RNA–Protein interactions for RNA: ENST00000497611.1

CDC7-205, Transcript of cell division cycle 7, humanhuman

TSL 3

Gene CDC7, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-205ENST00000497611 NISCHQ9Y2I1 1504 aa34.38■■■■□ 3.09
CDC7-205ENST00000497611 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
CDC7-205ENST00000497611 ABCC9O60706 1549 aa30.63■■■□□ 2.49
CDC7-205ENST00000497611 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
CDC7-205ENST00000497611 DCAF8L2P0C7V8 631 aa29.1■■■□□ 2.25
CDC7-205ENST00000497611 NACADO15069 1562 aa28.97■■■□□ 2.23
CDC7-205ENST00000497611 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
CDC7-205ENST00000497611 PABPN1Q86U42 306 aaKnown RBP eCLIP28.63■■■□□ 2.17
CDC7-205ENST00000497611 MYO15BQ96JP2 1530 aa28.61■■■□□ 2.17
CDC7-205ENST00000497611 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
CDC7-205ENST00000497611 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
CDC7-205ENST00000497611 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
CDC7-205ENST00000497611 BICRAQ9NZM4 1560 aa28.32■■■□□ 2.12
CDC7-205ENST00000497611 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
CDC7-205ENST00000497611 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
CDC7-205ENST00000497611 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
CDC7-205ENST00000497611 EIF4G1Q04637 1599 aaKnown RBP27.59■■■□□ 2.01
CDC7-205ENST00000497611 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
CDC7-205ENST00000497611 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
CDC7-205ENST00000497611 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
CDC7-205ENST00000497611 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
CDC7-205ENST00000497611 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
CDC7-205ENST00000497611 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
CDC7-205ENST00000497611 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
CDC7-205ENST00000497611 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
CDC7-205ENST00000497611 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
CDC7-205ENST00000497611 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
CDC7-205ENST00000497611 ERCC6Q03468 1493 aa26.38■■□□□ 1.81
CDC7-205ENST00000497611 NESP48681 1621 aa26.38■■□□□ 1.81
CDC7-205ENST00000497611 CUX2O14529 1486 aa26.21■■□□□ 1.79
CDC7-205ENST00000497611 WIZO95785 1651 aa26.2■■□□□ 1.78
CDC7-205ENST00000497611 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
CDC7-205ENST00000497611 DNAJC5Q9H3Z4 198 aa26.07■■□□□ 1.76
CDC7-205ENST00000497611 RSF1Q96T23 1441 aaPredicted RBP26.06■■□□□ 1.76
CDC7-205ENST00000497611 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
CDC7-205ENST00000497611 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
CDC7-205ENST00000497611 THOC2Q8NI27 1593 aaKnown RBP25.96■■□□□ 1.75
CDC7-205ENST00000497611 KIF21AQ7Z4S6 1674 aa25.94■■□□□ 1.74
CDC7-205ENST00000497611 TOP2AP11388 1531 aaKnown RBP25.84■■□□□ 1.73
CDC7-205ENST00000497611 MRC2Q9UBG0 1479 aa25.76■■□□□ 1.71
CDC7-205ENST00000497611 CFTRP13569 1480 aa25.74■■□□□ 1.71
CDC7-205ENST00000497611 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
CDC7-205ENST00000497611 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
CDC7-205ENST00000497611 WDR62O43379 1518 aa25.66■■□□□ 1.7
CDC7-205ENST00000497611 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
CDC7-205ENST00000497611 URB2Q14146 1524 aaKnown RBP25.5■■□□□ 1.67
CDC7-205ENST00000497611 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
CDC7-205ENST00000497611 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
CDC7-205ENST00000497611 ZNF608Q9ULD9 1512 aaPredicted RBP25.18■■□□□ 1.62
CDC7-205ENST00000497611 IFT140Q96RY7 1462 aa25.17■■□□□ 1.62
CDC7-205ENST00000497611 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
CDC7-205ENST00000497611 OSCARQ8IYS5 282 aa25.15■■□□□ 1.62
CDC7-205ENST00000497611 ABCC8Q09428 1581 aa25.14■■□□□ 1.62
CDC7-205ENST00000497611 DNMBPQ6XZF7 1577 aa25.13■■□□□ 1.61
CDC7-205ENST00000497611 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
CDC7-205ENST00000497611 AQRO60306 1485 aaKnown RBP eCLIP25■■□□□ 1.59
CDC7-205ENST00000497611 POLA1P09884 1462 aaPredicted RBP25■■□□□ 1.59
CDC7-205ENST00000497611 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
CDC7-205ENST00000497611 RAD54L2Q9Y4B4 1467 aa24.97■■□□□ 1.59
CDC7-205ENST00000497611 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
CDC7-205ENST00000497611 SOGA1O94964 1423 aa24.93■■□□□ 1.58
CDC7-205ENST00000497611 CUX1P39880 1505 aa24.9■■□□□ 1.58
CDC7-205ENST00000497611 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
CDC7-205ENST00000497611 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
CDC7-205ENST00000497611 FBLN2P98095 1184 aa24.84■■□□□ 1.57
CDC7-205ENST00000497611 RIMBP3CA6NJZ7 1639 aa24.73■■□□□ 1.55
CDC7-205ENST00000497611 RIMBP3BA6NNM3 1639 aa24.73■■□□□ 1.55
CDC7-205ENST00000497611 RIMBP3Q9UFD9 1639 aa24.73■■□□□ 1.55
CDC7-205ENST00000497611 CHD1O14646 1710 aa24.72■■□□□ 1.55
CDC7-205ENST00000497611 SNAPC4Q5SXM2 1469 aa24.7■■□□□ 1.54
CDC7-205ENST00000497611 ARHGEF11O15085 1522 aa24.69■■□□□ 1.54
CDC7-205ENST00000497611 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
CDC7-205ENST00000497611 WDR97A6NE52 1622 aa24.64■■□□□ 1.53
CDC7-205ENST00000497611 GRIN2BQ13224 1484 aa24.64■■□□□ 1.53
CDC7-205ENST00000497611 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
CDC7-205ENST00000497611 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
CDC7-205ENST00000497611 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
CDC7-205ENST00000497611 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
CDC7-205ENST00000497611 WRNQ14191 1432 aaPredicted RBP eCLIP24.56■■□□□ 1.52
CDC7-205ENST00000497611 SYNJ2O15056 1496 aa24.53■■□□□ 1.52
CDC7-205ENST00000497611 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
CDC7-205ENST00000497611 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
CDC7-205ENST00000497611 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
CDC7-205ENST00000497611 PBRM1Q86U86 1689 aa24.49■■□□□ 1.51
CDC7-205ENST00000497611 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
CDC7-205ENST00000497611 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
CDC7-205ENST00000497611 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
CDC7-205ENST00000497611 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
CDC7-205ENST00000497611 ADAMTS12P58397 1594 aa24.3■■□□□ 1.48
CDC7-205ENST00000497611 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
CDC7-205ENST00000497611 TRHP20396 242 aaPredicted RBP24.26■■□□□ 1.47
CDC7-205ENST00000497611 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
CDC7-205ENST00000497611 NUP160Q12769 1436 aa24.24■■□□□ 1.47
CDC7-205ENST00000497611 CEP170Q5SW79 1584 aa24.24■■□□□ 1.47
CDC7-205ENST00000497611 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
CDC7-205ENST00000497611 IGF1RP08069 1367 aa24.1■■□□□ 1.45
CDC7-205ENST00000497611 JPH4Q96JJ6 628 aa24.07■■□□□ 1.44
CDC7-205ENST00000497611 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
CDC7-205ENST00000497611 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
CDC7-205ENST00000497611 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms