RNA–Protein interactions for RNA: ENST00000501541.1

AC087521.1-201, humanhuman

TSL 2 BASIC

Gene AC087521.1, Length 2,045 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087521.1-201ENST00000501541 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
AC087521.1-201ENST00000501541 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.91
AC087521.1-201ENST00000501541 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
AC087521.1-201ENST00000501541 ABCC9O60706 1549 aa25.66■■□□□ 1.7
AC087521.1-201ENST00000501541 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
AC087521.1-201ENST00000501541 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
AC087521.1-201ENST00000501541 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
AC087521.1-201ENST00000501541 NACADO15069 1562 aa25.2■■□□□ 1.62
AC087521.1-201ENST00000501541 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
AC087521.1-201ENST00000501541 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.59
AC087521.1-201ENST00000501541 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
AC087521.1-201ENST00000501541 UNC13AQ9UPW8 1703 aa24.53■■□□□ 1.52
AC087521.1-201ENST00000501541 BICRAQ9NZM4 1560 aa24.26■■□□□ 1.47
AC087521.1-201ENST00000501541 SUPT5HO00267 1087 aaKnown RBP24.22■■□□□ 1.47
AC087521.1-201ENST00000501541 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
AC087521.1-201ENST00000501541 HRCP23327 699 aa24.09■■□□□ 1.45
AC087521.1-201ENST00000501541 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
AC087521.1-201ENST00000501541 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
AC087521.1-201ENST00000501541 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.41
AC087521.1-201ENST00000501541 BAZ1AQ9NRL2 1556 aaPredicted RBP23.82■■□□□ 1.4
AC087521.1-201ENST00000501541 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
AC087521.1-201ENST00000501541 SMARCA4P51532 1647 aa23.74■■□□□ 1.39
AC087521.1-201ENST00000501541 WIZO95785 1651 aa23.6■■□□□ 1.37
AC087521.1-201ENST00000501541 PCGF6Q9BYE7 350 aa23.57■■□□□ 1.36
AC087521.1-201ENST00000501541 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
AC087521.1-201ENST00000501541 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
AC087521.1-201ENST00000501541 ATAD2BQ9ULI0 1458 aa23.4■■□□□ 1.34
AC087521.1-201ENST00000501541 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
AC087521.1-201ENST00000501541 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
AC087521.1-201ENST00000501541 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
AC087521.1-201ENST00000501541 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
AC087521.1-201ENST00000501541 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
AC087521.1-201ENST00000501541 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
AC087521.1-201ENST00000501541 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
AC087521.1-201ENST00000501541 HMGXB3Q12766 1538 aa23.19■■□□□ 1.3
AC087521.1-201ENST00000501541 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
AC087521.1-201ENST00000501541 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
AC087521.1-201ENST00000501541 ZEB1P37275 1124 aaPredicted RBP23.01■■□□□ 1.27
AC087521.1-201ENST00000501541 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
AC087521.1-201ENST00000501541 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
AC087521.1-201ENST00000501541 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
AC087521.1-201ENST00000501541 CFTRP13569 1480 aa22.66■■□□□ 1.22
AC087521.1-201ENST00000501541 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
AC087521.1-201ENST00000501541 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
AC087521.1-201ENST00000501541 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
AC087521.1-201ENST00000501541 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
AC087521.1-201ENST00000501541 NESP48681 1621 aa22.47■■□□□ 1.19
AC087521.1-201ENST00000501541 WRNQ14191 1432 aaPredicted RBP eCLIP22.43■■□□□ 1.18
AC087521.1-201ENST00000501541 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.17
AC087521.1-201ENST00000501541 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
AC087521.1-201ENST00000501541 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
AC087521.1-201ENST00000501541 PDS5BQ9NTI5 1447 aa22.32■■□□□ 1.16
AC087521.1-201ENST00000501541 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
AC087521.1-201ENST00000501541 TOP2BQ02880 1626 aa22.29■■□□□ 1.16
AC087521.1-201ENST00000501541 BIVM-ERCC5R4GMW8 1640 aa22.28■■□□□ 1.16
AC087521.1-201ENST00000501541 CUX1P39880 1505 aa22.27■■□□□ 1.16
AC087521.1-201ENST00000501541 CEP164Q9UPV0 1460 aa22.25■■□□□ 1.15
AC087521.1-201ENST00000501541 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
AC087521.1-201ENST00000501541 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.14
AC087521.1-201ENST00000501541 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
AC087521.1-201ENST00000501541 URB2Q14146 1524 aaKnown RBP22.1■■□□□ 1.13
AC087521.1-201ENST00000501541 ACIN1Q9UKV3 1341 aaKnown RBP22.1■■□□□ 1.13
AC087521.1-201ENST00000501541 SOGA1O94964 1423 aa22.08■■□□□ 1.12
AC087521.1-201ENST00000501541 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
AC087521.1-201ENST00000501541 EEA1Q15075 1411 aa22.03■■□□□ 1.12
AC087521.1-201ENST00000501541 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
AC087521.1-201ENST00000501541 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
AC087521.1-201ENST00000501541 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.12
AC087521.1-201ENST00000501541 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
AC087521.1-201ENST00000501541 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
AC087521.1-201ENST00000501541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
AC087521.1-201ENST00000501541 POLA1P09884 1462 aaPredicted RBP21.98■■□□□ 1.11
AC087521.1-201ENST00000501541 NEUROD1Q13562 356 aa21.94■■□□□ 1.1
AC087521.1-201ENST00000501541 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
AC087521.1-201ENST00000501541 WDR62O43379 1518 aa21.93■■□□□ 1.1
AC087521.1-201ENST00000501541 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
AC087521.1-201ENST00000501541 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
AC087521.1-201ENST00000501541 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
AC087521.1-201ENST00000501541 RAD54L2Q9Y4B4 1467 aa21.9■■□□□ 1.1
AC087521.1-201ENST00000501541 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
AC087521.1-201ENST00000501541 CUX2O14529 1486 aa21.87■■□□□ 1.09
AC087521.1-201ENST00000501541 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
AC087521.1-201ENST00000501541 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
AC087521.1-201ENST00000501541 MYT1Q01538 1121 aa21.83■■□□□ 1.09
AC087521.1-201ENST00000501541 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
AC087521.1-201ENST00000501541 CEP162Q5TB80 1403 aa21.8■■□□□ 1.08
AC087521.1-201ENST00000501541 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
AC087521.1-201ENST00000501541 KIF21BO75037 1637 aa21.75■■□□□ 1.07
AC087521.1-201ENST00000501541 GTF3C3Q9Y5Q9 886 aa21.75■■□□□ 1.07
AC087521.1-201ENST00000501541 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
AC087521.1-201ENST00000501541 IGF1RP08069 1367 aa21.73■■□□□ 1.07
AC087521.1-201ENST00000501541 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
AC087521.1-201ENST00000501541 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
AC087521.1-201ENST00000501541 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
AC087521.1-201ENST00000501541 PRXQ9BXM0 1461 aa21.69■■□□□ 1.06
AC087521.1-201ENST00000501541 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
AC087521.1-201ENST00000501541 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
AC087521.1-201ENST00000501541 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
AC087521.1-201ENST00000501541 ERICH3Q5RHP9 1530 aa21.64■■□□□ 1.05
AC087521.1-201ENST00000501541 RAPGEF2Q9Y4G8 1499 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms