RNA–Protein interactions for RNA: ENST00000498154.5

FOXP1-217, Transcript of forkhead box P1, humanhuman

TSL 3

Gene FOXP1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-217ENST00000498154 NISCHQ9Y2I1 1504 aa60.29■■■■■ 7.24
FOXP1-217ENST00000498154 CCDC180Q9P1Z9 1646 aa53.85■■■■■ 6.21
FOXP1-217ENST00000498154 ABCC9O60706 1549 aa53.52■■■■■ 6.16
FOXP1-217ENST00000498154 RB1CC1Q8TDY2 1594 aa51.11■■■■■ 5.77
FOXP1-217ENST00000498154 DCAF8L2P0C7V8 631 aa50.91■■■■■ 5.74
FOXP1-217ENST00000498154 NACADO15069 1562 aa50.85■■■■■ 5.73
FOXP1-217ENST00000498154 MYO15BQ96JP2 1530 aa50.26■■■■■ 5.64
FOXP1-217ENST00000498154 ZCCHC6Q5VYS8 1495 aaKnown RBP50.02■■■■■ 5.6
FOXP1-217ENST00000498154 PABPN1Q86U42 306 aaKnown RBP eCLIP49.97■■■■■ 5.59
FOXP1-217ENST00000498154 UNC13AQ9UPW8 1703 aa49.91■■■■■ 5.58
FOXP1-217ENST00000498154 DNAJC5BQ9UF47 199 aa49.83■■■■■ 5.57
FOXP1-217ENST00000498154 DCAF1Q9Y4B6 1507 aa49.79■■■■■ 5.56
FOXP1-217ENST00000498154 BICRAQ9NZM4 1560 aa49.55■■■■■ 5.52
FOXP1-217ENST00000498154 SCRIBQ14160 1630 aa49.16■■■■■ 5.46
FOXP1-217ENST00000498154 SHROOM4Q9ULL8 1493 aa48.93■■■■■ 5.42
FOXP1-217ENST00000498154 CC2D2AQ9P2K1 1620 aa48.33■■■■■ 5.33
FOXP1-217ENST00000498154 EIF4G1Q04637 1599 aaKnown RBP48.33■■■■■ 5.33
FOXP1-217ENST00000498154 CECR2Q9BXF3 1484 aa48.16■■■■■ 5.3
FOXP1-217ENST00000498154 NCAPD3P42695 1498 aa46.95■■■■■ 5.11
FOXP1-217ENST00000498154 SMARCA4P51532 1647 aa46.91■■■■■ 5.1
FOXP1-217ENST00000498154 ATAD2BQ9ULI0 1458 aa46.88■■■■■ 5.09
FOXP1-217ENST00000498154 SMARCA2P51531 1590 aa46.77■■■■■ 5.08
FOXP1-217ENST00000498154 BAZ1AQ9NRL2 1556 aaPredicted RBP46.77■■■■■ 5.08
FOXP1-217ENST00000498154 HMGXB3Q12766 1538 aa46.61■■■■■ 5.05
FOXP1-217ENST00000498154 BAZ1BQ9UIG0 1483 aaKnown RBP46.47■■■■■ 5.03
FOXP1-217ENST00000498154 MROH2BQ7Z745 1585 aa46.46■■■■■ 5.03
FOXP1-217ENST00000498154 PEG3Q9GZU2 1588 aa46.42■■■■■ 5.02
FOXP1-217ENST00000498154 ERCC6Q03468 1493 aa46.21■■■■■ 4.99
FOXP1-217ENST00000498154 NESP48681 1621 aa46.09■■■■■ 4.97
FOXP1-217ENST00000498154 WIZO95785 1651 aa45.92■■■■■ 4.94
FOXP1-217ENST00000498154 CUX2O14529 1486 aa45.92■■■■■ 4.94
FOXP1-217ENST00000498154 LAMC3Q9Y6N6 1575 aa45.81■■■■■ 4.92
FOXP1-217ENST00000498154 RSF1Q96T23 1441 aaPredicted RBP45.68■■■■■ 4.9
FOXP1-217ENST00000498154 PDS5BQ9NTI5 1447 aa45.6■■■■■ 4.89
FOXP1-217ENST00000498154 CADPSQ9ULU8 1353 aa45.59■■■■■ 4.89
FOXP1-217ENST00000498154 KIF21AQ7Z4S6 1674 aa45.47■■■■■ 4.87
FOXP1-217ENST00000498154 DNAJC5Q9H3Z4 198 aa45.47■■■■■ 4.87
FOXP1-217ENST00000498154 THOC2Q8NI27 1593 aaKnown RBP45.46■■■■■ 4.87
FOXP1-217ENST00000498154 TOP2AP11388 1531 aaKnown RBP45.36■■■■■ 4.85
FOXP1-217ENST00000498154 MRC2Q9UBG0 1479 aa45.14■■■■■ 4.82
FOXP1-217ENST00000498154 CFTRP13569 1480 aa45.12■■■■■ 4.81
FOXP1-217ENST00000498154 CEP164Q9UPV0 1460 aa45.06■■■■■ 4.8
FOXP1-217ENST00000498154 FANCD2Q9BXW9 1451 aa45.05■■■■■ 4.8
FOXP1-217ENST00000498154 WDR62O43379 1518 aa44.96■■■■■ 4.79
FOXP1-217ENST00000498154 CCDC88BA6NC98 1476 aa44.89■■■■■ 4.78
FOXP1-217ENST00000498154 PRDM2Q13029 1718 aa44.66■■■■■ 4.74
FOXP1-217ENST00000498154 URB2Q14146 1524 aaKnown RBP44.62■■■■■ 4.73
FOXP1-217ENST00000498154 TOPBP1Q92547 1522 aa44.24■■■■■ 4.67
FOXP1-217ENST00000498154 ABCC8Q09428 1581 aa44.2■■■■■ 4.67
FOXP1-217ENST00000498154 IFT140Q96RY7 1462 aa44.15■■■■■ 4.66
FOXP1-217ENST00000498154 SUPT5HO00267 1087 aaKnown RBP44.13■■■■■ 4.66
FOXP1-217ENST00000498154 DNMBPQ6XZF7 1577 aa44.09■■■■■ 4.65
FOXP1-217ENST00000498154 OSCARQ8IYS5 282 aa44.02■■■■■ 4.64
FOXP1-217ENST00000498154 ZNF608Q9ULD9 1512 aaPredicted RBP44.02■■■■■ 4.64
FOXP1-217ENST00000498154 POLA1P09884 1462 aaPredicted RBP43.81■■■■■ 4.6
FOXP1-217ENST00000498154 TARBP1Q13395 1621 aaKnown RBP43.77■■■■■ 4.6
FOXP1-217ENST00000498154 EIF4G3O43432 1585 aaKnown RBP43.75■■■■■ 4.59
FOXP1-217ENST00000498154 TRIM41Q8WV44 630 aa43.72■■■■■ 4.59
FOXP1-217ENST00000498154 AQRO60306 1485 aaKnown RBP eCLIP43.71■■■■■ 4.593e-6■■■□□ 15.7
FOXP1-217ENST00000498154 SOGA1O94964 1423 aa43.68■■■■■ 4.58
FOXP1-217ENST00000498154 RAD54L2Q9Y4B4 1467 aa43.67■■■■■ 4.58
FOXP1-217ENST00000498154 CUX1P39880 1505 aa43.62■■■■■ 4.57
FOXP1-217ENST00000498154 FGD5Q6ZNL6 1462 aa43.6■■■■■ 4.57
FOXP1-217ENST00000498154 TDRD9Q8NDG6 1382 aaKnown RBP43.54■■■■■ 4.56
FOXP1-217ENST00000498154 FBLN2P98095 1184 aa43.45■■■■■ 4.55
FOXP1-217ENST00000498154 CHD1O14646 1710 aa43.37■■■■■ 4.53
FOXP1-217ENST00000498154 WDR97A6NE52 1622 aa43.35■■■■■ 4.53
FOXP1-217ENST00000498154 RIMBP3CA6NJZ7 1639 aa43.27■■■■■ 4.52
FOXP1-217ENST00000498154 RIMBP3BA6NNM3 1639 aa43.27■■■■■ 4.52
FOXP1-217ENST00000498154 RIMBP3Q9UFD9 1639 aa43.27■■■■■ 4.52
FOXP1-217ENST00000498154 SNAPC4Q5SXM2 1469 aa43.25■■■■■ 4.51
FOXP1-217ENST00000498154 GRIN2BQ13224 1484 aa43.22■■■■■ 4.51
FOXP1-217ENST00000498154 ARHGEF11O15085 1522 aa43.18■■■■■ 4.5
FOXP1-217ENST00000498154 CHMP7Q8WUX9 453 aaPredicted RBP43.18■■■■■ 4.5
FOXP1-217ENST00000498154 MAGI1Q96QZ7 1491 aaPredicted RBP43.15■■■■■ 4.5
FOXP1-217ENST00000498154 GAPVD1Q14C86 1478 aa43.13■■■■■ 4.5
FOXP1-217ENST00000498154 ABCA10Q8WWZ4 1543 aa43.12■■■■■ 4.49
FOXP1-217ENST00000498154 WRNQ14191 1432 aaPredicted RBP eCLIP43.11■■■■■ 4.49
FOXP1-217ENST00000498154 TOP2BQ02880 1626 aa43.04■■■■■ 4.48
FOXP1-217ENST00000498154 PBRM1Q86U86 1689 aa43.02■■■■■ 4.48
FOXP1-217ENST00000498154 BIVM-ERCC5R4GMW8 1640 aa43.01■■■■■ 4.48
FOXP1-217ENST00000498154 SYNJ2O15056 1496 aa43■■■■■ 4.47
FOXP1-217ENST00000498154 SYNJ1O43426 1573 aa42.99■■■■■ 4.47
FOXP1-217ENST00000498154 ABCA5Q8WWZ7 1642 aa42.97■■■■■ 4.47
FOXP1-217ENST00000498154 CYB5RLQ6IPT4 315 aa42.97■■■■■ 4.47
FOXP1-217ENST00000498154 CLASP1Q7Z460 1538 aa42.85■■■■■ 4.45
FOXP1-217ENST00000498154 ARAP1Q96P48 1450 aa42.79■■■■■ 4.44
FOXP1-217ENST00000498154 GRIN2AQ12879 1464 aa42.63■■■■■ 4.42
FOXP1-217ENST00000498154 ADAMTS12P58397 1594 aa42.63■■■■■ 4.41
FOXP1-217ENST00000498154 FHAD1B1AJZ9 1412 aa42.6■■■■■ 4.41
FOXP1-217ENST00000498154 ERICH3Q5RHP9 1530 aa42.59■■■■■ 4.41
FOXP1-217ENST00000498154 NUP160Q12769 1436 aa42.46■■■■■ 4.39
FOXP1-217ENST00000498154 CEP170Q5SW79 1584 aa42.44■■■■■ 4.38
FOXP1-217ENST00000498154 TRHP20396 242 aaPredicted RBP42.39■■■■■ 4.38
FOXP1-217ENST00000498154 KIF27Q86VH2 1401 aa42.28■■■■■ 4.36
FOXP1-217ENST00000498154 ERCC6L2Q5T890 1561 aa42.25■■■■■ 4.35
FOXP1-217ENST00000498154 IGF1RP08069 1367 aa42.21■■■■■ 4.35
FOXP1-217ENST00000498154 SHROOM2Q13796 1616 aa42.19■■■■■ 4.34
FOXP1-217ENST00000498154 JPH4Q96JJ6 628 aa42.15■■■■■ 4.34
FOXP1-217ENST00000498154 PRG4Q92954 1404 aaPredicted RBP42.08■■■■■ 4.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms