RNA–Protein interactions for RNA: ENST00000497323.5

PSMD6-212, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 5

Gene PSMD6, Length 717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-212ENST00000497323 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
PSMD6-212ENST00000497323 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
PSMD6-212ENST00000497323 ABCC9O60706 1549 aa34.28■■■■□ 3.08
PSMD6-212ENST00000497323 ZCCHC6Q5VYS8 1495 aaKnown RBP33.32■■■□□ 2.92
PSMD6-212ENST00000497323 DCAF8L2P0C7V8 631 aa33.32■■■□□ 2.92
PSMD6-212ENST00000497323 NACADO15069 1562 aa33.13■■■□□ 2.89
PSMD6-212ENST00000497323 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
PSMD6-212ENST00000497323 MYO15BQ96JP2 1530 aa33.04■■■□□ 2.88
PSMD6-212ENST00000497323 DCAF1Q9Y4B6 1507 aa33.03■■■□□ 2.88
PSMD6-212ENST00000497323 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
PSMD6-212ENST00000497323 SCRIBQ14160 1630 aa32.26■■■□□ 2.76
PSMD6-212ENST00000497323 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
PSMD6-212ENST00000497323 BICRAQ9NZM4 1560 aa32.07■■■□□ 2.72
PSMD6-212ENST00000497323 SHROOM4Q9ULL8 1493 aa31.81■■■□□ 2.68
PSMD6-212ENST00000497323 DNAJC5BQ9UF47 199 aa31.2■■■□□ 2.59
PSMD6-212ENST00000497323 EIF4G1Q04637 1599 aaKnown RBP31.2■■■□□ 2.58
PSMD6-212ENST00000497323 CECR2Q9BXF3 1484 aa31.1■■■□□ 2.57
PSMD6-212ENST00000497323 CC2D2AQ9P2K1 1620 aa30.98■■■□□ 2.55
PSMD6-212ENST00000497323 BAZ1AQ9NRL2 1556 aaPredicted RBP30.91■■■□□ 2.54
PSMD6-212ENST00000497323 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
PSMD6-212ENST00000497323 MROH2BQ7Z745 1585 aa30.79■■■□□ 2.52
PSMD6-212ENST00000497323 ATAD2BQ9ULI0 1458 aa30.67■■■□□ 2.5
PSMD6-212ENST00000497323 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
PSMD6-212ENST00000497323 NCAPD3P42695 1498 aa30.6■■■□□ 2.49
PSMD6-212ENST00000497323 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
PSMD6-212ENST00000497323 PEG3Q9GZU2 1588 aa30.57■■■□□ 2.48
PSMD6-212ENST00000497323 WIZO95785 1651 aa30.46■■■□□ 2.47
PSMD6-212ENST00000497323 HMGXB3Q12766 1538 aa30.44■■■□□ 2.46
PSMD6-212ENST00000497323 BAZ1BQ9UIG0 1483 aaKnown RBP30.43■■■□□ 2.46
PSMD6-212ENST00000497323 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
PSMD6-212ENST00000497323 SUPT5HO00267 1087 aaKnown RBP30.13■■■□□ 2.41
PSMD6-212ENST00000497323 CCDC88BA6NC98 1476 aa29.83■■■□□ 2.37
PSMD6-212ENST00000497323 NESP48681 1621 aa29.77■■■□□ 2.36
PSMD6-212ENST00000497323 CADPSQ9ULU8 1353 aa29.75■■■□□ 2.35
PSMD6-212ENST00000497323 LAMC3Q9Y6N6 1575 aa29.7■■■□□ 2.35
PSMD6-212ENST00000497323 CFTRP13569 1480 aa29.61■■■□□ 2.33
PSMD6-212ENST00000497323 PDS5BQ9NTI5 1447 aa29.53■■■□□ 2.32
PSMD6-212ENST00000497323 ERCC6Q03468 1493 aa29.5■■■□□ 2.31
PSMD6-212ENST00000497323 FANCD2Q9BXW9 1451 aa29.38■■■□□ 2.29
PSMD6-212ENST00000497323 KIF21AQ7Z4S6 1674 aa29.36■■■□□ 2.29
PSMD6-212ENST00000497323 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
PSMD6-212ENST00000497323 CEP164Q9UPV0 1460 aa29.3■■■□□ 2.28
PSMD6-212ENST00000497323 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
PSMD6-212ENST00000497323 THOC2Q8NI27 1593 aaKnown RBP29.18■■■□□ 2.26
PSMD6-212ENST00000497323 URB2Q14146 1524 aaKnown RBP29.07■■■□□ 2.24
PSMD6-212ENST00000497323 WDR62O43379 1518 aa29.06■■■□□ 2.24
PSMD6-212ENST00000497323 CUX2O14529 1486 aa29.05■■■□□ 2.24
PSMD6-212ENST00000497323 ABCC8Q09428 1581 aa28.96■■■□□ 2.23
PSMD6-212ENST00000497323 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
PSMD6-212ENST00000497323 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
PSMD6-212ENST00000497323 CUX1P39880 1505 aa28.86■■■□□ 2.21
PSMD6-212ENST00000497323 WRNQ14191 1432 aaPredicted RBP eCLIP28.82■■■□□ 2.2
PSMD6-212ENST00000497323 POLA1P09884 1462 aaPredicted RBP28.72■■■□□ 2.19
PSMD6-212ENST00000497323 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
PSMD6-212ENST00000497323 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
PSMD6-212ENST00000497323 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
PSMD6-212ENST00000497323 IFT140Q96RY7 1462 aa28.68■■■□□ 2.18
PSMD6-212ENST00000497323 BIVM-ERCC5R4GMW8 1640 aa28.66■■■□□ 2.18
PSMD6-212ENST00000497323 SOGA1O94964 1423 aa28.65■■■□□ 2.18
PSMD6-212ENST00000497323 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
PSMD6-212ENST00000497323 TARBP1Q13395 1621 aaKnown RBP28.58■■■□□ 2.17
PSMD6-212ENST00000497323 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
PSMD6-212ENST00000497323 TDRD9Q8NDG6 1382 aaKnown RBP28.45■■■□□ 2.14
PSMD6-212ENST00000497323 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
PSMD6-212ENST00000497323 AQRO60306 1485 aaKnown RBP eCLIP28.44■■■□□ 2.146e-6■■■■□ 23.2
PSMD6-212ENST00000497323 TRIM41Q8WV44 630 aa28.42■■■□□ 2.14
PSMD6-212ENST00000497323 WDR97A6NE52 1622 aa28.39■■■□□ 2.13
PSMD6-212ENST00000497323 EIF4G3O43432 1585 aaKnown RBP28.38■■■□□ 2.13
PSMD6-212ENST00000497323 CHIC1Q5VXU3 224 aa28.32■■■□□ 2.12
PSMD6-212ENST00000497323 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
PSMD6-212ENST00000497323 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
PSMD6-212ENST00000497323 GRIN2BQ13224 1484 aa28.25■■■□□ 2.11
PSMD6-212ENST00000497323 KIF27Q86VH2 1401 aa28.19■■■□□ 2.1
PSMD6-212ENST00000497323 SNAPC4Q5SXM2 1469 aa28.16■■■□□ 2.1
PSMD6-212ENST00000497323 PBRM1Q86U86 1689 aa28.15■■■□□ 2.1
PSMD6-212ENST00000497323 MAGI1Q96QZ7 1491 aaPredicted RBP28.12■■■□□ 2.09
PSMD6-212ENST00000497323 ERICH3Q5RHP9 1530 aa28.09■■■□□ 2.09
PSMD6-212ENST00000497323 FBLN2P98095 1184 aa28.06■■■□□ 2.08
PSMD6-212ENST00000497323 IGF1RP08069 1367 aa28.06■■■□□ 2.08
PSMD6-212ENST00000497323 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
PSMD6-212ENST00000497323 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
PSMD6-212ENST00000497323 SYNJ2O15056 1496 aa28.02■■■□□ 2.08
PSMD6-212ENST00000497323 FHAD1B1AJZ9 1412 aa28■■■□□ 2.07
PSMD6-212ENST00000497323 OSCARQ8IYS5 282 aa27.98■■■□□ 2.07
PSMD6-212ENST00000497323 ADAMTS12P58397 1594 aa27.97■■■□□ 2.07
PSMD6-212ENST00000497323 CHD1O14646 1710 aa27.95■■■□□ 2.07
PSMD6-212ENST00000497323 CARMIL1Q5VZK9 1371 aa27.9■■■□□ 2.06
PSMD6-212ENST00000497323 CUL7Q14999 1698 aa27.88■■■□□ 2.05
PSMD6-212ENST00000497323 EEA1Q15075 1411 aa27.87■■■□□ 2.05
PSMD6-212ENST00000497323 GRIN2AQ12879 1464 aa27.87■■■□□ 2.05
PSMD6-212ENST00000497323 FAM9AQ8IZU1 332 aaPredicted RBP27.85■■■□□ 2.05
PSMD6-212ENST00000497323 CSRNP3Q8WYN3 585 aa27.85■■■□□ 2.05
PSMD6-212ENST00000497323 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
PSMD6-212ENST00000497323 RAPGEF2Q9Y4G8 1499 aa27.75■■■□□ 2.03
PSMD6-212ENST00000497323 NUP160Q12769 1436 aa27.74■■■□□ 2.03
PSMD6-212ENST00000497323 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
PSMD6-212ENST00000497323 CEP170Q5SW79 1584 aa27.71■■■□□ 2.03
PSMD6-212ENST00000497323 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
PSMD6-212ENST00000497323 KIAA0586Q9BVV6 1533 aa27.57■■■□□ 2
PSMD6-212ENST00000497323 KIF21BO75037 1637 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms