RNA–Protein interactions for RNA: ENST00000498298.1

SEC31B-213, Transcript of SEC31 homolog B, COPII coat complex component, humanhuman

TSL 3

Gene SEC31B, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31B-213ENST00000498298 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
SEC31B-213ENST00000498298 ABCC9O60706 1549 aa28.73■■■□□ 2.19
SEC31B-213ENST00000498298 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
SEC31B-213ENST00000498298 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
SEC31B-213ENST00000498298 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
SEC31B-213ENST00000498298 NACADO15069 1562 aa26.97■■□□□ 1.91
SEC31B-213ENST00000498298 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
SEC31B-213ENST00000498298 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
SEC31B-213ENST00000498298 UNC13AQ9UPW8 1703 aa26.55■■□□□ 1.84
SEC31B-213ENST00000498298 MYO15BQ96JP2 1530 aa26.54■■□□□ 1.84
SEC31B-213ENST00000498298 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
SEC31B-213ENST00000498298 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
SEC31B-213ENST00000498298 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.77
SEC31B-213ENST00000498298 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
SEC31B-213ENST00000498298 SCRIBQ14160 1630 aa25.94■■□□□ 1.74
SEC31B-213ENST00000498298 CC2D2AQ9P2K1 1620 aa25.9■■□□□ 1.74
SEC31B-213ENST00000498298 CECR2Q9BXF3 1484 aa25.88■■□□□ 1.73
SEC31B-213ENST00000498298 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
SEC31B-213ENST00000498298 DNAJC5Q9H3Z4 198 aa25.09■■□□□ 1.61
SEC31B-213ENST00000498298 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
SEC31B-213ENST00000498298 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
SEC31B-213ENST00000498298 CUX2O14529 1486 aa24.77■■□□□ 1.56
SEC31B-213ENST00000498298 ERCC6Q03468 1493 aa24.75■■□□□ 1.55
SEC31B-213ENST00000498298 SMARCA4P51532 1647 aa24.72■■□□□ 1.55
SEC31B-213ENST00000498298 SMARCA2P51531 1590 aa24.69■■□□□ 1.54
SEC31B-213ENST00000498298 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
SEC31B-213ENST00000498298 NESP48681 1621 aa24.64■■□□□ 1.54
SEC31B-213ENST00000498298 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
SEC31B-213ENST00000498298 BAZ1BQ9UIG0 1483 aaKnown RBP24.56■■□□□ 1.52
SEC31B-213ENST00000498298 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
SEC31B-213ENST00000498298 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
SEC31B-213ENST00000498298 THOC2Q8NI27 1593 aaKnown RBP24.35■■□□□ 1.49
SEC31B-213ENST00000498298 LAMC3Q9Y6N6 1575 aa24.35■■□□□ 1.49
SEC31B-213ENST00000498298 PDS5BQ9NTI5 1447 aa24.26■■□□□ 1.47
SEC31B-213ENST00000498298 KIF21AQ7Z4S6 1674 aa24.22■■□□□ 1.47
SEC31B-213ENST00000498298 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
SEC31B-213ENST00000498298 WIZO95785 1651 aa24.11■■□□□ 1.45
SEC31B-213ENST00000498298 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
SEC31B-213ENST00000498298 WDR62O43379 1518 aa23.98■■□□□ 1.43
SEC31B-213ENST00000498298 FANCD2Q9BXW9 1451 aa23.9■■□□□ 1.42
SEC31B-213ENST00000498298 CEP164Q9UPV0 1460 aa23.9■■□□□ 1.42
SEC31B-213ENST00000498298 RSF1Q96T23 1441 aaPredicted RBP23.9■■□□□ 1.42
SEC31B-213ENST00000498298 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
SEC31B-213ENST00000498298 CFTRP13569 1480 aa23.87■■□□□ 1.41
SEC31B-213ENST00000498298 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
SEC31B-213ENST00000498298 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
SEC31B-213ENST00000498298 OSCARQ8IYS5 282 aa23.7■■□□□ 1.38
SEC31B-213ENST00000498298 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
SEC31B-213ENST00000498298 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
SEC31B-213ENST00000498298 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
SEC31B-213ENST00000498298 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
SEC31B-213ENST00000498298 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
SEC31B-213ENST00000498298 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.33
SEC31B-213ENST00000498298 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.33
SEC31B-213ENST00000498298 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.33
SEC31B-213ENST00000498298 SUPT5HO00267 1087 aaKnown RBP23.33■■□□□ 1.33
SEC31B-213ENST00000498298 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
SEC31B-213ENST00000498298 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
SEC31B-213ENST00000498298 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
SEC31B-213ENST00000498298 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
SEC31B-213ENST00000498298 EIF4G3O43432 1585 aaKnown RBP23.25■■□□□ 1.31
SEC31B-213ENST00000498298 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
SEC31B-213ENST00000498298 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
SEC31B-213ENST00000498298 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
SEC31B-213ENST00000498298 RAD54L2Q9Y4B4 1467 aa23.14■■□□□ 1.29
SEC31B-213ENST00000498298 FBLN2P98095 1184 aa23.14■■□□□ 1.29
SEC31B-213ENST00000498298 SOGA1O94964 1423 aa23.1■■□□□ 1.29
SEC31B-213ENST00000498298 TDRD9Q8NDG6 1382 aaKnown RBP23.1■■□□□ 1.29
SEC31B-213ENST00000498298 CHD1O14646 1710 aa23.1■■□□□ 1.29
SEC31B-213ENST00000498298 ARAP1Q96P48 1450 aa23.03■■□□□ 1.28
SEC31B-213ENST00000498298 FGD5Q6ZNL6 1462 aa22.99■■□□□ 1.27
SEC31B-213ENST00000498298 CUX1P39880 1505 aa22.97■■□□□ 1.27
SEC31B-213ENST00000498298 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
SEC31B-213ENST00000498298 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
SEC31B-213ENST00000498298 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
SEC31B-213ENST00000498298 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
SEC31B-213ENST00000498298 CLASP1Q7Z460 1538 aa22.88■■□□□ 1.25
SEC31B-213ENST00000498298 GRIN2BQ13224 1484 aa22.87■■□□□ 1.25
SEC31B-213ENST00000498298 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
SEC31B-213ENST00000498298 SYNJ2O15056 1496 aa22.81■■□□□ 1.24
SEC31B-213ENST00000498298 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
SEC31B-213ENST00000498298 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
SEC31B-213ENST00000498298 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
SEC31B-213ENST00000498298 PBRM1Q86U86 1689 aa22.69■■□□□ 1.22
SEC31B-213ENST00000498298 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
SEC31B-213ENST00000498298 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
SEC31B-213ENST00000498298 GRIN2AQ12879 1464 aa22.58■■□□□ 1.2
SEC31B-213ENST00000498298 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
SEC31B-213ENST00000498298 NUP160Q12769 1436 aa22.53■■□□□ 1.2
SEC31B-213ENST00000498298 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
SEC31B-213ENST00000498298 TOP2BQ02880 1626 aa22.5■■□□□ 1.19
SEC31B-213ENST00000498298 ADAMTS12P58397 1594 aa22.5■■□□□ 1.19
SEC31B-213ENST00000498298 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
SEC31B-213ENST00000498298 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
SEC31B-213ENST00000498298 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
SEC31B-213ENST00000498298 SHROOM2Q13796 1616 aa22.4■■□□□ 1.18
SEC31B-213ENST00000498298 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
SEC31B-213ENST00000498298 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
SEC31B-213ENST00000498298 JPH4Q96JJ6 628 aa22.36■■□□□ 1.17
SEC31B-213ENST00000498298 PRG4Q92954 1404 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms