RNA–Protein interactions for RNA: ENST00000502423.5

NDUFS4-202, Transcript of NADH:ubiquinone oxidoreductase subunit S4, humanhuman

TSL 5

Gene NDUFS4, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4-202ENST00000502423 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
NDUFS4-202ENST00000502423 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
NDUFS4-202ENST00000502423 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
NDUFS4-202ENST00000502423 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
NDUFS4-202ENST00000502423 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
NDUFS4-202ENST00000502423 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
NDUFS4-202ENST00000502423 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
NDUFS4-202ENST00000502423 ABCC9O60706 1549 aa20.27■□□□□ 0.83
NDUFS4-202ENST00000502423 FOXD1Q16676 465 aa19.96■□□□□ 0.79
NDUFS4-202ENST00000502423 ADRA2BP18089 450 aa19.65■□□□□ 0.74
NDUFS4-202ENST00000502423 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
NDUFS4-202ENST00000502423 DCAF8L2P0C7V8 631 aa19.48■□□□□ 0.71
NDUFS4-202ENST00000502423 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
NDUFS4-202ENST00000502423 NACADO15069 1562 aa19.4■□□□□ 0.7
NDUFS4-202ENST00000502423 MYO15BQ96JP2 1530 aa19.23■□□□□ 0.67
NDUFS4-202ENST00000502423 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
NDUFS4-202ENST00000502423 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
NDUFS4-202ENST00000502423 PIAS4Q8N2W9 510 aaPredicted RBP19■□□□□ 0.63
NDUFS4-202ENST00000502423 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
NDUFS4-202ENST00000502423 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
NDUFS4-202ENST00000502423 KCNA4P22459 653 aa18.83■□□□□ 0.6
NDUFS4-202ENST00000502423 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
NDUFS4-202ENST00000502423 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
NDUFS4-202ENST00000502423 SCRIBQ14160 1630 aa18.77■□□□□ 0.6
NDUFS4-202ENST00000502423 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
NDUFS4-202ENST00000502423 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
NDUFS4-202ENST00000502423 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
NDUFS4-202ENST00000502423 EIF4G1Q04637 1599 aaKnown RBP18.35■□□□□ 0.53
NDUFS4-202ENST00000502423 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
NDUFS4-202ENST00000502423 MSH5O43196 834 aa18.3■□□□□ 0.52
NDUFS4-202ENST00000502423 CECR2Q9BXF3 1484 aa18.22■□□□□ 0.51
NDUFS4-202ENST00000502423 EHMT2Q96KQ7 1210 aa18.19■□□□□ 0.5
NDUFS4-202ENST00000502423 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
NDUFS4-202ENST00000502423 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
NDUFS4-202ENST00000502423 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
NDUFS4-202ENST00000502423 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
NDUFS4-202ENST00000502423 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
NDUFS4-202ENST00000502423 BAZ1AQ9NRL2 1556 aaPredicted RBP17.93■□□□□ 0.46
NDUFS4-202ENST00000502423 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
NDUFS4-202ENST00000502423 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
NDUFS4-202ENST00000502423 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
NDUFS4-202ENST00000502423 MROH2BQ7Z745 1585 aa17.82■□□□□ 0.44
NDUFS4-202ENST00000502423 HMGXB3Q12766 1538 aa17.77■□□□□ 0.44
NDUFS4-202ENST00000502423 PEG3Q9GZU2 1588 aa17.76■□□□□ 0.43
NDUFS4-202ENST00000502423 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
NDUFS4-202ENST00000502423 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
NDUFS4-202ENST00000502423 WIZO95785 1651 aa17.61■□□□□ 0.41
NDUFS4-202ENST00000502423 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
NDUFS4-202ENST00000502423 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
NDUFS4-202ENST00000502423 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
NDUFS4-202ENST00000502423 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
NDUFS4-202ENST00000502423 NESP48681 1621 aa17.49■□□□□ 0.39
NDUFS4-202ENST00000502423 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
NDUFS4-202ENST00000502423 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
NDUFS4-202ENST00000502423 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
NDUFS4-202ENST00000502423 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
NDUFS4-202ENST00000502423 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
NDUFS4-202ENST00000502423 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
NDUFS4-202ENST00000502423 ZBTB22O15209 634 aa17.31■□□□□ 0.36
NDUFS4-202ENST00000502423 CUX2O14529 1486 aa17.31■□□□□ 0.36
NDUFS4-202ENST00000502423 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
NDUFS4-202ENST00000502423 CFTRP13569 1480 aa17.25■□□□□ 0.35
NDUFS4-202ENST00000502423 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
NDUFS4-202ENST00000502423 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
NDUFS4-202ENST00000502423 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
NDUFS4-202ENST00000502423 THOC2Q8NI27 1593 aaKnown RBP17.21■□□□□ 0.35
NDUFS4-202ENST00000502423 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
NDUFS4-202ENST00000502423 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
NDUFS4-202ENST00000502423 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
NDUFS4-202ENST00000502423 MRC2Q9UBG0 1479 aa17.16■□□□□ 0.34
NDUFS4-202ENST00000502423 WDR62O43379 1518 aa17.08■□□□□ 0.32
NDUFS4-202ENST00000502423 PRDM2Q13029 1718 aa17.05■□□□□ 0.32
NDUFS4-202ENST00000502423 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
NDUFS4-202ENST00000502423 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
NDUFS4-202ENST00000502423 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
NDUFS4-202ENST00000502423 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
NDUFS4-202ENST00000502423 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
NDUFS4-202ENST00000502423 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
NDUFS4-202ENST00000502423 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
NDUFS4-202ENST00000502423 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
NDUFS4-202ENST00000502423 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
NDUFS4-202ENST00000502423 CUX1P39880 1505 aa16.71■□□□□ 0.27
NDUFS4-202ENST00000502423 SOGA1O94964 1423 aa16.7■□□□□ 0.26
NDUFS4-202ENST00000502423 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
NDUFS4-202ENST00000502423 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
NDUFS4-202ENST00000502423 TARBP1Q13395 1621 aaKnown RBP16.68■□□□□ 0.26
NDUFS4-202ENST00000502423 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
NDUFS4-202ENST00000502423 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
NDUFS4-202ENST00000502423 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
NDUFS4-202ENST00000502423 EIF4G3O43432 1585 aaKnown RBP16.64■□□□□ 0.25
NDUFS4-202ENST00000502423 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
NDUFS4-202ENST00000502423 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
NDUFS4-202ENST00000502423 TRIM41Q8WV44 630 aa16.55■□□□□ 0.24
NDUFS4-202ENST00000502423 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
NDUFS4-202ENST00000502423 TOP2BQ02880 1626 aa16.54■□□□□ 0.24
NDUFS4-202ENST00000502423 FBLN2P98095 1184 aa16.53■□□□□ 0.24
NDUFS4-202ENST00000502423 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
NDUFS4-202ENST00000502423 SYNJ1O43426 1573 aa16.52■□□□□ 0.24
NDUFS4-202ENST00000502423 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
NDUFS4-202ENST00000502423 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms