RNA–Protein interactions for RNA: ENST00000497987.1

NUB1-211, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 2

Gene NUB1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-211ENST00000497987 AEBP2Q6ZN18 517 aaPredicted RBP28.73■■■□□ 2.19
NUB1-211ENST00000497987 CHIC1Q5VXU3 224 aa26.81■■□□□ 1.88
NUB1-211ENST00000497987 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
NUB1-211ENST00000497987 PHF23Q9BUL5 403 aaPredicted RBP24.15■■□□□ 1.46
NUB1-211ENST00000497987 FOXD1Q16676 465 aa22.94■■□□□ 1.26
NUB1-211ENST00000497987 NISCHQ9Y2I1 1504 aa21.93■■□□□ 1.1
NUB1-211ENST00000497987 POTEDQ86YR6 584 aa21.88■■□□□ 1.09
NUB1-211ENST00000497987 MSH5O43196 834 aa21.58■■□□□ 1.05
NUB1-211ENST00000497987 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
NUB1-211ENST00000497987 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
NUB1-211ENST00000497987 PPP6R1Q9UPN7 881 aa21.14■□□□□ 0.97
NUB1-211ENST00000497987 ADRA2BP18089 450 aa21.02■□□□□ 0.96
NUB1-211ENST00000497987 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
NUB1-211ENST00000497987 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
NUB1-211ENST00000497987 ABCC9O60706 1549 aa19.44■□□□□ 0.7
NUB1-211ENST00000497987 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
NUB1-211ENST00000497987 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
NUB1-211ENST00000497987 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
NUB1-211ENST00000497987 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
NUB1-211ENST00000497987 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
NUB1-211ENST00000497987 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
NUB1-211ENST00000497987 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
NUB1-211ENST00000497987 HOXD11P31277 338 aaPredicted RBP18.5■□□□□ 0.55
NUB1-211ENST00000497987 NACADO15069 1562 aa18.44■□□□□ 0.54
NUB1-211ENST00000497987 RNF39Q9H2S5 420 aa18.42■□□□□ 0.54
NUB1-211ENST00000497987 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
NUB1-211ENST00000497987 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
NUB1-211ENST00000497987 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
NUB1-211ENST00000497987 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
NUB1-211ENST00000497987 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
NUB1-211ENST00000497987 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
NUB1-211ENST00000497987 C1QBPQ07021 282 aaKnown RBP18.09■□□□□ 0.49
NUB1-211ENST00000497987 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
NUB1-211ENST00000497987 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.48
NUB1-211ENST00000497987 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
NUB1-211ENST00000497987 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
NUB1-211ENST00000497987 KCNA4P22459 653 aa17.77■□□□□ 0.44
NUB1-211ENST00000497987 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
NUB1-211ENST00000497987 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
NUB1-211ENST00000497987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.41
NUB1-211ENST00000497987 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
NUB1-211ENST00000497987 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
NUB1-211ENST00000497987 CECR2Q9BXF3 1484 aa17.47■□□□□ 0.39
NUB1-211ENST00000497987 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
NUB1-211ENST00000497987 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
NUB1-211ENST00000497987 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
NUB1-211ENST00000497987 DSG3P32926 999 aa17.1■□□□□ 0.33
NUB1-211ENST00000497987 CAPN15O75808 1086 aa17.06■□□□□ 0.32
NUB1-211ENST00000497987 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
NUB1-211ENST00000497987 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
NUB1-211ENST00000497987 POTEHQ6S545 545 aa17.04■□□□□ 0.32
NUB1-211ENST00000497987 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
NUB1-211ENST00000497987 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
NUB1-211ENST00000497987 SMARCA2P51531 1590 aa16.97■□□□□ 0.31
NUB1-211ENST00000497987 MROH2BQ7Z745 1585 aa16.93■□□□□ 0.3
NUB1-211ENST00000497987 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
NUB1-211ENST00000497987 BAZ1BQ9UIG0 1483 aaKnown RBP16.87■□□□□ 0.29
NUB1-211ENST00000497987 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
NUB1-211ENST00000497987 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
NUB1-211ENST00000497987 SLC4A2P04920 1241 aa16.8■□□□□ 0.28
NUB1-211ENST00000497987 NESP48681 1621 aa16.77■□□□□ 0.27
NUB1-211ENST00000497987 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
NUB1-211ENST00000497987 WIZO95785 1651 aa16.72■□□□□ 0.27
NUB1-211ENST00000497987 TRHP20396 242 aaPredicted RBP16.68■□□□□ 0.26
NUB1-211ENST00000497987 RSF1Q96T23 1441 aaPredicted RBP16.66■□□□□ 0.26
NUB1-211ENST00000497987 ABCB7O75027 752 aa16.65■□□□□ 0.26
NUB1-211ENST00000497987 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
NUB1-211ENST00000497987 CUX2O14529 1486 aa16.61■□□□□ 0.25
NUB1-211ENST00000497987 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
NUB1-211ENST00000497987 APLP2Q06481 763 aa16.59■□□□□ 0.25
NUB1-211ENST00000497987 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
NUB1-211ENST00000497987 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
NUB1-211ENST00000497987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
NUB1-211ENST00000497987 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
NUB1-211ENST00000497987 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
NUB1-211ENST00000497987 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
NUB1-211ENST00000497987 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
NUB1-211ENST00000497987 DNAJC5Q9H3Z4 198 aa16.48■□□□□ 0.23
NUB1-211ENST00000497987 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
NUB1-211ENST00000497987 ZBTB22O15209 634 aa16.4■□□□□ 0.22
NUB1-211ENST00000497987 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
NUB1-211ENST00000497987 CFTRP13569 1480 aa16.4■□□□□ 0.22
NUB1-211ENST00000497987 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
NUB1-211ENST00000497987 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
NUB1-211ENST00000497987 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
NUB1-211ENST00000497987 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
NUB1-211ENST00000497987 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
NUB1-211ENST00000497987 WDR62O43379 1518 aa16.29■□□□□ 0.2
NUB1-211ENST00000497987 FOXD4L1Q9NU39 408 aa16.27■□□□□ 0.2
NUB1-211ENST00000497987 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
NUB1-211ENST00000497987 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
NUB1-211ENST00000497987 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
NUB1-211ENST00000497987 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
NUB1-211ENST00000497987 POLA2Q14181 598 aa16.15■□□□□ 0.18
NUB1-211ENST00000497987 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
NUB1-211ENST00000497987 MYCNP04198 464 aaPredicted RBP16.1■□□□□ 0.17
NUB1-211ENST00000497987 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
NUB1-211ENST00000497987 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
NUB1-211ENST00000497987 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
NUB1-211ENST00000497987 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms