RNA–Protein interactions for RNA: ENST00000503326.5

COPB2-203, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 3

Gene COPB2, Length 433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-203ENST00000503326 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
COPB2-203ENST00000503326 CHIC1Q5VXU3 224 aa13.4□□□□□ -0.26
COPB2-203ENST00000503326 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
COPB2-203ENST00000503326 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
COPB2-203ENST00000503326 FOXD1Q16676 465 aa11.54□□□□□ -0.56
COPB2-203ENST00000503326 POTEDQ86YR6 584 aa11.19□□□□□ -0.62
COPB2-203ENST00000503326 MSH5O43196 834 aa10.86□□□□□ -0.67
COPB2-203ENST00000503326 PIAS4Q8N2W9 510 aaPredicted RBP10.67□□□□□ -0.7
COPB2-203ENST00000503326 PPP6R1Q9UPN7 881 aa10.57□□□□□ -0.72
COPB2-203ENST00000503326 ADRA2BP18089 450 aa10.52□□□□□ -0.73
COPB2-203ENST00000503326 PLPPR3Q6T4P5 718 aa10.5□□□□□ -0.73
COPB2-203ENST00000503326 NISCHQ9Y2I1 1504 aa10.13□□□□□ -0.79
COPB2-203ENST00000503326 MAPK8IP2Q13387 824 aaPredicted RBP9.77□□□□□ -0.85
COPB2-203ENST00000503326 ABCC9O60706 1549 aa9.76□□□□□ -0.85
COPB2-203ENST00000503326 DMRT2Q9Y5R5 561 aa9.71□□□□□ -0.86
COPB2-203ENST00000503326 CACNB1Q02641 598 aaPredicted RBP9.54□□□□□ -0.88
COPB2-203ENST00000503326 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
COPB2-203ENST00000503326 DNAJC5BQ9UF47 199 aa9.52□□□□□ -0.89
COPB2-203ENST00000503326 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
COPB2-203ENST00000503326 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
COPB2-203ENST00000503326 RNF39Q9H2S5 420 aa9.27□□□□□ -0.93
COPB2-203ENST00000503326 HOXD11P31277 338 aaPredicted RBP9.23□□□□□ -0.93
COPB2-203ENST00000503326 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
COPB2-203ENST00000503326 C1QBPQ07021 282 aaKnown RBP9.09□□□□□ -0.95
COPB2-203ENST00000503326 RB1CC1Q8TDY2 1594 aa9.08□□□□□ -0.96
COPB2-203ENST00000503326 CNKSR2Q8WXI2 1034 aa9.07□□□□□ -0.96
COPB2-203ENST00000503326 RNF216Q9NWF9 866 aaPredicted RBP9.06□□□□□ -0.96
COPB2-203ENST00000503326 UNC13AQ9UPW8 1703 aa9.05□□□□□ -0.96
COPB2-203ENST00000503326 DNAJC5Q9H3Z4 198 aa9.01□□□□□ -0.97
COPB2-203ENST00000503326 EHMT2Q96KQ7 1210 aa8.98□□□□□ -0.97
COPB2-203ENST00000503326 PABPN1Q86U42 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
COPB2-203ENST00000503326 BICRAQ9NZM4 1560 aa8.91□□□□□ -0.98
COPB2-203ENST00000503326 NACADO15069 1562 aa8.89□□□□□ -0.99
COPB2-203ENST00000503326 KCNA4P22459 653 aa8.88□□□□□ -0.99
COPB2-203ENST00000503326 CC2D2AQ9P2K1 1620 aa8.83□□□□□ -1
COPB2-203ENST00000503326 CECR2Q9BXF3 1484 aa8.81□□□□□ -1
COPB2-203ENST00000503326 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.79□□□□□ -16e-8■■□□□ 11.9
COPB2-203ENST00000503326 NCBP3Q53F19 620 aaKnown RBP8.7□□□□□ -1.02
COPB2-203ENST00000503326 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
COPB2-203ENST00000503326 POTEHQ6S545 545 aa8.68□□□□□ -1.02
COPB2-203ENST00000503326 SLC4A1APQ9BWU0 796 aaKnown RBP8.65□□□□□ -1.02
COPB2-203ENST00000503326 SHROOM4Q9ULL8 1493 aa8.64□□□□□ -1.03
COPB2-203ENST00000503326 NPM3O75607 178 aaKnown RBP8.62□□□□□ -1.03
COPB2-203ENST00000503326 DCAF8L2P0C7V8 631 aa8.62□□□□□ -1.03
COPB2-203ENST00000503326 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
COPB2-203ENST00000503326 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
COPB2-203ENST00000503326 DSG3P32926 999 aa8.58□□□□□ -1.04
COPB2-203ENST00000503326 CSRNP3Q8WYN3 585 aa8.58□□□□□ -1.04
COPB2-203ENST00000503326 SPINK5Q9NQ38 1064 aaPredicted RBP8.58□□□□□ -1.04
COPB2-203ENST00000503326 CUX2O14529 1486 aa8.57□□□□□ -1.04
COPB2-203ENST00000503326 CAPN15O75808 1086 aa8.55□□□□□ -1.04
COPB2-203ENST00000503326 SCRIBQ14160 1630 aa8.52□□□□□ -1.05
COPB2-203ENST00000503326 TRIM41Q8WV44 630 aa8.44□□□□□ -1.06
COPB2-203ENST00000503326 ERCC6Q03468 1493 aa8.41□□□□□ -1.06
COPB2-203ENST00000503326 THOC2Q8NI27 1593 aaKnown RBP8.35□□□□□ -1.07
COPB2-203ENST00000503326 ABCB7O75027 752 aa8.35□□□□□ -1.07
COPB2-203ENST00000503326 TRHP20396 242 aaPredicted RBP8.35□□□□□ -1.07
COPB2-203ENST00000503326 SLC4A2P04920 1241 aa8.34□□□□□ -1.07
COPB2-203ENST00000503326 ZCCHC6Q5VYS8 1495 aaKnown RBP8.33□□□□□ -1.08
COPB2-203ENST00000503326 DCAF1Q9Y4B6 1507 aa8.33□□□□□ -1.08
COPB2-203ENST00000503326 NESP48681 1621 aa8.29□□□□□ -1.08
COPB2-203ENST00000503326 SLC24A1O60721 1099 aa8.28□□□□□ -1.08
COPB2-203ENST00000503326 ZNF219Q9P2Y4 722 aaPredicted RBP8.27□□□□□ -1.09
COPB2-203ENST00000503326 KIF21AQ7Z4S6 1674 aa8.25□□□□□ -1.09
COPB2-203ENST00000503326 APLP2Q06481 763 aa8.24□□□□□ -1.09
COPB2-203ENST00000503326 SMARCA2P51531 1590 aa8.22□□□□□ -1.09
COPB2-203ENST00000503326 BAZ1AQ9NRL2 1556 aaPredicted RBP8.19□□□□□ -1.1
COPB2-203ENST00000503326 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
COPB2-203ENST00000503326 NCAPD3P42695 1498 aa8.18□□□□□ -1.1
COPB2-203ENST00000503326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.16□□□□□ -1.1
COPB2-203ENST00000503326 HNRNPUL2Q1KMD3 747 aaKnown RBP8.16□□□□□ -1.1
COPB2-203ENST00000503326 HMGXB3Q12766 1538 aa8.14□□□□□ -1.11
COPB2-203ENST00000503326 RBM42Q9BTD8 480 aaKnown RBP8.14□□□□□ -1.11
COPB2-203ENST00000503326 CHRDL2Q6WN34 429 aa8.13□□□□□ -1.11
COPB2-203ENST00000503326 RIMBP3CA6NJZ7 1639 aa8.13□□□□□ -1.11
COPB2-203ENST00000503326 RIMBP3BA6NNM3 1639 aa8.13□□□□□ -1.11
COPB2-203ENST00000503326 RIMBP3Q9UFD9 1639 aa8.13□□□□□ -1.11
COPB2-203ENST00000503326 LAMC3Q9Y6N6 1575 aa8.13□□□□□ -1.11
COPB2-203ENST00000503326 SAMD1Q6SPF0 538 aaPredicted RBP8.12□□□□□ -1.11
COPB2-203ENST00000503326 ZBTB22O15209 634 aa8.11□□□□□ -1.11
COPB2-203ENST00000503326 FOXD4L1Q9NU39 408 aa8.11□□□□□ -1.11
COPB2-203ENST00000503326 ATAD2BQ9ULI0 1458 aa8.11□□□□□ -1.11
COPB2-203ENST00000503326 WDR62O43379 1518 aa8.07□□□□□ -1.12
COPB2-203ENST00000503326 SMARCA4P51532 1647 aa8.07□□□□□ -1.12
COPB2-203ENST00000503326 POLA2Q14181 598 aa8.05□□□□□ -1.12
COPB2-203ENST00000503326 RTN4Q9NQC3 1192 aaKnown RBP8.04□□□□□ -1.12
COPB2-203ENST00000503326 MRC2Q9UBG0 1479 aa8.03□□□□□ -1.12
COPB2-203ENST00000503326 BAZ1BQ9UIG0 1483 aaKnown RBP8.02□□□□□ -1.13
COPB2-203ENST00000503326 ARHGEF11O15085 1522 aa8.01□□□□□ -1.13
COPB2-203ENST00000503326 PDS5BQ9NTI5 1447 aa8□□□□□ -1.13
COPB2-203ENST00000503326 OSCARQ8IYS5 282 aa7.99□□□□□ -1.13
COPB2-203ENST00000503326 SP7Q8TDD2 431 aaPredicted RBP7.99□□□□□ -1.13
COPB2-203ENST00000503326 PEG3Q9GZU2 1588 aa7.97□□□□□ -1.13
COPB2-203ENST00000503326 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
COPB2-203ENST00000503326 AKT1S1Q96B36 256 aa7.92□□□□□ -1.14
COPB2-203ENST00000503326 ARAP1Q96P48 1450 aa7.91□□□□□ -1.14
COPB2-203ENST00000503326 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
COPB2-203ENST00000503326 CHD1O14646 1710 aa7.89□□□□□ -1.15
COPB2-203ENST00000503326 PIP4P2Q8N4L2 257 aa7.89□□□□□ -1.15
COPB2-203ENST00000503326 CADPSQ9ULU8 1353 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms