RNA–Protein interactions for RNA: ENST00000497602.1

PRKCE-214, Transcript of protein kinase C epsilon, humanhuman

TSL 3

Gene PRKCE, Length 755 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCE-214ENST00000497602 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
PRKCE-214ENST00000497602 ABCC9O60706 1549 aa29.91■■■□□ 2.38
PRKCE-214ENST00000497602 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.37
PRKCE-214ENST00000497602 RB1CC1Q8TDY2 1594 aa28.48■■■□□ 2.15
PRKCE-214ENST00000497602 NACADO15069 1562 aa28.29■■■□□ 2.12
PRKCE-214ENST00000497602 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
PRKCE-214ENST00000497602 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
PRKCE-214ENST00000497602 DCAF8L2P0C7V8 631 aa27.93■■■□□ 2.06
PRKCE-214ENST00000497602 PABPN1Q86U42 306 aaKnown RBP eCLIP27.8■■■□□ 2.04
PRKCE-214ENST00000497602 UNC13AQ9UPW8 1703 aa27.8■■■□□ 2.04
PRKCE-214ENST00000497602 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
PRKCE-214ENST00000497602 ZCCHC6Q5VYS8 1495 aaKnown RBP27.51■■□□□ 1.99
PRKCE-214ENST00000497602 DCAF1Q9Y4B6 1507 aa27.5■■□□□ 1.99
PRKCE-214ENST00000497602 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
PRKCE-214ENST00000497602 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
PRKCE-214ENST00000497602 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
PRKCE-214ENST00000497602 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
PRKCE-214ENST00000497602 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
PRKCE-214ENST00000497602 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
PRKCE-214ENST00000497602 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
PRKCE-214ENST00000497602 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
PRKCE-214ENST00000497602 CUX2O14529 1486 aa25.92■■□□□ 1.74
PRKCE-214ENST00000497602 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
PRKCE-214ENST00000497602 HMGXB3Q12766 1538 aa25.92■■□□□ 1.74
PRKCE-214ENST00000497602 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
PRKCE-214ENST00000497602 ERCC6Q03468 1493 aa25.84■■□□□ 1.73
PRKCE-214ENST00000497602 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
PRKCE-214ENST00000497602 PEG3Q9GZU2 1588 aa25.74■■□□□ 1.71
PRKCE-214ENST00000497602 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
PRKCE-214ENST00000497602 NESP48681 1621 aa25.66■■□□□ 1.7
PRKCE-214ENST00000497602 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
PRKCE-214ENST00000497602 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
PRKCE-214ENST00000497602 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
PRKCE-214ENST00000497602 PDS5BQ9NTI5 1447 aa25.38■■□□□ 1.65
PRKCE-214ENST00000497602 KIF21AQ7Z4S6 1674 aa25.33■■□□□ 1.65
PRKCE-214ENST00000497602 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
PRKCE-214ENST00000497602 WIZO95785 1651 aa25.22■■□□□ 1.63
PRKCE-214ENST00000497602 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
PRKCE-214ENST00000497602 WDR62O43379 1518 aa25.12■■□□□ 1.61
PRKCE-214ENST00000497602 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
PRKCE-214ENST00000497602 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
PRKCE-214ENST00000497602 CFTRP13569 1480 aa25■■□□□ 1.59
PRKCE-214ENST00000497602 FANCD2Q9BXW9 1451 aa24.98■■□□□ 1.59
PRKCE-214ENST00000497602 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
PRKCE-214ENST00000497602 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
PRKCE-214ENST00000497602 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
PRKCE-214ENST00000497602 PRDM2Q13029 1718 aa24.7■■□□□ 1.54
PRKCE-214ENST00000497602 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
PRKCE-214ENST00000497602 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
PRKCE-214ENST00000497602 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
PRKCE-214ENST00000497602 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
PRKCE-214ENST00000497602 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
PRKCE-214ENST00000497602 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
PRKCE-214ENST00000497602 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
PRKCE-214ENST00000497602 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
PRKCE-214ENST00000497602 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
PRKCE-214ENST00000497602 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
PRKCE-214ENST00000497602 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
PRKCE-214ENST00000497602 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
PRKCE-214ENST00000497602 ARHGEF11O15085 1522 aa24.28■■□□□ 1.48
PRKCE-214ENST00000497602 POLA1P09884 1462 aaPredicted RBP24.25■■□□□ 1.47
PRKCE-214ENST00000497602 AQRO60306 1485 aaKnown RBP eCLIP24.24■■□□□ 1.47
PRKCE-214ENST00000497602 CHD1O14646 1710 aa24.16■■□□□ 1.46
PRKCE-214ENST00000497602 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
PRKCE-214ENST00000497602 SOGA1O94964 1423 aa24.12■■□□□ 1.45
PRKCE-214ENST00000497602 WDR97A6NE52 1622 aa24.11■■□□□ 1.45
PRKCE-214ENST00000497602 TDRD9Q8NDG6 1382 aaKnown RBP24.06■■□□□ 1.44
PRKCE-214ENST00000497602 CYB5RLQ6IPT4 315 aa24.06■■□□□ 1.44
PRKCE-214ENST00000497602 FGD5Q6ZNL6 1462 aa24.06■■□□□ 1.44
PRKCE-214ENST00000497602 FBLN2P98095 1184 aa24.04■■□□□ 1.44
PRKCE-214ENST00000497602 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
PRKCE-214ENST00000497602 CUX1P39880 1505 aa24.03■■□□□ 1.44
PRKCE-214ENST00000497602 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
PRKCE-214ENST00000497602 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
PRKCE-214ENST00000497602 CLASP1Q7Z460 1538 aa23.95■■□□□ 1.43
PRKCE-214ENST00000497602 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
PRKCE-214ENST00000497602 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
PRKCE-214ENST00000497602 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
PRKCE-214ENST00000497602 SYNJ2O15056 1496 aa23.89■■□□□ 1.42
PRKCE-214ENST00000497602 GAPVD1Q14C86 1478 aa23.83■■□□□ 1.41
PRKCE-214ENST00000497602 ABCA10Q8WWZ4 1543 aa23.82■■□□□ 1.4
PRKCE-214ENST00000497602 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
PRKCE-214ENST00000497602 TRHP20396 242 aaPredicted RBP23.79■■□□□ 1.4
PRKCE-214ENST00000497602 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
PRKCE-214ENST00000497602 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
PRKCE-214ENST00000497602 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
PRKCE-214ENST00000497602 GRIN2AQ12879 1464 aa23.63■■□□□ 1.37
PRKCE-214ENST00000497602 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
PRKCE-214ENST00000497602 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
PRKCE-214ENST00000497602 ADAMTS12P58397 1594 aa23.6■■□□□ 1.37
PRKCE-214ENST00000497602 NUP160Q12769 1436 aa23.59■■□□□ 1.37
PRKCE-214ENST00000497602 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
PRKCE-214ENST00000497602 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
PRKCE-214ENST00000497602 ERICH3Q5RHP9 1530 aa23.52■■□□□ 1.36
PRKCE-214ENST00000497602 ERCC6L2Q5T890 1561 aa23.52■■□□□ 1.36
PRKCE-214ENST00000497602 SHROOM2Q13796 1616 aa23.5■■□□□ 1.35
PRKCE-214ENST00000497602 PRG4Q92954 1404 aaPredicted RBP23.32■■□□□ 1.32
PRKCE-214ENST00000497602 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
PRKCE-214ENST00000497602 RUSC2Q8N2Y8 1516 aa23.27■■□□□ 1.32
PRKCE-214ENST00000497602 KIF13AQ9H1H9 1805 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms