RNA–Protein interactions for RNA: ENST00000498793.5

SCMH1-217, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-217ENST00000498793 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
SCMH1-217ENST00000498793 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
SCMH1-217ENST00000498793 ABCC9O60706 1549 aa25.02■■□□□ 1.6
SCMH1-217ENST00000498793 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
SCMH1-217ENST00000498793 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
SCMH1-217ENST00000498793 NACADO15069 1562 aa23.83■■□□□ 1.41
SCMH1-217ENST00000498793 ZCCHC6Q5VYS8 1495 aaKnown RBP23.8■■□□□ 1.4
SCMH1-217ENST00000498793 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
SCMH1-217ENST00000498793 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
SCMH1-217ENST00000498793 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
SCMH1-217ENST00000498793 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
SCMH1-217ENST00000498793 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
SCMH1-217ENST00000498793 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
SCMH1-217ENST00000498793 DNAJC5BQ9UF47 199 aa23.02■■□□□ 1.28
SCMH1-217ENST00000498793 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
SCMH1-217ENST00000498793 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
SCMH1-217ENST00000498793 CC2D2AQ9P2K1 1620 aa22.63■■□□□ 1.21
SCMH1-217ENST00000498793 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
SCMH1-217ENST00000498793 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
SCMH1-217ENST00000498793 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
SCMH1-217ENST00000498793 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
SCMH1-217ENST00000498793 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
SCMH1-217ENST00000498793 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
SCMH1-217ENST00000498793 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
SCMH1-217ENST00000498793 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
SCMH1-217ENST00000498793 WIZO95785 1651 aa21.91■■□□□ 1.1
SCMH1-217ENST00000498793 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
SCMH1-217ENST00000498793 BAZ1BQ9UIG0 1483 aaKnown RBP21.86■■□□□ 1.09
SCMH1-217ENST00000498793 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
SCMH1-217ENST00000498793 NESP48681 1621 aa21.68■■□□□ 1.06
SCMH1-217ENST00000498793 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
SCMH1-217ENST00000498793 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
SCMH1-217ENST00000498793 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
SCMH1-217ENST00000498793 LAMC3Q9Y6N6 1575 aa21.44■■□□□ 1.02
SCMH1-217ENST00000498793 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
SCMH1-217ENST00000498793 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
SCMH1-217ENST00000498793 CCDC88BA6NC98 1476 aa21.3■■□□□ 1
SCMH1-217ENST00000498793 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
SCMH1-217ENST00000498793 CFTRP13569 1480 aa21.22■□□□□ 0.99
SCMH1-217ENST00000498793 PDS5BQ9NTI5 1447 aa21.21■□□□□ 0.99
SCMH1-217ENST00000498793 CUX2O14529 1486 aa21.2■□□□□ 0.98
SCMH1-217ENST00000498793 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
SCMH1-217ENST00000498793 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
SCMH1-217ENST00000498793 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
SCMH1-217ENST00000498793 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
SCMH1-217ENST00000498793 WDR62O43379 1518 aa21.08■□□□□ 0.96
SCMH1-217ENST00000498793 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
SCMH1-217ENST00000498793 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
SCMH1-217ENST00000498793 DNMBPQ6XZF7 1577 aa20.81■□□□□ 0.92
SCMH1-217ENST00000498793 CUX1P39880 1505 aa20.73■□□□□ 0.91
SCMH1-217ENST00000498793 ZNF608Q9ULD9 1512 aaPredicted RBP20.72■□□□□ 0.91
SCMH1-217ENST00000498793 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
SCMH1-217ENST00000498793 POLA1P09884 1462 aaPredicted RBP20.67■□□□□ 0.9
SCMH1-217ENST00000498793 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.9
SCMH1-217ENST00000498793 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
SCMH1-217ENST00000498793 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
SCMH1-217ENST00000498793 RAD54L2Q9Y4B4 1467 aa20.63■□□□□ 0.89
SCMH1-217ENST00000498793 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
SCMH1-217ENST00000498793 DNAJC5Q9H3Z4 198 aa20.59■□□□□ 0.89
SCMH1-217ENST00000498793 SYNJ1O43426 1573 aa20.58■□□□□ 0.88
SCMH1-217ENST00000498793 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
SCMH1-217ENST00000498793 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.88
SCMH1-217ENST00000498793 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
SCMH1-217ENST00000498793 SOGA1O94964 1423 aa20.5■□□□□ 0.87
SCMH1-217ENST00000498793 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
SCMH1-217ENST00000498793 CHD1O14646 1710 aa20.47■□□□□ 0.87
SCMH1-217ENST00000498793 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
SCMH1-217ENST00000498793 WRNQ14191 1432 aaPredicted RBP eCLIP20.45■□□□□ 0.86
SCMH1-217ENST00000498793 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
SCMH1-217ENST00000498793 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
SCMH1-217ENST00000498793 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
SCMH1-217ENST00000498793 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
SCMH1-217ENST00000498793 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
SCMH1-217ENST00000498793 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
SCMH1-217ENST00000498793 FBLN2P98095 1184 aa20.22■□□□□ 0.83
SCMH1-217ENST00000498793 OSCARQ8IYS5 282 aa20.22■□□□□ 0.83
SCMH1-217ENST00000498793 MAGI1Q96QZ7 1491 aaPredicted RBP20.21■□□□□ 0.83
SCMH1-217ENST00000498793 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
SCMH1-217ENST00000498793 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
SCMH1-217ENST00000498793 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
SCMH1-217ENST00000498793 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
SCMH1-217ENST00000498793 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
SCMH1-217ENST00000498793 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
SCMH1-217ENST00000498793 ARHGEF11O15085 1522 aa20.1■□□□□ 0.81
SCMH1-217ENST00000498793 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
SCMH1-217ENST00000498793 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
SCMH1-217ENST00000498793 CEP170Q5SW79 1584 aa20.07■□□□□ 0.8
SCMH1-217ENST00000498793 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
SCMH1-217ENST00000498793 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
SCMH1-217ENST00000498793 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
SCMH1-217ENST00000498793 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
SCMH1-217ENST00000498793 ERCC6L2Q5T890 1561 aa19.97■□□□□ 0.79
SCMH1-217ENST00000498793 KIF27Q86VH2 1401 aa19.97■□□□□ 0.79
SCMH1-217ENST00000498793 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
SCMH1-217ENST00000498793 NUP160Q12769 1436 aa19.95■□□□□ 0.78
SCMH1-217ENST00000498793 CUL7Q14999 1698 aa19.95■□□□□ 0.78
SCMH1-217ENST00000498793 IGF1RP08069 1367 aa19.94■□□□□ 0.78
SCMH1-217ENST00000498793 SHROOM2Q13796 1616 aa19.89■□□□□ 0.77
SCMH1-217ENST00000498793 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.77
SCMH1-217ENST00000498793 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms