RNA–Protein interactions for RNA: ENST00000502643.5

LEMD2-204, Transcript of LEM domain containing 2, humanhuman

TSL 4

Gene LEMD2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-204ENST00000502643 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
LEMD2-204ENST00000502643 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
LEMD2-204ENST00000502643 ABCC9O60706 1549 aa26.45■■□□□ 1.83
LEMD2-204ENST00000502643 RB1CC1Q8TDY2 1594 aa25.21■■□□□ 1.63
LEMD2-204ENST00000502643 NACADO15069 1562 aa25.05■■□□□ 1.6
LEMD2-204ENST00000502643 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
LEMD2-204ENST00000502643 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
LEMD2-204ENST00000502643 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
LEMD2-204ENST00000502643 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
LEMD2-204ENST00000502643 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
LEMD2-204ENST00000502643 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
LEMD2-204ENST00000502643 ZCCHC6Q5VYS8 1495 aaKnown RBP24.48■■□□□ 1.51
LEMD2-204ENST00000502643 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
LEMD2-204ENST00000502643 SHROOM4Q9ULL8 1493 aa24.2■■□□□ 1.47
LEMD2-204ENST00000502643 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
LEMD2-204ENST00000502643 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
LEMD2-204ENST00000502643 EIF4G1Q04637 1599 aaKnown RBP23.89■■□□□ 1.41
LEMD2-204ENST00000502643 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
LEMD2-204ENST00000502643 NCAPD3P42695 1498 aa23.13■■□□□ 1.29
LEMD2-204ENST00000502643 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
LEMD2-204ENST00000502643 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
LEMD2-204ENST00000502643 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
LEMD2-204ENST00000502643 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
LEMD2-204ENST00000502643 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
LEMD2-204ENST00000502643 CUX2O14529 1486 aa22.85■■□□□ 1.25
LEMD2-204ENST00000502643 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
LEMD2-204ENST00000502643 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
LEMD2-204ENST00000502643 DNAJC5Q9H3Z4 198 aa22.81■■□□□ 1.24
LEMD2-204ENST00000502643 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
LEMD2-204ENST00000502643 NESP48681 1621 aa22.75■■□□□ 1.23
LEMD2-204ENST00000502643 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
LEMD2-204ENST00000502643 LAMC3Q9Y6N6 1575 aa22.6■■□□□ 1.21
LEMD2-204ENST00000502643 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
LEMD2-204ENST00000502643 WIZO95785 1651 aa22.46■■□□□ 1.19
LEMD2-204ENST00000502643 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
LEMD2-204ENST00000502643 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
LEMD2-204ENST00000502643 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
LEMD2-204ENST00000502643 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
LEMD2-204ENST00000502643 MRC2Q9UBG0 1479 aa22.27■■□□□ 1.16
LEMD2-204ENST00000502643 WDR62O43379 1518 aa22.23■■□□□ 1.15
LEMD2-204ENST00000502643 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
LEMD2-204ENST00000502643 CFTRP13569 1480 aa22.17■■□□□ 1.14
LEMD2-204ENST00000502643 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
LEMD2-204ENST00000502643 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
LEMD2-204ENST00000502643 URB2Q14146 1524 aaKnown RBP21.98■■□□□ 1.11
LEMD2-204ENST00000502643 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
LEMD2-204ENST00000502643 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
LEMD2-204ENST00000502643 OSCARQ8IYS5 282 aa21.74■■□□□ 1.07
LEMD2-204ENST00000502643 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
LEMD2-204ENST00000502643 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
LEMD2-204ENST00000502643 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
LEMD2-204ENST00000502643 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.07
LEMD2-204ENST00000502643 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
LEMD2-204ENST00000502643 DNMBPQ6XZF7 1577 aa21.66■■□□□ 1.06
LEMD2-204ENST00000502643 EIF4G3O43432 1585 aaKnown RBP21.59■■□□□ 1.05
LEMD2-204ENST00000502643 TARBP1Q13395 1621 aaKnown RBP21.56■■□□□ 1.04
LEMD2-204ENST00000502643 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
LEMD2-204ENST00000502643 RIMBP3CA6NJZ7 1639 aa21.51■■□□□ 1.03
LEMD2-204ENST00000502643 RIMBP3BA6NNM3 1639 aa21.51■■□□□ 1.03
LEMD2-204ENST00000502643 RIMBP3Q9UFD9 1639 aa21.51■■□□□ 1.03
LEMD2-204ENST00000502643 AQRO60306 1485 aaKnown RBP eCLIP21.48■■□□□ 1.033e-7■■■■■ 30.5
LEMD2-204ENST00000502643 ARHGEF11O15085 1522 aa21.44■■□□□ 1.02
LEMD2-204ENST00000502643 CHD1O14646 1710 aa21.42■■□□□ 1.02
LEMD2-204ENST00000502643 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
LEMD2-204ENST00000502643 SOGA1O94964 1423 aa21.38■■□□□ 1.01
LEMD2-204ENST00000502643 CUX1P39880 1505 aa21.37■■□□□ 1.01
LEMD2-204ENST00000502643 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
LEMD2-204ENST00000502643 WDR97A6NE52 1622 aa21.37■■□□□ 1.01
LEMD2-204ENST00000502643 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
LEMD2-204ENST00000502643 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
LEMD2-204ENST00000502643 FBLN2P98095 1184 aa21.27■■□□□ 1
LEMD2-204ENST00000502643 ARAP1Q96P48 1450 aa21.24■□□□□ 0.99
LEMD2-204ENST00000502643 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
LEMD2-204ENST00000502643 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
LEMD2-204ENST00000502643 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
LEMD2-204ENST00000502643 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
LEMD2-204ENST00000502643 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
LEMD2-204ENST00000502643 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
LEMD2-204ENST00000502643 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
LEMD2-204ENST00000502643 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
LEMD2-204ENST00000502643 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
LEMD2-204ENST00000502643 ABCA10Q8WWZ4 1543 aa21.14■□□□□ 0.98
LEMD2-204ENST00000502643 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
LEMD2-204ENST00000502643 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
LEMD2-204ENST00000502643 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
LEMD2-204ENST00000502643 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
LEMD2-204ENST00000502643 TOP2BQ02880 1626 aa21.03■□□□□ 0.96
LEMD2-204ENST00000502643 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
LEMD2-204ENST00000502643 GRIN2AQ12879 1464 aa20.95■□□□□ 0.94
LEMD2-204ENST00000502643 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
LEMD2-204ENST00000502643 NUP160Q12769 1436 aa20.91■□□□□ 0.94
LEMD2-204ENST00000502643 CEP170Q5SW79 1584 aa20.89■□□□□ 0.94
LEMD2-204ENST00000502643 FHAD1B1AJZ9 1412 aa20.88■□□□□ 0.93
LEMD2-204ENST00000502643 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
LEMD2-204ENST00000502643 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
LEMD2-204ENST00000502643 SHROOM2Q13796 1616 aa20.82■□□□□ 0.92
LEMD2-204ENST00000502643 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
LEMD2-204ENST00000502643 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
LEMD2-204ENST00000502643 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
LEMD2-204ENST00000502643 IGF1RP08069 1367 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms