RNA–Protein interactions for RNA: ENST00000498083.1

FAM213B-214, Transcript of Prostamide/prostaglandin F synthase, humanhuman

APPRIS ALT2 TSL 3

Gene FAM213B, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213B-214ENST00000498083 NISCHQ9Y2I1 1504 aa54.66■■■■■ 6.34
FAM213B-214ENST00000498083 CCDC180Q9P1Z9 1646 aa48.78■■■■■ 5.4
FAM213B-214ENST00000498083 ABCC9O60706 1549 aa47.97■■■■■ 5.27
FAM213B-214ENST00000498083 RB1CC1Q8TDY2 1594 aa46.06■■■■■ 4.96
FAM213B-214ENST00000498083 DCAF8L2P0C7V8 631 aa45.96■■■■■ 4.95
FAM213B-214ENST00000498083 NACADO15069 1562 aa45.92■■■■■ 4.94
FAM213B-214ENST00000498083 MYO15BQ96JP2 1530 aa45.48■■■■■ 4.87
FAM213B-214ENST00000498083 ZCCHC6Q5VYS8 1495 aaKnown RBP45.44■■■■■ 4.87
FAM213B-214ENST00000498083 DCAF1Q9Y4B6 1507 aa45.2■■■■■ 4.83
FAM213B-214ENST00000498083 UNC13AQ9UPW8 1703 aa45.04■■■■■ 4.8
FAM213B-214ENST00000498083 PABPN1Q86U42 306 aaKnown RBP eCLIP44.79■■■■■ 4.76
FAM213B-214ENST00000498083 BICRAQ9NZM4 1560 aa44.57■■■■■ 4.73
FAM213B-214ENST00000498083 SCRIBQ14160 1630 aa44.48■■■■■ 4.71
FAM213B-214ENST00000498083 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
FAM213B-214ENST00000498083 SHROOM4Q9ULL8 1493 aa44.1■■■■■ 4.65
FAM213B-214ENST00000498083 EIF4G1Q04637 1599 aaKnown RBP43.47■■■■■ 4.55
FAM213B-214ENST00000498083 CC2D2AQ9P2K1 1620 aa43.39■■■■■ 4.54
FAM213B-214ENST00000498083 CECR2Q9BXF3 1484 aa43.13■■■■■ 4.5
FAM213B-214ENST00000498083 SMARCA4P51532 1647 aa42.5■■■■■ 4.39
FAM213B-214ENST00000498083 BAZ1AQ9NRL2 1556 aaPredicted RBP42.43■■■■■ 4.38
FAM213B-214ENST00000498083 NCAPD3P42695 1498 aa42.32■■■■■ 4.37
FAM213B-214ENST00000498083 ATAD2BQ9ULI0 1458 aa42.3■■■■■ 4.36
FAM213B-214ENST00000498083 SMARCA2P51531 1590 aa42.3■■■■■ 4.36
FAM213B-214ENST00000498083 MROH2BQ7Z745 1585 aa42.11■■■■■ 4.33
FAM213B-214ENST00000498083 HMGXB3Q12766 1538 aa42.1■■■■■ 4.33
FAM213B-214ENST00000498083 PEG3Q9GZU2 1588 aa42.05■■■■■ 4.32
FAM213B-214ENST00000498083 BAZ1BQ9UIG0 1483 aaKnown RBP42■■■■■ 4.31
FAM213B-214ENST00000498083 WIZO95785 1651 aa41.71■■■■■ 4.27
FAM213B-214ENST00000498083 RSF1Q96T23 1441 aaPredicted RBP41.52■■■■■ 4.24
FAM213B-214ENST00000498083 ERCC6Q03468 1493 aa41.43■■■■■ 4.22
FAM213B-214ENST00000498083 NESP48681 1621 aa41.4■■■■■ 4.22
FAM213B-214ENST00000498083 LAMC3Q9Y6N6 1575 aa41.31■■■■■ 4.2
FAM213B-214ENST00000498083 TOP2AP11388 1531 aaKnown RBP41.21■■■■■ 4.19
FAM213B-214ENST00000498083 CADPSQ9ULU8 1353 aa41.1■■■■■ 4.17
FAM213B-214ENST00000498083 PDS5BQ9NTI5 1447 aa41.05■■■■■ 4.16
FAM213B-214ENST00000498083 CUX2O14529 1486 aa41.03■■■■■ 4.16
FAM213B-214ENST00000498083 KIF21AQ7Z4S6 1674 aa40.98■■■■■ 4.15
FAM213B-214ENST00000498083 THOC2Q8NI27 1593 aaKnown RBP40.83■■■■■ 4.13
FAM213B-214ENST00000498083 CFTRP13569 1480 aa40.77■■■■■ 4.12
FAM213B-214ENST00000498083 CCDC88BA6NC98 1476 aa40.72■■■■■ 4.11
FAM213B-214ENST00000498083 FANCD2Q9BXW9 1451 aa40.64■■■■■ 4.1
FAM213B-214ENST00000498083 CEP164Q9UPV0 1460 aa40.64■■■■■ 4.1
FAM213B-214ENST00000498083 MRC2Q9UBG0 1479 aa40.61■■■■■ 4.09
FAM213B-214ENST00000498083 PRDM2Q13029 1718 aa40.58■■■■■ 4.09
FAM213B-214ENST00000498083 WDR62O43379 1518 aa40.47■■■■■ 4.07
FAM213B-214ENST00000498083 SUPT5HO00267 1087 aaKnown RBP40.4■■■■■ 4.06
FAM213B-214ENST00000498083 URB2Q14146 1524 aaKnown RBP40.21■■■■■ 4.03
FAM213B-214ENST00000498083 DNAJC5Q9H3Z4 198 aa40.1■■■■■ 4.01
FAM213B-214ENST00000498083 ABCC8Q09428 1581 aa39.99■■■■□ 3.99
FAM213B-214ENST00000498083 TOPBP1Q92547 1522 aa39.96■■■■□ 3.99
FAM213B-214ENST00000498083 DNMBPQ6XZF7 1577 aa39.89■■■■□ 3.98
FAM213B-214ENST00000498083 IFT140Q96RY7 1462 aa39.78■■■■□ 3.96
FAM213B-214ENST00000498083 ZNF608Q9ULD9 1512 aaPredicted RBP39.58■■■■□ 3.93
FAM213B-214ENST00000498083 POLA1P09884 1462 aaPredicted RBP39.57■■■■□ 3.93
FAM213B-214ENST00000498083 CUX1P39880 1505 aa39.53■■■■□ 3.92
FAM213B-214ENST00000498083 TARBP1Q13395 1621 aaKnown RBP39.52■■■■□ 3.92
FAM213B-214ENST00000498083 FGD5Q6ZNL6 1462 aa39.47■■■■□ 3.91
FAM213B-214ENST00000498083 SOGA1O94964 1423 aa39.47■■■■□ 3.91
FAM213B-214ENST00000498083 EIF4G3O43432 1585 aaKnown RBP39.46■■■■□ 3.91
FAM213B-214ENST00000498083 RAD54L2Q9Y4B4 1467 aa39.43■■■■□ 3.9
FAM213B-214ENST00000498083 AQRO60306 1485 aaKnown RBP eCLIP39.37■■■■□ 3.896e-7■■■□□ 18.4
FAM213B-214ENST00000498083 OSCARQ8IYS5 282 aa39.35■■■■□ 3.89
FAM213B-214ENST00000498083 TDRD9Q8NDG6 1382 aaKnown RBP39.26■■■■□ 3.88
FAM213B-214ENST00000498083 WDR97A6NE52 1622 aa39.23■■■■□ 3.87
FAM213B-214ENST00000498083 WRNQ14191 1432 aaPredicted RBP eCLIP39.22■■■■□ 3.87
FAM213B-214ENST00000498083 TOP2BQ02880 1626 aa39.15■■■■□ 3.86
FAM213B-214ENST00000498083 BIVM-ERCC5R4GMW8 1640 aa39.15■■■■□ 3.86
FAM213B-214ENST00000498083 SYNJ1O43426 1573 aa39.1■■■■□ 3.85
FAM213B-214ENST00000498083 CHD1O14646 1710 aa39.08■■■■□ 3.85
FAM213B-214ENST00000498083 FBLN2P98095 1184 aa39.06■■■■□ 3.84
FAM213B-214ENST00000498083 ABCA10Q8WWZ4 1543 aa39.05■■■■□ 3.84
FAM213B-214ENST00000498083 GRIN2BQ13224 1484 aa39.02■■■■□ 3.84
FAM213B-214ENST00000498083 GAPVD1Q14C86 1478 aa38.99■■■■□ 3.83
FAM213B-214ENST00000498083 SNAPC4Q5SXM2 1469 aa38.99■■■■□ 3.83
FAM213B-214ENST00000498083 PBRM1Q86U86 1689 aa38.98■■■■□ 3.83
FAM213B-214ENST00000498083 MAGI1Q96QZ7 1491 aaPredicted RBP38.94■■■■□ 3.82
FAM213B-214ENST00000498083 ABCA5Q8WWZ7 1642 aa38.92■■■■□ 3.82
FAM213B-214ENST00000498083 CHMP7Q8WUX9 453 aaPredicted RBP38.89■■■■□ 3.82
FAM213B-214ENST00000498083 SYNJ2O15056 1496 aa38.79■■■■□ 3.8
FAM213B-214ENST00000498083 TRIM41Q8WV44 630 aa38.76■■■■□ 3.8
FAM213B-214ENST00000498083 RIMBP3CA6NJZ7 1639 aa38.7■■■■□ 3.79
FAM213B-214ENST00000498083 RIMBP3BA6NNM3 1639 aa38.7■■■■□ 3.79
FAM213B-214ENST00000498083 RIMBP3Q9UFD9 1639 aa38.7■■■■□ 3.79
FAM213B-214ENST00000498083 ARHGEF11O15085 1522 aa38.63■■■■□ 3.78
FAM213B-214ENST00000498083 ERICH3Q5RHP9 1530 aa38.61■■■■□ 3.77
FAM213B-214ENST00000498083 ADAMTS12P58397 1594 aa38.57■■■■□ 3.77
FAM213B-214ENST00000498083 CLASP1Q7Z460 1538 aa38.54■■■■□ 3.76
FAM213B-214ENST00000498083 FHAD1B1AJZ9 1412 aa38.52■■■■□ 3.76
FAM213B-214ENST00000498083 GRIN2AQ12879 1464 aa38.5■■■■□ 3.75
FAM213B-214ENST00000498083 KIF27Q86VH2 1401 aa38.44■■■■□ 3.74
FAM213B-214ENST00000498083 CYB5RLQ6IPT4 315 aa38.37■■■■□ 3.73
FAM213B-214ENST00000498083 CEP170Q5SW79 1584 aa38.31■■■■□ 3.72
FAM213B-214ENST00000498083 NUP160Q12769 1436 aa38.3■■■■□ 3.72
FAM213B-214ENST00000498083 ARAP1Q96P48 1450 aa38.28■■■■□ 3.72
FAM213B-214ENST00000498083 IGF1RP08069 1367 aa38.26■■■■□ 3.72
FAM213B-214ENST00000498083 CUL7Q14999 1698 aa38.25■■■■□ 3.71
FAM213B-214ENST00000498083 CARMIL1Q5VZK9 1371 aa38.07■■■■□ 3.69
FAM213B-214ENST00000498083 SHROOM2Q13796 1616 aa38.07■■■■□ 3.68
FAM213B-214ENST00000498083 RUSC2Q8N2Y8 1516 aa38.01■■■■□ 3.67
FAM213B-214ENST00000498083 JPH4Q96JJ6 628 aa38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms