RNA–Protein interactions for RNA: ENST00000502350.5

SH3TC1-204, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 2,258 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-204ENST00000502350 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
SH3TC1-204ENST00000502350 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
SH3TC1-204ENST00000502350 ABCC9O60706 1549 aa26.49■■□□□ 1.83
SH3TC1-204ENST00000502350 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
SH3TC1-204ENST00000502350 DCAF8L2P0C7V8 631 aa26.12■■□□□ 1.77
SH3TC1-204ENST00000502350 DCAF1Q9Y4B6 1507 aa25.99■■□□□ 1.75
SH3TC1-204ENST00000502350 NACADO15069 1562 aa25.82■■□□□ 1.72
SH3TC1-204ENST00000502350 MYO15BQ96JP2 1530 aa25.82■■□□□ 1.72
SH3TC1-204ENST00000502350 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
SH3TC1-204ENST00000502350 SHROOM4Q9ULL8 1493 aa25.43■■□□□ 1.66
SH3TC1-204ENST00000502350 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
SH3TC1-204ENST00000502350 UNC13AQ9UPW8 1703 aa25.26■■□□□ 1.63
SH3TC1-204ENST00000502350 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
SH3TC1-204ENST00000502350 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
SH3TC1-204ENST00000502350 CECR2Q9BXF3 1484 aa24.48■■□□□ 1.51
SH3TC1-204ENST00000502350 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
SH3TC1-204ENST00000502350 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
SH3TC1-204ENST00000502350 SMARCA4P51532 1647 aa24.31■■□□□ 1.48
SH3TC1-204ENST00000502350 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
SH3TC1-204ENST00000502350 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
SH3TC1-204ENST00000502350 EIF4G1Q04637 1599 aaKnown RBP24.23■■□□□ 1.47
SH3TC1-204ENST00000502350 WIZO95785 1651 aa24.13■■□□□ 1.45
SH3TC1-204ENST00000502350 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
SH3TC1-204ENST00000502350 CC2D2AQ9P2K1 1620 aa23.98■■□□□ 1.43
SH3TC1-204ENST00000502350 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
SH3TC1-204ENST00000502350 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
SH3TC1-204ENST00000502350 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
SH3TC1-204ENST00000502350 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.41
SH3TC1-204ENST00000502350 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
SH3TC1-204ENST00000502350 HMGXB3Q12766 1538 aa23.78■■□□□ 1.4
SH3TC1-204ENST00000502350 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
SH3TC1-204ENST00000502350 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
SH3TC1-204ENST00000502350 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
SH3TC1-204ENST00000502350 CFTRP13569 1480 aa23.17■■□□□ 1.3
SH3TC1-204ENST00000502350 CADPSQ9ULU8 1353 aa23.16■■□□□ 1.3
SH3TC1-204ENST00000502350 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
SH3TC1-204ENST00000502350 NESP48681 1621 aa23.13■■□□□ 1.29
SH3TC1-204ENST00000502350 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
SH3TC1-204ENST00000502350 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
SH3TC1-204ENST00000502350 ABCC8Q09428 1581 aa23■■□□□ 1.27
SH3TC1-204ENST00000502350 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
SH3TC1-204ENST00000502350 KIF21AQ7Z4S6 1674 aa22.92■■□□□ 1.26
SH3TC1-204ENST00000502350 PDS5BQ9NTI5 1447 aa22.9■■□□□ 1.26
SH3TC1-204ENST00000502350 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
SH3TC1-204ENST00000502350 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
SH3TC1-204ENST00000502350 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
SH3TC1-204ENST00000502350 PCGF6Q9BYE7 350 aa22.83■■□□□ 1.24
SH3TC1-204ENST00000502350 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
SH3TC1-204ENST00000502350 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
SH3TC1-204ENST00000502350 CUX1P39880 1505 aa22.75■■□□□ 1.23
SH3TC1-204ENST00000502350 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
SH3TC1-204ENST00000502350 BIVM-ERCC5R4GMW8 1640 aa22.73■■□□□ 1.23
SH3TC1-204ENST00000502350 HRCP23327 699 aa22.73■■□□□ 1.23
SH3TC1-204ENST00000502350 DNMBPQ6XZF7 1577 aa22.68■■□□□ 1.22
SH3TC1-204ENST00000502350 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
SH3TC1-204ENST00000502350 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
SH3TC1-204ENST00000502350 TOPBP1Q92547 1522 aa22.66■■□□□ 1.22
SH3TC1-204ENST00000502350 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
SH3TC1-204ENST00000502350 THOC2Q8NI27 1593 aaKnown RBP22.61■■□□□ 1.21
SH3TC1-204ENST00000502350 FGD5Q6ZNL6 1462 aa22.58■■□□□ 1.2
SH3TC1-204ENST00000502350 WDR62O43379 1518 aa22.56■■□□□ 1.2
SH3TC1-204ENST00000502350 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
SH3TC1-204ENST00000502350 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
SH3TC1-204ENST00000502350 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
SH3TC1-204ENST00000502350 SOGA1O94964 1423 aa22.43■■□□□ 1.18
SH3TC1-204ENST00000502350 TRIM26Q12899 539 aaPredicted RBP22.42■■□□□ 1.18
SH3TC1-204ENST00000502350 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
SH3TC1-204ENST00000502350 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
SH3TC1-204ENST00000502350 CUX2O14529 1486 aa22.37■■□□□ 1.17
SH3TC1-204ENST00000502350 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
SH3TC1-204ENST00000502350 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
SH3TC1-204ENST00000502350 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
SH3TC1-204ENST00000502350 IFT140Q96RY7 1462 aa22.3■■□□□ 1.16
SH3TC1-204ENST00000502350 KIF27Q86VH2 1401 aa22.3■■□□□ 1.16
SH3TC1-204ENST00000502350 EEA1Q15075 1411 aa22.28■■□□□ 1.16
SH3TC1-204ENST00000502350 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
SH3TC1-204ENST00000502350 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
SH3TC1-204ENST00000502350 ZNF608Q9ULD9 1512 aaPredicted RBP22.21■■□□□ 1.15
SH3TC1-204ENST00000502350 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
SH3TC1-204ENST00000502350 EIF4G3O43432 1585 aaKnown RBP22.18■■□□□ 1.14
SH3TC1-204ENST00000502350 GAPVD1Q14C86 1478 aa22.18■■□□□ 1.14
SH3TC1-204ENST00000502350 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
SH3TC1-204ENST00000502350 AQRO60306 1485 aaKnown RBP eCLIP22.17■■□□□ 1.149e-7■■■■■ 31.4
SH3TC1-204ENST00000502350 IGF1RP08069 1367 aa22.1■■□□□ 1.13
SH3TC1-204ENST00000502350 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
SH3TC1-204ENST00000502350 KIF21BO75037 1637 aa22.07■■□□□ 1.12
SH3TC1-204ENST00000502350 CUL7Q14999 1698 aa22.06■■□□□ 1.12
SH3TC1-204ENST00000502350 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
SH3TC1-204ENST00000502350 PRXQ9BXM0 1461 aa22.03■■□□□ 1.12
SH3TC1-204ENST00000502350 RAPGEF2Q9Y4G8 1499 aa22■■□□□ 1.11
SH3TC1-204ENST00000502350 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
SH3TC1-204ENST00000502350 GOLGA3Q08378 1498 aa22■■□□□ 1.11
SH3TC1-204ENST00000502350 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
SH3TC1-204ENST00000502350 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
SH3TC1-204ENST00000502350 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
SH3TC1-204ENST00000502350 FHAD1B1AJZ9 1412 aa21.91■■□□□ 1.1
SH3TC1-204ENST00000502350 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
SH3TC1-204ENST00000502350 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
SH3TC1-204ENST00000502350 CEP162Q5TB80 1403 aa21.83■■□□□ 1.08
SH3TC1-204ENST00000502350 ZEB1P37275 1124 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms