9BUL5 403 aaPredicted RBP19.47■□□□□ 0.71
CKMT2-AS1-204ENST00000503483 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
CKMT2-AS1-204ENST00000503483 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
CKMT2-AS1-204ENST00000503483 GAPVD1Q14C86 1478 aa19.42■□□□□ 0.7
CKMT2-AS1-204ENST00000503483 ABCA10Q8WWZ4 1543 aa19.42■□□□□ 0.7
CKMT2-AS1-204ENST00000503483 GRIN2BQ13224 1484 aa19.41■□□□□ 0.7
CKMT2-AS1-204ENST00000503483 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
CKMT2-AS1-204ENST00000503483 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
CKMT2-AS1-204ENST00000503483 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
CKMT2-AS1-204ENST00000503483 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
CKMT2-AS1-204ENST00000503483 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
CKMT2-AS1-204ENST00000503483 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
CKMT2-AS1-204ENST00000503483 ABCA5Q8WWZ7 1642 aa19.26■□□□□ 0.67
CKMT2-AS1-204ENST00000503483 CHD1O14646 1710 aa19.25■□□□□ 0.67
CKMT2-AS1-204ENST00000503483 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
CKMT2-AS1-204ENST00000503483 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
CKMT2-AS1-204ENST00000503483 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
CKMT2-AS1-204ENST00000503483 ERICH3Q5RHP9 1530 aa19.18■□□□□ 0.66
CKMT2-AS1-204ENST00000503483 IGF1RP08069 1367 aa19.17■□□□□ 0.66
CKMT2-AS1-204ENST00000503483 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
CKMT2-AS1-204ENST00000503483 GRIN2AQ12879 1464 aa19.13■□□□□ 0.65
CKMT2-AS1-204ENST00000503483 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
CKMT2-AS1-204ENST00000503483 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
CKMT2-AS1-204ENST00000503483 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
CKMT2-AS1-204ENST00000503483 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
CKMT2-AS1-204ENST00000503483 ADAMTS12P58397 1594 aa19.09■□□□□ 0.65
CKMT2-AS1-204ENST00000503483 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
CKMT2-AS1-204ENST00000503483 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
CKMT2-AS1-204ENST00000503483 JPH4Q96JJ6 628 aa19.04■□□□□ 0.64
CKMT2-AS1-204ENST00000503483 NUP160Q12769 1436 aa19.03■□□□□ 0.64
CKMT2-AS1-204ENST00000503483 RUSC2Q8N2Y8 1516 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms