RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 NISCHQ9Y2I1 1504 aa32.94■■■□□ 2.86
TRIO-205ENST00000503399 ABCC9O60706 1549 aa30■■■□□ 2.39
TRIO-205ENST00000503399 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
TRIO-205ENST00000503399 RB1CC1Q8TDY2 1594 aa28.4■■■□□ 2.14
TRIO-205ENST00000503399 DNAJC5BQ9UF47 199 aa28.31■■■□□ 2.12
TRIO-205ENST00000503399 NACADO15069 1562 aa28.11■■■□□ 2.09
TRIO-205ENST00000503399 DCAF8L2P0C7V8 631 aa28.03■■■□□ 2.08
TRIO-205ENST00000503399 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.06
TRIO-205ENST00000503399 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
TRIO-205ENST00000503399 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
TRIO-205ENST00000503399 BICRAQ9NZM4 1560 aa27.56■■■□□ 2
TRIO-205ENST00000503399 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
TRIO-205ENST00000503399 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
TRIO-205ENST00000503399 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
TRIO-205ENST00000503399 SCRIBQ14160 1630 aa27.1■■□□□ 1.93
TRIO-205ENST00000503399 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
TRIO-205ENST00000503399 CECR2Q9BXF3 1484 aa27.03■■□□□ 1.92
TRIO-205ENST00000503399 EIF4G1Q04637 1599 aaKnown RBP26.92■■□□□ 1.9
TRIO-205ENST00000503399 DNAJC5Q9H3Z4 198 aa26.17■■□□□ 1.78
TRIO-205ENST00000503399 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
TRIO-205ENST00000503399 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
TRIO-205ENST00000503399 CUX2O14529 1486 aa25.91■■□□□ 1.74
TRIO-205ENST00000503399 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
TRIO-205ENST00000503399 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
TRIO-205ENST00000503399 SMARCA2P51531 1590 aa25.77■■□□□ 1.72
TRIO-205ENST00000503399 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
TRIO-205ENST00000503399 NESP48681 1621 aa25.68■■□□□ 1.7
TRIO-205ENST00000503399 BAZ1BQ9UIG0 1483 aaKnown RBP25.63■■□□□ 1.69
TRIO-205ENST00000503399 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
TRIO-205ENST00000503399 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
TRIO-205ENST00000503399 THOC2Q8NI27 1593 aaKnown RBP25.46■■□□□ 1.67
TRIO-205ENST00000503399 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
TRIO-205ENST00000503399 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
TRIO-205ENST00000503399 KIF21AQ7Z4S6 1674 aa25.35■■□□□ 1.65
TRIO-205ENST00000503399 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
TRIO-205ENST00000503399 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
TRIO-205ENST00000503399 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
TRIO-205ENST00000503399 WIZO95785 1651 aa25.1■■□□□ 1.61
TRIO-205ENST00000503399 WDR62O43379 1518 aa25.04■■□□□ 1.6
TRIO-205ENST00000503399 TRIM41Q8WV44 630 aa25.03■■□□□ 1.6
TRIO-205ENST00000503399 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
TRIO-205ENST00000503399 FANCD2Q9BXW9 1451 aa24.91■■□□□ 1.58
TRIO-205ENST00000503399 CFTRP13569 1480 aa24.81■■□□□ 1.56
TRIO-205ENST00000503399 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
TRIO-205ENST00000503399 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
TRIO-205ENST00000503399 URB2Q14146 1524 aaKnown RBP24.71■■□□□ 1.55
TRIO-205ENST00000503399 OSCARQ8IYS5 282 aa24.69■■□□□ 1.54
TRIO-205ENST00000503399 PRDM2Q13029 1718 aa24.58■■□□□ 1.52
TRIO-205ENST00000503399 CCDC88BA6NC98 1476 aa24.47■■□□□ 1.51
TRIO-205ENST00000503399 ZNF608Q9ULD9 1512 aaPredicted RBP24.46■■□□□ 1.51
TRIO-205ENST00000503399 IFT140Q96RY7 1462 aa24.45■■□□□ 1.51
TRIO-205ENST00000503399 RIMBP3CA6NJZ7 1639 aa24.43■■□□□ 1.5
TRIO-205ENST00000503399 RIMBP3BA6NNM3 1639 aa24.43■■□□□ 1.5
TRIO-205ENST00000503399 RIMBP3Q9UFD9 1639 aa24.43■■□□□ 1.5
TRIO-205ENST00000503399 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
TRIO-205ENST00000503399 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.48
TRIO-205ENST00000503399 ARHGEF11O15085 1522 aa24.31■■□□□ 1.48
TRIO-205ENST00000503399 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
TRIO-205ENST00000503399 DNMBPQ6XZF7 1577 aa24.29■■□□□ 1.48
TRIO-205ENST00000503399 AQRO60306 1485 aaKnown RBP eCLIP24.21■■□□□ 1.47
TRIO-205ENST00000503399 CHD1O14646 1710 aa24.2■■□□□ 1.46
TRIO-205ENST00000503399 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
TRIO-205ENST00000503399 CYB5RLQ6IPT4 315 aa24.17■■□□□ 1.46
TRIO-205ENST00000503399 FBLN2P98095 1184 aa24.16■■□□□ 1.46
TRIO-205ENST00000503399 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
TRIO-205ENST00000503399 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
TRIO-205ENST00000503399 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
TRIO-205ENST00000503399 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
TRIO-205ENST00000503399 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
TRIO-205ENST00000503399 SOGA1O94964 1423 aa24.02■■□□□ 1.44
TRIO-205ENST00000503399 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
TRIO-205ENST00000503399 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
TRIO-205ENST00000503399 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
TRIO-205ENST00000503399 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
TRIO-205ENST00000503399 CUX1P39880 1505 aa23.89■■□□□ 1.41
TRIO-205ENST00000503399 CLASP1Q7Z460 1538 aa23.88■■□□□ 1.41
TRIO-205ENST00000503399 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
TRIO-205ENST00000503399 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
TRIO-205ENST00000503399 GRIN2BQ13224 1484 aa23.84■■□□□ 1.41
TRIO-205ENST00000503399 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
TRIO-205ENST00000503399 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
TRIO-205ENST00000503399 GAPVD1Q14C86 1478 aa23.73■■□□□ 1.39
TRIO-205ENST00000503399 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
TRIO-205ENST00000503399 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.38
TRIO-205ENST00000503399 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
TRIO-205ENST00000503399 GRIN2AQ12879 1464 aa23.55■■□□□ 1.36
TRIO-205ENST00000503399 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
TRIO-205ENST00000503399 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
TRIO-205ENST00000503399 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
TRIO-205ENST00000503399 ADAMTS12P58397 1594 aa23.51■■□□□ 1.35
TRIO-205ENST00000503399 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
TRIO-205ENST00000503399 NUP160Q12769 1436 aa23.44■■□□□ 1.34
TRIO-205ENST00000503399 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
TRIO-205ENST00000503399 TOP2BQ02880 1626 aa23.42■■□□□ 1.34
TRIO-205ENST00000503399 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
TRIO-205ENST00000503399 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
TRIO-205ENST00000503399 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
TRIO-205ENST00000503399 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
TRIO-205ENST00000503399 KIF13AQ9H1H9 1805 aa23.22■■□□□ 1.31
TRIO-205ENST00000503399 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms