RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 NISCHQ9Y2I1 1504 aa41.56■■■■■ 4.24
MTA1-216ENST00000498644 CCDC180Q9P1Z9 1646 aa37.17■■■■□ 3.54
MTA1-216ENST00000498644 ABCC9O60706 1549 aa36.8■■■■□ 3.48
MTA1-216ENST00000498644 RB1CC1Q8TDY2 1594 aa35.22■■■■□ 3.23
MTA1-216ENST00000498644 NACADO15069 1562 aa35.07■■■■□ 3.2
MTA1-216ENST00000498644 DCAF8L2P0C7V8 631 aa34.92■■■■□ 3.18
MTA1-216ENST00000498644 MYO15BQ96JP2 1530 aa34.72■■■■□ 3.15
MTA1-216ENST00000498644 ZCCHC6Q5VYS8 1495 aaKnown RBP34.5■■■■□ 3.11
MTA1-216ENST00000498644 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
MTA1-216ENST00000498644 DCAF1Q9Y4B6 1507 aa34.39■■■■□ 3.1
MTA1-216ENST00000498644 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
MTA1-216ENST00000498644 DNAJC5BQ9UF47 199 aa34.24■■■■□ 3.07
MTA1-216ENST00000498644 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
MTA1-216ENST00000498644 SCRIBQ14160 1630 aa33.82■■■■□ 3.01
MTA1-216ENST00000498644 SHROOM4Q9ULL8 1493 aa33.78■■■■□ 3
MTA1-216ENST00000498644 EIF4G1Q04637 1599 aaKnown RBP33.29■■■□□ 2.92
MTA1-216ENST00000498644 CC2D2AQ9P2K1 1620 aa33.28■■■□□ 2.92
MTA1-216ENST00000498644 CECR2Q9BXF3 1484 aa33.13■■■□□ 2.89
MTA1-216ENST00000498644 NCAPD3P42695 1498 aa32.37■■■□□ 2.77
MTA1-216ENST00000498644 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
MTA1-216ENST00000498644 ATAD2BQ9ULI0 1458 aa32.3■■■□□ 2.76
MTA1-216ENST00000498644 BAZ1AQ9NRL2 1556 aaPredicted RBP32.25■■■□□ 2.75
MTA1-216ENST00000498644 SMARCA2P51531 1590 aa32.24■■■□□ 2.75
MTA1-216ENST00000498644 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
MTA1-216ENST00000498644 PEG3Q9GZU2 1588 aa32.06■■■□□ 2.72
MTA1-216ENST00000498644 MROH2BQ7Z745 1585 aa32■■■□□ 2.71
MTA1-216ENST00000498644 BAZ1BQ9UIG0 1483 aaKnown RBP31.99■■■□□ 2.71
MTA1-216ENST00000498644 ERCC6Q03468 1493 aa31.77■■■□□ 2.68
MTA1-216ENST00000498644 NESP48681 1621 aa31.69■■■□□ 2.66
MTA1-216ENST00000498644 CUX2O14529 1486 aa31.63■■■□□ 2.65
MTA1-216ENST00000498644 WIZO95785 1651 aa31.63■■■□□ 2.65
MTA1-216ENST00000498644 LAMC3Q9Y6N6 1575 aa31.59■■■□□ 2.65
MTA1-216ENST00000498644 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
MTA1-216ENST00000498644 PDS5BQ9NTI5 1447 aa31.41■■■□□ 2.62
MTA1-216ENST00000498644 CADPSQ9ULU8 1353 aa31.4■■■□□ 2.62
MTA1-216ENST00000498644 THOC2Q8NI27 1593 aaKnown RBP31.32■■■□□ 2.6
MTA1-216ENST00000498644 KIF21AQ7Z4S6 1674 aa31.31■■■□□ 2.6
MTA1-216ENST00000498644 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
MTA1-216ENST00000498644 DNAJC5Q9H3Z4 198 aa31.25■■■□□ 2.59
MTA1-216ENST00000498644 CFTRP13569 1480 aa31.1■■■□□ 2.57
MTA1-216ENST00000498644 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
MTA1-216ENST00000498644 CEP164Q9UPV0 1460 aa31.02■■■□□ 2.56
MTA1-216ENST00000498644 FANCD2Q9BXW9 1451 aa31.01■■■□□ 2.56
MTA1-216ENST00000498644 WDR62O43379 1518 aa30.99■■■□□ 2.55
MTA1-216ENST00000498644 CCDC88BA6NC98 1476 aa30.93■■■□□ 2.54
MTA1-216ENST00000498644 PRDM2Q13029 1718 aa30.82■■■□□ 2.52
MTA1-216ENST00000498644 URB2Q14146 1524 aaKnown RBP30.73■■■□□ 2.51
MTA1-216ENST00000498644 ABCC8Q09428 1581 aa30.48■■■□□ 2.47
MTA1-216ENST00000498644 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
MTA1-216ENST00000498644 IFT140Q96RY7 1462 aa30.4■■■□□ 2.46
MTA1-216ENST00000498644 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
MTA1-216ENST00000498644 SUPT5HO00267 1087 aaKnown RBP30.31■■■□□ 2.44
MTA1-216ENST00000498644 ZNF608Q9ULD9 1512 aaPredicted RBP30.28■■■□□ 2.44
MTA1-216ENST00000498644 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
MTA1-216ENST00000498644 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
MTA1-216ENST00000498644 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
MTA1-216ENST00000498644 EIF4G3O43432 1585 aaKnown RBP30.14■■■□□ 2.42
MTA1-216ENST00000498644 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.42e-9■■■□□ 18.8
MTA1-216ENST00000498644 SOGA1O94964 1423 aa30.07■■■□□ 2.4
MTA1-216ENST00000498644 CUX1P39880 1505 aa30.05■■■□□ 2.4
MTA1-216ENST00000498644 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
MTA1-216ENST00000498644 FGD5Q6ZNL6 1462 aa30.02■■■□□ 2.4
MTA1-216ENST00000498644 TRIM41Q8WV44 630 aa29.96■■■□□ 2.39
MTA1-216ENST00000498644 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
MTA1-216ENST00000498644 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
MTA1-216ENST00000498644 CHD1O14646 1710 aa29.85■■■□□ 2.37
MTA1-216ENST00000498644 FBLN2P98095 1184 aa29.81■■■□□ 2.36
MTA1-216ENST00000498644 RIMBP3CA6NJZ7 1639 aa29.78■■■□□ 2.36
MTA1-216ENST00000498644 RIMBP3BA6NNM3 1639 aa29.78■■■□□ 2.36
MTA1-216ENST00000498644 RIMBP3Q9UFD9 1639 aa29.78■■■□□ 2.36
MTA1-216ENST00000498644 GRIN2BQ13224 1484 aa29.76■■■□□ 2.35
MTA1-216ENST00000498644 SNAPC4Q5SXM2 1469 aa29.76■■■□□ 2.35
MTA1-216ENST00000498644 MAGI1Q96QZ7 1491 aaPredicted RBP29.74■■■□□ 2.35
MTA1-216ENST00000498644 ABCA10Q8WWZ4 1543 aa29.73■■■□□ 2.35
MTA1-216ENST00000498644 ARHGEF11O15085 1522 aa29.72■■■□□ 2.35
MTA1-216ENST00000498644 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
MTA1-216ENST00000498644 WRNQ14191 1432 aaPredicted RBP eCLIP29.69■■■□□ 2.34
MTA1-216ENST00000498644 TOP2BQ02880 1626 aa29.68■■■□□ 2.34
MTA1-216ENST00000498644 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
MTA1-216ENST00000498644 CHMP7Q8WUX9 453 aaPredicted RBP29.67■■■□□ 2.34
MTA1-216ENST00000498644 PBRM1Q86U86 1689 aa29.65■■■□□ 2.34
MTA1-216ENST00000498644 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
MTA1-216ENST00000498644 SYNJ2O15056 1496 aa29.62■■■□□ 2.33
MTA1-216ENST00000498644 SYNJ1O43426 1573 aa29.62■■■□□ 2.33
MTA1-216ENST00000498644 CLASP1Q7Z460 1538 aa29.53■■■□□ 2.32
MTA1-216ENST00000498644 CYB5RLQ6IPT4 315 aa29.5■■■□□ 2.31
MTA1-216ENST00000498644 ARAP1Q96P48 1450 aa29.44■■■□□ 2.3
MTA1-216ENST00000498644 ERICH3Q5RHP9 1530 aa29.37■■■□□ 2.29
MTA1-216ENST00000498644 ADAMTS12P58397 1594 aa29.37■■■□□ 2.29
MTA1-216ENST00000498644 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
MTA1-216ENST00000498644 FHAD1B1AJZ9 1412 aa29.34■■■□□ 2.29
MTA1-216ENST00000498644 NUP160Q12769 1436 aa29.26■■■□□ 2.27
MTA1-216ENST00000498644 CEP170Q5SW79 1584 aa29.22■■■□□ 2.27
MTA1-216ENST00000498644 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
MTA1-216ENST00000498644 SHROOM2Q13796 1616 aa29.09■■■□□ 2.25
MTA1-216ENST00000498644 IGF1RP08069 1367 aa29.08■■■□□ 2.25
MTA1-216ENST00000498644 ERCC6L2Q5T890 1561 aa29.06■■■□□ 2.24
MTA1-216ENST00000498644 TRHP20396 242 aaPredicted RBP29.05■■■□□ 2.24
MTA1-216ENST00000498644 CUL7Q14999 1698 aa29■■■□□ 2.23
MTA1-216ENST00000498644 JPH4Q96JJ6 628 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms